| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621500
Identifier: 116621500
GI number: 116621500
Start: 3035124
End: 3036674
Strand: Reverse
Name: 116621500
Synonym: Acid_2382
Alternate gene names: NA
Gene position: 3036674-3035124 (Counterclockwise)
Preceding gene: 116621501
Following gene: 116621496
Centisome position: 30.47
GC content: 64.67
Gene sequence:
>1551_bases ATGAGTAAGTCATCTTTGCGCGTCTTAGCGATATTACTCTCCGTGGCTATCATCGGCGTGATCTTCGCCGGGCTCGACAA CCTGCCGCGCGACGTGCGCGCGCAGATCGCCGACGAGCGTTCGGCGTACACGGCGGCACAGGGTCAACTGAAGTCTGTCC AGCAGGAGATCGCACGCGACACGACGAGCGAGGCCGCACTGTTCGGAGCGCTGCCCTCGGCGCGTGAGTATCCGGACCGC CTGGCGCGGGCCAACGCGGCCCTCAGCGCCGCCGGCCGCGATGTCGAGGAACTGGCGCGGCTCGAGAAGGCGAATCGCCG GCAGGATCGCGACCGGGCAACCGCGCTCCTGGCGCAGGAGAAAAAGGTCCGCACGGCCGCCGTCGCCGATGCCGAGAGCG TTCGCAAGGACGCCGCGCATTGGATCGAGTTGAAGCAGCACCTGCCGCAGGAAGTGCAGGACATGGAGCGCGATTATCAG GCCATCCGCGCAGTGGACCTGACGGCTGCTGCGGCGGCGGTGCAGAAGGCGTCGGCCGATTGGCCGGAGAAGAAGAGCGA TCTGGACGCCCGCCTGGAGGCCGCGAAGCAAAGGATCGCGCACAGCGAGGAGTTGTGGCAATCGAGCGCGGATGCGCGCC GCGCGGCCGCGGCCAACGATGTGGCCAAGGTCGATTTCGCCCGCCTGTTTACGGCCGCCGACGGGCTCAAGACTAACGCC GTCGAAGTCCCCAAACAGAACGAGCAGATCAAGCAGTTGAGCGCGCAGTTGTATCAATCGTGGGACAAGATCCTGGCCGA CATGGAAGTGCGCGGCGTCGGTAACGCGCGTGAGTACGACCAGAAGATCCGCACCATCCGCACGCAGGTCGCGGACGCCA CGGGCAAGCCGGGAACCAGCACGAGCGACGAAAAGTGGGTCGATGTTTCGAAGGCGCAGTACGACGCCGGCGAGAAGAAT CTCGGCATGGCGATCGAGCACAAGCCGGCGGGTAAGTACGATACCGAGAGTGAGCGCGTCGTTCAGCCGGCCGGTTTCGC CTACATGGCGCCTCCCGGACAGAGTAATCAGTACGGCCACTGGGACCATCACGACGGCCGCGATTTCTGGGTCTTCTACG GTCAGTACGCGCTGATGCGCGACCTCCTGTTCAACCACAGTTACCGCCCGTTCGAACGCTACGAGTACGAGGATTACCGG AGTTACCGGCAGCGAAACCAGACTTACTACGGCCGCGATGAGACCACCCAGGCGCCCAAGTACGGAACCTCCGGCACCAC CACCCAGGAGCATTACTCGGGAAGCACCTTCGCGAAAAGCGGCGGGTTTAAGGATTCGAAGTACGCGTCGAAGGCTGGCG GATATCGCGATTCCCAGTACTCCACGCCGATGGCGAAGGATCCGAACGCAGACCACAGCCCGCGCAAATTCGGCACCGGT AGCAACGCGTCACCGGCGCCCTCGCGCTCCTACCGCCCTTCGCCGACCCCATACCGGCCATCCGCCCCAAGAAGTCCCGG ACGCAGCTTCGGCAGCCCGCGCCGAAGGTAG
Upstream 100 bases:
>100_bases TGCCGTGAATCCGGGCGATGTAACGGTTTATCGCAAGAACTAACAGTAAGTGGGGCGGCATGCGCCGCCCCCATTTCAAG ACAATCGAAGGCAATTCATC
Downstream 100 bases:
>100_bases GCCGCGACCGTCAGTGAGCGATCGTTGTGGGGCAGCCAATCCTGGCTGCAGCCGCCTTTCAGGCGGCTTCCCGCGCCTCC AAATTGAGCGCTTCTCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MSKSSLRVLAILLSVAIIGVIFAGLDNLPRDVRAQIADERSAYTAAQGQLKSVQQEIARDTTSEAALFGALPSAREYPDR LARANAALSAAGRDVEELARLEKANRRQDRDRATALLAQEKKVRTAAVADAESVRKDAAHWIELKQHLPQEVQDMERDYQ AIRAVDLTAAAAAVQKASADWPEKKSDLDARLEAAKQRIAHSEELWQSSADARRAAAANDVAKVDFARLFTAADGLKTNA VEVPKQNEQIKQLSAQLYQSWDKILADMEVRGVGNAREYDQKIRTIRTQVADATGKPGTSTSDEKWVDVSKAQYDAGEKN LGMAIEHKPAGKYDTESERVVQPAGFAYMAPPGQSNQYGHWDHHDGRDFWVFYGQYALMRDLLFNHSYRPFERYEYEDYR SYRQRNQTYYGRDETTQAPKYGTSGTTTQEHYSGSTFAKSGGFKDSKYASKAGGYRDSQYSTPMAKDPNADHSPRKFGTG SNASPAPSRSYRPSPTPYRPSAPRSPGRSFGSPRRR
Sequences:
>Translated_516_residues MSKSSLRVLAILLSVAIIGVIFAGLDNLPRDVRAQIADERSAYTAAQGQLKSVQQEIARDTTSEAALFGALPSAREYPDR LARANAALSAAGRDVEELARLEKANRRQDRDRATALLAQEKKVRTAAVADAESVRKDAAHWIELKQHLPQEVQDMERDYQ AIRAVDLTAAAAAVQKASADWPEKKSDLDARLEAAKQRIAHSEELWQSSADARRAAAANDVAKVDFARLFTAADGLKTNA VEVPKQNEQIKQLSAQLYQSWDKILADMEVRGVGNAREYDQKIRTIRTQVADATGKPGTSTSDEKWVDVSKAQYDAGEKN LGMAIEHKPAGKYDTESERVVQPAGFAYMAPPGQSNQYGHWDHHDGRDFWVFYGQYALMRDLLFNHSYRPFERYEYEDYR SYRQRNQTYYGRDETTQAPKYGTSGTTTQEHYSGSTFAKSGGFKDSKYASKAGGYRDSQYSTPMAKDPNADHSPRKFGTG SNASPAPSRSYRPSPTPYRPSAPRSPGRSFGSPRRR >Mature_515_residues SKSSLRVLAILLSVAIIGVIFAGLDNLPRDVRAQIADERSAYTAAQGQLKSVQQEIARDTTSEAALFGALPSAREYPDRL ARANAALSAAGRDVEELARLEKANRRQDRDRATALLAQEKKVRTAAVADAESVRKDAAHWIELKQHLPQEVQDMERDYQA IRAVDLTAAAAAVQKASADWPEKKSDLDARLEAAKQRIAHSEELWQSSADARRAAAANDVAKVDFARLFTAADGLKTNAV EVPKQNEQIKQLSAQLYQSWDKILADMEVRGVGNAREYDQKIRTIRTQVADATGKPGTSTSDEKWVDVSKAQYDAGEKNL GMAIEHKPAGKYDTESERVVQPAGFAYMAPPGQSNQYGHWDHHDGRDFWVFYGQYALMRDLLFNHSYRPFERYEYEDYRS YRQRNQTYYGRDETTQAPKYGTSGTTTQEHYSGSTFAKSGGFKDSKYASKAGGYRDSQYSTPMAKDPNADHSPRKFGTGS NASPAPSRSYRPSPTPYRPSAPRSPGRSFGSPRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57421; Mature: 57290
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSSLRVLAILLSVAIIGVIFAGLDNLPRDVRAQIADERSAYTAAQGQLKSVQQEIARD CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TTSEAALFGALPSAREYPDRLARANAALSAAGRDVEELARLEKANRRQDRDRATALLAQE CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KKVRTAAVADAESVRKDAAHWIELKQHLPQEVQDMERDYQAIRAVDLTAAAAAVQKASAD HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WPEKKSDLDARLEAAKQRIAHSEELWQSSADARRAAAANDVAKVDFARLFTAADGLKTNA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VEVPKQNEQIKQLSAQLYQSWDKILADMEVRGVGNAREYDQKIRTIRTQVADATGKPGTS EECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC TSDEKWVDVSKAQYDAGEKNLGMAIEHKPAGKYDTESERVVQPAGFAYMAPPGQSNQYGH CCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHEECCCCCEEECCCCCCCCCCC WDHHDGRDFWVFYGQYALMRDLLFNHSYRPFERYEYEDYRSYRQRNQTYYGRDETTQAPK CCCCCCCEEEEEHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCC YGTSGTTTQEHYSGSTFAKSGGFKDSKYASKAGGYRDSQYSTPMAKDPNADHSPRKFGTG CCCCCCCCHHHCCCCCHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SNASPAPSRSYRPSPTPYRPSAPRSPGRSFGSPRRR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKSSLRVLAILLSVAIIGVIFAGLDNLPRDVRAQIADERSAYTAAQGQLKSVQQEIARD CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TTSEAALFGALPSAREYPDRLARANAALSAAGRDVEELARLEKANRRQDRDRATALLAQE CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KKVRTAAVADAESVRKDAAHWIELKQHLPQEVQDMERDYQAIRAVDLTAAAAAVQKASAD HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WPEKKSDLDARLEAAKQRIAHSEELWQSSADARRAAAANDVAKVDFARLFTAADGLKTNA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VEVPKQNEQIKQLSAQLYQSWDKILADMEVRGVGNAREYDQKIRTIRTQVADATGKPGTS EECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC TSDEKWVDVSKAQYDAGEKNLGMAIEHKPAGKYDTESERVVQPAGFAYMAPPGQSNQYGH CCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHEECCCCCEEECCCCCCCCCCC WDHHDGRDFWVFYGQYALMRDLLFNHSYRPFERYEYEDYRSYRQRNQTYYGRDETTQAPK CCCCCCCEEEEEHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCC YGTSGTTTQEHYSGSTFAKSGGFKDSKYASKAGGYRDSQYSTPMAKDPNADHSPRKFGTG CCCCCCCCHHHCCCCCHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SNASPAPSRSYRPSPTPYRPSAPRSPGRSFGSPRRR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA