| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621496
Identifier: 116621496
GI number: 116621496
Start: 3028212
End: 3029294
Strand: Reverse
Name: 116621496
Synonym: Acid_2378
Alternate gene names: NA
Gene position: 3029294-3028212 (Counterclockwise)
Preceding gene: 116621500
Following gene: 116621494
Centisome position: 30.4
GC content: 59.1
Gene sequence:
>1083_bases ATGATGCGATTGGCAGTCTTGCTCCTGGCCCTCACCGCCTCCGCCCAGGACATGAAGCTCAAATTCCCGTCGAACGAGTG GGCGCGCATCAAGCCGGAGGACGCGGGCTATTCGAGCGAGAAGTTGGAAGTGGTGCGCGCCTGGCTCAAGACCCAGAAGA CCACCGCCATGCACGTCTCCATCGCCGGACAGGCGATCTTCGAGTACGGCGACGTGAAGCGCGTAAGCAAATTGGCATCC ATTCGCAAGAGCATTCTGGCCATGCTATACGGCAAGTACGTCGCCGAGGGCAAGATCGATTTAAGCAAGACCGTGGAGCA ATTGGGCCTGGCGGATGTCCAGCCATTCCTCCCGATCGAGAAGCAGGCGACGCTCTATAACCTGCTGACCGCGCGCTCCG GCATCTATCACCCGACGGCGAATATGGAATTGACCGACCTCTCTCCGCGCCGCGGCTCCCAGACTCCCGGCACTTATTTC CAATATCAGAATTGGGATTTCAATGCGGCCGGTACCGCGTTTGAAAAACTTACCGGAAAGGATATCTTCGCGGCGTTGGA AGAGGACTTGGCCAAGCCCGCGGGCATGGAGGATTTCGATCGCGCAAAACAGCGCAAGAACAACGAAATGCCCGTGACCA GACACCCGGAGTACGCCATGTATTTATCCGCTCGCGACATGGCGCGCGTGGGATTGCTGATGCTCTCCGATGGCCAGTGG AACGGCAAACGGTTGATGCCCAAAGGATGGAGCAGCCGCATCACAACCCTCGTGACGCCAGCATCGGAAATTCATCCGCT CCAACTCAGCATGCGAACCCGAGGCAGCCTGTGGGGCTATGGGATGTTGTGGTGGGTGTGGGACGCGCCCATCACACCGG GCTTGGTAACCGGACCCTATCAAGGCGCGTTCAGCGCGATGGGAGCCAACGGCCAGTACATCACGGTGCTGCCCGCGATG AACCTCGTGCTCGCGCACAAAGTCGATTTCGATGAAGATGGCTCCCGCGAGATTTCCCCGGGCCAGTTCCACGCCATCCT GCAAATGCTGATCGAGTCCGGCTGTTCCGGACCCTGCAAATAG
Upstream 100 bases:
>100_bases AACTAAACCGGTGATCCCAGCAACCAACAACAAACTCCGCATGTATCAAAGGCTACGGGGTCTCTACCCGCCTGTCAATC CGCCAGTGGTATTAGGAATA
Downstream 100 bases:
>100_bases CCCTAGCCGCAATCCCGGCAGCGCGCCGCCAATAGGCCCGTGGCCGCGCTGAGATCGATGTCCGCGACCAACAAGCCTTC TTTCCCGTATGGCTGGTAGC
Product: beta-lactamase
Products: NA
Alternate protein names: 6-Aminohexanoate-Dimer Hydrolase; Amide Hydrolase; Beta-Lactamase Family Protein; Membrane Or Secreted Beta-Lactamase Family Protein; Beta-Lactamase Class C Family Protein
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MMRLAVLLLALTASAQDMKLKFPSNEWARIKPEDAGYSSEKLEVVRAWLKTQKTTAMHVSIAGQAIFEYGDVKRVSKLAS IRKSILAMLYGKYVAEGKIDLSKTVEQLGLADVQPFLPIEKQATLYNLLTARSGIYHPTANMELTDLSPRRGSQTPGTYF QYQNWDFNAAGTAFEKLTGKDIFAALEEDLAKPAGMEDFDRAKQRKNNEMPVTRHPEYAMYLSARDMARVGLLMLSDGQW NGKRLMPKGWSSRITTLVTPASEIHPLQLSMRTRGSLWGYGMLWWVWDAPITPGLVTGPYQGAFSAMGANGQYITVLPAM NLVLAHKVDFDEDGSREISPGQFHAILQMLIESGCSGPCK
Sequences:
>Translated_360_residues MMRLAVLLLALTASAQDMKLKFPSNEWARIKPEDAGYSSEKLEVVRAWLKTQKTTAMHVSIAGQAIFEYGDVKRVSKLAS IRKSILAMLYGKYVAEGKIDLSKTVEQLGLADVQPFLPIEKQATLYNLLTARSGIYHPTANMELTDLSPRRGSQTPGTYF QYQNWDFNAAGTAFEKLTGKDIFAALEEDLAKPAGMEDFDRAKQRKNNEMPVTRHPEYAMYLSARDMARVGLLMLSDGQW NGKRLMPKGWSSRITTLVTPASEIHPLQLSMRTRGSLWGYGMLWWVWDAPITPGLVTGPYQGAFSAMGANGQYITVLPAM NLVLAHKVDFDEDGSREISPGQFHAILQMLIESGCSGPCK >Mature_360_residues MMRLAVLLLALTASAQDMKLKFPSNEWARIKPEDAGYSSEKLEVVRAWLKTQKTTAMHVSIAGQAIFEYGDVKRVSKLAS IRKSILAMLYGKYVAEGKIDLSKTVEQLGLADVQPFLPIEKQATLYNLLTARSGIYHPTANMELTDLSPRRGSQTPGTYF QYQNWDFNAAGTAFEKLTGKDIFAALEEDLAKPAGMEDFDRAKQRKNNEMPVTRHPEYAMYLSARDMARVGLLMLSDGQW NGKRLMPKGWSSRITTLVTPASEIHPLQLSMRTRGSLWGYGMLWWVWDAPITPGLVTGPYQGAFSAMGANGQYITVLPAM NLVLAHKVDFDEDGSREISPGQFHAILQMLIESGCSGPCK
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40050; Mature: 40050
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRLAVLLLALTASAQDMKLKFPSNEWARIKPEDAGYSSEKLEVVRAWLKTQKTTAMHVS CHHHHHHHHHHHCCCCCEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEE IAGQAIFEYGDVKRVSKLASIRKSILAMLYGKYVAEGKIDLSKTVEQLGLADVQPFLPIE ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCC KQATLYNLLTARSGIYHPTANMELTDLSPRRGSQTPGTYFQYQNWDFNAAGTAFEKLTGK HHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHCCH DIFAALEEDLAKPAGMEDFDRAKQRKNNEMPVTRHPEYAMYLSARDMARVGLLMLSDGQW HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHEEEEEEECCCC NGKRLMPKGWSSRITTLVTPASEIHPLQLSMRTRGSLWGYGMLWWVWDAPITPGLVTGPY CCCCCCCCCCCCCCEEEECCHHHCCEEEEEECCCCCCCCCEEEEEEECCCCCCCEEECCC QGAFSAMGANGQYITVLPAMNLVLAHKVDFDEDGSREISPGQFHAILQMLIESGCSGPCK CCHHHHCCCCCCEEEEECHHCCHHHEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MMRLAVLLLALTASAQDMKLKFPSNEWARIKPEDAGYSSEKLEVVRAWLKTQKTTAMHVS CHHHHHHHHHHHCCCCCEEEECCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEE IAGQAIFEYGDVKRVSKLASIRKSILAMLYGKYVAEGKIDLSKTVEQLGLADVQPFLPIE ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCC KQATLYNLLTARSGIYHPTANMELTDLSPRRGSQTPGTYFQYQNWDFNAAGTAFEKLTGK HHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHCCH DIFAALEEDLAKPAGMEDFDRAKQRKNNEMPVTRHPEYAMYLSARDMARVGLLMLSDGQW HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECHHHHHHEEEEEEECCCC NGKRLMPKGWSSRITTLVTPASEIHPLQLSMRTRGSLWGYGMLWWVWDAPITPGLVTGPY CCCCCCCCCCCCCCEEEECCHHHCCEEEEEECCCCCCCCCEEEEEEECCCCCCCEEECCC QGAFSAMGANGQYITVLPAMNLVLAHKVDFDEDGSREISPGQFHAILQMLIESGCSGPCK CCHHHHCCCCCCEEEEECHHCCHHHEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA