| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621613
Identifier: 116621613
GI number: 116621613
Start: 3168791
End: 3170122
Strand: Reverse
Name: 116621613
Synonym: Acid_2495
Alternate gene names: NA
Gene position: 3170122-3168791 (Counterclockwise)
Preceding gene: 116621614
Following gene: 116621611
Centisome position: 31.81
GC content: 65.02
Gene sequence:
>1332_bases ATGCCGAAAACAGCCGTCCTGTCCTGTCTATTGCTTCTGTCCCTGGCGTTCGCCGAGAGCCAAAAAAGGAAATCCCTGCC CGCGGCCCCGCCCCTACCGGAAGCCCCCGCCGCCTTCGACAACCTGAGCAACGGCATGGTGGACGACGCCACCCACCAGG CCGATCAGCTAAAATTCGATAGCATCGAAACCGTCGCCGATGGCCTCGGTCCGCTCTACAACGGGCAATCCTGCCGCGAG TGTCATCAGAACCCCACCTCGGGCGGCGCCAGCCAGATCACCGTTCTCCGCGTGGGACACCTCGGCCCCGATCATCGCTT TCAGAATCCCAACATCCCCATTAATCGCGGCACCGAGATCATCACCGGCCGCACGCTCGTCAACGATCGCGCTATTTGCC CGAGCGCCGCCTTCCCCGCCACCGACATCCAGGAGCGTGTGCCGGACTCGGAAACCGTCCGCACCACCCGCATTTCTCTC AACCTCTTAGGCGATGGCTTGATCGAAGCCGTCGCCGACCAGACTCTGATCGATCTATCGCGCAAGCAGTGCCAGAGCAC TCATGGCAAGGTCTGTGGCCTGGTGATTTACGTCCCCATCGTCGAAGCCACCGGCCAGGCCGCCGTCGGCCGCTTCGGCT GGAAGAACCAGCACGCCAGCCTGCTCTCCTTCTCCGGCGACGCCTACCTCAACGAAATGGGCATTACCACGCAGTTGTTC CCGGACGAGGTGACGAAGCTCTGCAACAACGCACCCGAGCCCAACGACACGGCCGGCCCCGACGGTCTTGCGGACATGGA CCGCTTCGCCCGCTTCGTCCGCGCATCCAAAGCGCCGCCGCGCGACACTGCCCTCGCCGCCACTCCCGCCGCCCAGACCG GATCTGCTTTATTCGATAAAGCAGGCTGCGCCGTCTGCCATGTCGCCACCCTCGCCACAGCGCCCGCAGGCCTCAAAATC AACGGCGGCGCATACACCATCCCGCCCGCGCTCGGCGGCAAGACCTTCCATCCCTTCGGCGATTTCCTCCTTCACGACGT GGGCACCGGCGATGGCATCGTGATTCCCACCGTCGAACACTACGGACGCGCCGCGCGACGGATGCCGCGCGAGTGTTCAC CCGATAATTTCCAGAGGACCCAAAATCGCGTGCGTACCGCGCCTCTCTGGGGCCTCCGCCTCCGCACCAGGCTGATGCAC GACGGCGCCTCGCTCACCCTCCGCGACGCCATCCTCCGCCACGCCGGAGAAGCCACCCAGTCCGCGCACAGTTTCCGAAG CCTGCCCCCGCGCGACCAGGAGGCCCTCCTGCAATTCCTCCGCTCGCTGTAG
Upstream 100 bases:
>100_bases CGCCCCAGTCACCGGGACCTTCCGCGGCCAGTCACGCGCCCAGATGCACTTCTCCATCTCCATGCAGGTCAAGTAGGATA GTATCTACCGAGGAGGGCAT
Downstream 100 bases:
>100_bases GGTGACTTTGGAAAGGCATTTTCTCGCAGAGACCGCAGAGATCGCAGAGAAAACCGAGGAGGCCCAACCTTCTTGCTGGT TTTCTCTGCGATCTCCGCGT
Product: thiol oxidoreductase-like protein
Products: NA
Alternate protein names: Lipoprotein; Thiol Oxidoreductase-Like; Thiol Oxidoreductase-Like Protein; Exported Protein; Signal Peptide
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MPKTAVLSCLLLLSLAFAESQKRKSLPAAPPLPEAPAAFDNLSNGMVDDATHQADQLKFDSIETVADGLGPLYNGQSCRE CHQNPTSGGASQITVLRVGHLGPDHRFQNPNIPINRGTEIITGRTLVNDRAICPSAAFPATDIQERVPDSETVRTTRISL NLLGDGLIEAVADQTLIDLSRKQCQSTHGKVCGLVIYVPIVEATGQAAVGRFGWKNQHASLLSFSGDAYLNEMGITTQLF PDEVTKLCNNAPEPNDTAGPDGLADMDRFARFVRASKAPPRDTALAATPAAQTGSALFDKAGCAVCHVATLATAPAGLKI NGGAYTIPPALGGKTFHPFGDFLLHDVGTGDGIVIPTVEHYGRAARRMPRECSPDNFQRTQNRVRTAPLWGLRLRTRLMH DGASLTLRDAILRHAGEATQSAHSFRSLPPRDQEALLQFLRSL
Sequences:
>Translated_443_residues MPKTAVLSCLLLLSLAFAESQKRKSLPAAPPLPEAPAAFDNLSNGMVDDATHQADQLKFDSIETVADGLGPLYNGQSCRE CHQNPTSGGASQITVLRVGHLGPDHRFQNPNIPINRGTEIITGRTLVNDRAICPSAAFPATDIQERVPDSETVRTTRISL NLLGDGLIEAVADQTLIDLSRKQCQSTHGKVCGLVIYVPIVEATGQAAVGRFGWKNQHASLLSFSGDAYLNEMGITTQLF PDEVTKLCNNAPEPNDTAGPDGLADMDRFARFVRASKAPPRDTALAATPAAQTGSALFDKAGCAVCHVATLATAPAGLKI NGGAYTIPPALGGKTFHPFGDFLLHDVGTGDGIVIPTVEHYGRAARRMPRECSPDNFQRTQNRVRTAPLWGLRLRTRLMH DGASLTLRDAILRHAGEATQSAHSFRSLPPRDQEALLQFLRSL >Mature_442_residues PKTAVLSCLLLLSLAFAESQKRKSLPAAPPLPEAPAAFDNLSNGMVDDATHQADQLKFDSIETVADGLGPLYNGQSCREC HQNPTSGGASQITVLRVGHLGPDHRFQNPNIPINRGTEIITGRTLVNDRAICPSAAFPATDIQERVPDSETVRTTRISLN LLGDGLIEAVADQTLIDLSRKQCQSTHGKVCGLVIYVPIVEATGQAAVGRFGWKNQHASLLSFSGDAYLNEMGITTQLFP DEVTKLCNNAPEPNDTAGPDGLADMDRFARFVRASKAPPRDTALAATPAAQTGSALFDKAGCAVCHVATLATAPAGLKIN GGAYTIPPALGGKTFHPFGDFLLHDVGTGDGIVIPTVEHYGRAARRMPRECSPDNFQRTQNRVRTAPLWGLRLRTRLMHD GASLTLRDAILRHAGEATQSAHSFRSLPPRDQEALLQFLRSL
Specific function: Unknown
COG id: COG3488
COG function: function code C; Predicted thiol oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47501; Mature: 47370
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTAVLSCLLLLSLAFAESQKRKSLPAAPPLPEAPAAFDNLSNGMVDDATHQADQLKFD CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHCCHH SIETVADGLGPLYNGQSCRECHQNPTSGGASQITVLRVGHLGPDHRFQNPNIPINRGTEI HHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEE ITGRTLVNDRAICPSAAFPATDIQERVPDSETVRTTRISLNLLGDGLIEAVADQTLIDLS EECCEEECCCCCCCCCCCCCCCHHHHCCCCHHEEEEEEEEEHHHHHHHHHHHHHHHHHHH RKQCQSTHGKVCGLVIYVPIVEATGQAAVGRFGWKNQHASLLSFSGDAYLNEMGITTQLF HHHHHHHCCCEEEEEEEEEEHHCCCCHHHHHCCCCCCCCHHEEECCCHHHHHCCCEEEEC PDEVTKLCNNAPEPNDTAGPDGLADMDRFARFVRASKAPPRDTALAATPAAQTGSALFDK HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHH AGCAVCHVATLATAPAGLKINGGAYTIPPALGGKTFHPFGDFLLHDVGTGDGIVIPTVEH CCHHHHHHHHHHCCCCCEEECCCCEECCCCCCCCCCCCHHHHHHHHCCCCCCEEECCHHH YGRAARRMPRECSPDNFQRTQNRVRTAPLWGLRLRTRLMHDGASLTLRDAILRHAGEATQ HHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHH SAHSFRSLPPRDQEALLQFLRSL HHHHHHCCCCCCHHHHHHHHHCC >Mature Secondary Structure PKTAVLSCLLLLSLAFAESQKRKSLPAAPPLPEAPAAFDNLSNGMVDDATHQADQLKFD CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHCCHH SIETVADGLGPLYNGQSCRECHQNPTSGGASQITVLRVGHLGPDHRFQNPNIPINRGTEI HHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEE ITGRTLVNDRAICPSAAFPATDIQERVPDSETVRTTRISLNLLGDGLIEAVADQTLIDLS EECCEEECCCCCCCCCCCCCCCHHHHCCCCHHEEEEEEEEEHHHHHHHHHHHHHHHHHHH RKQCQSTHGKVCGLVIYVPIVEATGQAAVGRFGWKNQHASLLSFSGDAYLNEMGITTQLF HHHHHHHCCCEEEEEEEEEEHHCCCCHHHHHCCCCCCCCHHEEECCCHHHHHCCCEEEEC PDEVTKLCNNAPEPNDTAGPDGLADMDRFARFVRASKAPPRDTALAATPAAQTGSALFDK HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHH AGCAVCHVATLATAPAGLKINGGAYTIPPALGGKTFHPFGDFLLHDVGTGDGIVIPTVEH CCHHHHHHHHHHCCCCCEEECCCCEECCCCCCCCCCCCHHHHHHHHCCCCCCEEECCHHH YGRAARRMPRECSPDNFQRTQNRVRTAPLWGLRLRTRLMHDGASLTLRDAILRHAGEATQ HHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHH SAHSFRSLPPRDQEALLQFLRSL HHHHHHCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA