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The map label for this gene is 116621476

Identifier: 116621476

GI number: 116621476

Start: 3003972

End: 3005489

Strand: Reverse

Name: 116621476

Synonym: Acid_2358

Alternate gene names: NA

Gene position: 3005489-3003972 (Counterclockwise)

Preceding gene: 116621479

Following gene: 116621475

Centisome position: 30.16

GC content: 61.92

Gene sequence:

>1518_bases
ATGAAACGACTGTTCAGCAGAATCCTGATTGTCTGCCCCCTAACATGCGGATGTTTGGCGGCCCAAATTCAACTGGCGCT
AAATCCATCGCCATCGTCGCTCCAGATCAATCAGAGCAGCGGCCTGCTGATTTCACTCACAAATACGAATGCCGAATCGA
ACGCCCTGGTTCAACATGGGGACGTGCTGCGGTTCTACCTGGCTTTGGGAGACGGAGGGGTTCTGTCTGTAGGCGGAAAC
CCGATTGTCGGTGGTCGAGCTTTTCACGATGGTGACTGGACGGTGGATACATCGGCGGGCCTCAATCCCGTCGCGCTGGT
CTACCAAGGCCCAAATCGAGTCTGGACCGCTCTGGAGAGCGTTGCGGTTCCACTAAATATCCGTCCTCCAACCTCCACCA
CAGTTGGTGTGATCGTGTTGCGCATCCCAATGGATGGACGCTATGCCGGTCAGGAATGGCAGACGAACCCGATCAACATT
GTGGGCGCCGGGCTATTGCCTCGGGGCGATACCGGACCGGCCGGAGCAACTGGCGCCGCTGGCCCGACCGGGCCCCAAGG
ACCGATCGGCCCCTACGGAGCGATGGGCATCCAAGGGCCTATGGGCTCGCCGGGGGGAACGGGACCGGTGGGGGCCAATG
GGGCGACAGGGCCAATGGGGCCGATGGGTCCCGCGGGCCCCCAGGGATTATCCGGCGCGATGGTATTTTACGGCGATGGC
TCCGAGGGCGCGCTGAGCATCTCCACCGCTGTTGACTGGAACGTAACCCCACCCGCCGGCATGCTGCAATTCTCCAGCTT
CACGATTACCCCCACCGGCTCGCTGACTATTCCAAGCGGCCTGGTGATTCGGGTCACTGGAAGTGTGAATATCATGGGGC
CGATTACGGTCGGCCCTGGATCATGGAACTACGGCAGCAATTGTTATTCGGCGCCGCAGAGTACGGCTGGCACACCTGCC
CTCGCCCCGCTCCAAGCGCGATTCATGCTGAGGCCGCCCCCCGTGGGAATTCCCCCTTTGGGATACGATTACGGCGGCGC
CACCGGCGGCGGTGTTGCAATTCTTTCCGCCGGGCCCATGACGATCACCGGGAATGGCTCGATCAGAGCCTCTGGTTTAG
ATGGAAGCCTTTATAGCGGCAATTCCGGCAGTGTCCTCTGGGCGGCAAGCCCCGGTGGACTCGTGGTCTTGGGATCCCGA
GCCTCGATCAGCAACGCGGGAAGCATTGTCGCAAACGGAGGAAAGGGCGCTGACGGTGACTGGTACCACGGCTCGGGTGG
CGGTGGAGGAGGCGGCATCGTCCACTTCTTCGCGCCCTTTATAAGCTCCGGGAGCGTGGATGTATCTGGCGGAATTGGCG
CCGCCGGCCATGGCGGCACTTACACTTTCGTTGTCGGGGGAGCATGCGGCGGAAGTGGCGGATCTTCTAACATAGCGGGT
CAGCCGGGCGGCGCCGGCGGAAGCGGGCAGGTGTTCAGAACCATTACCGCGGAGCCAGCCGCCTTGTTCGTACCGTGA

Upstream 100 bases:

>100_bases
TGGTCTACAAGTCAGAAAATAGGGACATAGTACGACAGGTAAATTGTGGTAGCTTTTTGTATTATCTATTTCAGACTATA
GAGTGTAAATATCTTTTATT

Downstream 100 bases:

>100_bases
CTCAATACGCCAGGTAATCGCAGGCTCCCGTCACGGTTCGCTTAGAAAAGGCGCTCGCGTCCACTTCTCAGGCCTCGACG
GTCCCTCCATCATCCGCACC

Product: triple helix repeat-containing collagen

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MKRLFSRILIVCPLTCGCLAAQIQLALNPSPSSLQINQSSGLLISLTNTNAESNALVQHGDVLRFYLALGDGGVLSVGGN
PIVGGRAFHDGDWTVDTSAGLNPVALVYQGPNRVWTALESVAVPLNIRPPTSTTVGVIVLRIPMDGRYAGQEWQTNPINI
VGAGLLPRGDTGPAGATGAAGPTGPQGPIGPYGAMGIQGPMGSPGGTGPVGANGATGPMGPMGPAGPQGLSGAMVFYGDG
SEGALSISTAVDWNVTPPAGMLQFSSFTITPTGSLTIPSGLVIRVTGSVNIMGPITVGPGSWNYGSNCYSAPQSTAGTPA
LAPLQARFMLRPPPVGIPPLGYDYGGATGGGVAILSAGPMTITGNGSIRASGLDGSLYSGNSGSVLWAASPGGLVVLGSR
ASISNAGSIVANGGKGADGDWYHGSGGGGGGGIVHFFAPFISSGSVDVSGGIGAAGHGGTYTFVVGGACGGSGGSSNIAG
QPGGAGGSGQVFRTITAEPAALFVP

Sequences:

>Translated_505_residues
MKRLFSRILIVCPLTCGCLAAQIQLALNPSPSSLQINQSSGLLISLTNTNAESNALVQHGDVLRFYLALGDGGVLSVGGN
PIVGGRAFHDGDWTVDTSAGLNPVALVYQGPNRVWTALESVAVPLNIRPPTSTTVGVIVLRIPMDGRYAGQEWQTNPINI
VGAGLLPRGDTGPAGATGAAGPTGPQGPIGPYGAMGIQGPMGSPGGTGPVGANGATGPMGPMGPAGPQGLSGAMVFYGDG
SEGALSISTAVDWNVTPPAGMLQFSSFTITPTGSLTIPSGLVIRVTGSVNIMGPITVGPGSWNYGSNCYSAPQSTAGTPA
LAPLQARFMLRPPPVGIPPLGYDYGGATGGGVAILSAGPMTITGNGSIRASGLDGSLYSGNSGSVLWAASPGGLVVLGSR
ASISNAGSIVANGGKGADGDWYHGSGGGGGGGIVHFFAPFISSGSVDVSGGIGAAGHGGTYTFVVGGACGGSGGSSNIAG
QPGGAGGSGQVFRTITAEPAALFVP
>Mature_505_residues
MKRLFSRILIVCPLTCGCLAAQIQLALNPSPSSLQINQSSGLLISLTNTNAESNALVQHGDVLRFYLALGDGGVLSVGGN
PIVGGRAFHDGDWTVDTSAGLNPVALVYQGPNRVWTALESVAVPLNIRPPTSTTVGVIVLRIPMDGRYAGQEWQTNPINI
VGAGLLPRGDTGPAGATGAAGPTGPQGPIGPYGAMGIQGPMGSPGGTGPVGANGATGPMGPMGPAGPQGLSGAMVFYGDG
SEGALSISTAVDWNVTPPAGMLQFSSFTITPTGSLTIPSGLVIRVTGSVNIMGPITVGPGSWNYGSNCYSAPQSTAGTPA
LAPLQARFMLRPPPVGIPPLGYDYGGATGGGVAILSAGPMTITGNGSIRASGLDGSLYSGNSGSVLWAASPGGLVVLGSR
ASISNAGSIVANGGKGADGDWYHGSGGGGGGGIVHFFAPFISSGSVDVSGGIGAAGHGGTYTFVVGGACGGSGGSSNIAG
QPGGAGGSGQVFRTITAEPAALFVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49406; Mature: 49406

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLFSRILIVCPLTCGCLAAQIQLALNPSPSSLQINQSSGLLISLTNTNAESNALVQHG
CHHHHHHHHHCCCCCHHCEEEEEEEEECCCCCEEEEECCCCEEEEEECCCCCCCEEEECC
DVLRFYLALGDGGVLSVGGNPIVGGRAFHDGDWTVDTSAGLNPVALVYQGPNRVWTALES
CEEEEEEEECCCCEEEECCCEEECCEEEECCCEEEECCCCCCEEEEEEECCCHHHHHHHH
VAVPLNIRPPTSTTVGVIVLRIPMDGRYAGQEWQTNPINIVGAGLLPRGDTGPAGATGAA
EEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
GPTGPQGPIGPYGAMGIQGPMGSPGGTGPVGANGATGPMGPMGPAGPQGLSGAMVFYGDG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
SEGALSISTAVDWNVTPPAGMLQFSSFTITPTGSLTIPSGLVIRVTGSVNIMGPITVGPG
CCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCEECCCCEEEEEECCEEEEEEEEECCC
SWNYGSNCYSAPQSTAGTPALAPLQARFMLRPPPVGIPPLGYDYGGATGGGVAILSAGPM
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCE
TITGNGSIRASGLDGSLYSGNSGSVLWAASPGGLVVLGSRASISNAGSIVANGGKGADGD
EEECCCCEEEECCCCCEEECCCCCEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCC
WYHGSGGGGGGGIVHFFAPFISSGSVDVSGGIGAAGHGGTYTFVVGGACGGSGGSSNIAG
CEECCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
QPGGAGGSGQVFRTITAEPAALFVP
CCCCCCCCCCEEEEEECCCEEEECC
>Mature Secondary Structure
MKRLFSRILIVCPLTCGCLAAQIQLALNPSPSSLQINQSSGLLISLTNTNAESNALVQHG
CHHHHHHHHHCCCCCHHCEEEEEEEEECCCCCEEEEECCCCEEEEEECCCCCCCEEEECC
DVLRFYLALGDGGVLSVGGNPIVGGRAFHDGDWTVDTSAGLNPVALVYQGPNRVWTALES
CEEEEEEEECCCCEEEECCCEEECCEEEECCCEEEECCCCCCEEEEEEECCCHHHHHHHH
VAVPLNIRPPTSTTVGVIVLRIPMDGRYAGQEWQTNPINIVGAGLLPRGDTGPAGATGAA
EEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
GPTGPQGPIGPYGAMGIQGPMGSPGGTGPVGANGATGPMGPMGPAGPQGLSGAMVFYGDG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
SEGALSISTAVDWNVTPPAGMLQFSSFTITPTGSLTIPSGLVIRVTGSVNIMGPITVGPG
CCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCEECCCCEEEEEECCEEEEEEEEECCC
SWNYGSNCYSAPQSTAGTPALAPLQARFMLRPPPVGIPPLGYDYGGATGGGVAILSAGPM
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCE
TITGNGSIRASGLDGSLYSGNSGSVLWAASPGGLVVLGSRASISNAGSIVANGGKGADGD
EEECCCCEEEECCCCCEEECCCCCEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCC
WYHGSGGGGGGGIVHFFAPFISSGSVDVSGGIGAAGHGGTYTFVVGGACGGSGGSSNIAG
CEECCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
QPGGAGGSGQVFRTITAEPAALFVP
CCCCCCCCCCEEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA