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The map label for this gene is ykcC [H]

Identifier: 116621458

GI number: 116621458

Start: 2984029

End: 2984961

Strand: Direct

Name: ykcC [H]

Synonym: Acid_2340

Alternate gene names: 116621458

Gene position: 2984029-2984961 (Clockwise)

Preceding gene: 116621457

Following gene: 116621460

Centisome position: 29.94

GC content: 62.27

Gene sequence:

>933_bases
GTGAAGTATTCACTGATCATCCCGGTTTACAAGAACGAGGCGAACCTGGATCGATTGCTCCCCGAAGTGGTGAAGCTGGG
CGCGCGCGCGCCCGGGGAATTCGAAGTGGTTTTCGTGGTGGACGGCAGTCCGGACCGGTGCCTGGAGATTCTGCGCGCGC
GGCTTCCGTTGCTGCCGTTGCGGAGCAAGCTGCTCTCGCTGAGCCGCAATTTCGGCTCTTTCGCAGCCGTGGCGGCCGGG
ATGGAAAAGGCGTGGGGCGATTGCATCGCGGTGATGGCGGCGGACCTTCAGGAGCCGCCCGAACTGGTGCTGCAATTCTT
CGAAGCACTCGGCAGCGGACGTACGGACATTGTTTTCGGAGTGCGCGGCGGGCGCTCCGACCCCTGGCCCTCGGAGATGG
CGTCCACTCTGTTCTGGTATTTCTATCGCAAGTTCGTCATTAAAGACATGCCGGCCGGCGGAGTGGATGTTTTCGGATGC
ACGCGCCAGGTGCGCGATCAGCTGCTGCCGCTGCAGGGCGTCAATACCAACATCATCGCGCTGCTTTTCTGGCTGGGCTT
CCGGCGCGAGTACATCGTGTACCAGCGGCAGGAGCGGCTGGAGGGGAAGAGCGCCTGGACCTTCGGCAGGAAACTGCGGT
ACGCGCTGGACAGCATTTTCAATTTCACCGACCTGCCGATCCGGCTGCTGTTGTACGCCGGTTCGATCGCGATGGTGCTG
GCCGTGGTTTTCGCGGGGTTGGTGTTGACGGCGAAATTGCGCGGCGATATCCCGGTGCCCGGCTATGCGCCCATCGTGCT
GGCGATCATGTTTTTCGGCGCGTTGACCAGCCTCGGGTTCGGGATCGTGGGGCAATACCTGTGGCTGGGATTGCAGGTGA
GCCGCCGCCGTCCGAACTACGTGGTCCATTCGGTGGAAGAGCATCAGGTGTAG

Upstream 100 bases:

>100_bases
GGTACTCGGCGGACGCGGTGCTGCTGGTGCTGGCCTCGGACCGCTACAACCCGGACAGCTACATCCGGGAGTACTCCGAG
TTTCTGCGACTGGTGAAGGC

Downstream 100 bases:

>100_bases
CGGGCCGGGAGGCGGGAGAGTGGAACCCGCCCGCCTCCGGCGCCTTTTCCCTACTGGTCGGTCTTGACGGAATGCCGGAT
GCGGACCGTGCCTACGGAGA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MKYSLIIPVYKNEANLDRLLPEVVKLGARAPGEFEVVFVVDGSPDRCLEILRARLPLLPLRSKLLSLSRNFGSFAAVAAG
MEKAWGDCIAVMAADLQEPPELVLQFFEALGSGRTDIVFGVRGGRSDPWPSEMASTLFWYFYRKFVIKDMPAGGVDVFGC
TRQVRDQLLPLQGVNTNIIALLFWLGFRREYIVYQRQERLEGKSAWTFGRKLRYALDSIFNFTDLPIRLLLYAGSIAMVL
AVVFAGLVLTAKLRGDIPVPGYAPIVLAIMFFGALTSLGFGIVGQYLWLGLQVSRRRPNYVVHSVEEHQV

Sequences:

>Translated_310_residues
MKYSLIIPVYKNEANLDRLLPEVVKLGARAPGEFEVVFVVDGSPDRCLEILRARLPLLPLRSKLLSLSRNFGSFAAVAAG
MEKAWGDCIAVMAADLQEPPELVLQFFEALGSGRTDIVFGVRGGRSDPWPSEMASTLFWYFYRKFVIKDMPAGGVDVFGC
TRQVRDQLLPLQGVNTNIIALLFWLGFRREYIVYQRQERLEGKSAWTFGRKLRYALDSIFNFTDLPIRLLLYAGSIAMVL
AVVFAGLVLTAKLRGDIPVPGYAPIVLAIMFFGALTSLGFGIVGQYLWLGLQVSRRRPNYVVHSVEEHQV
>Mature_310_residues
MKYSLIIPVYKNEANLDRLLPEVVKLGARAPGEFEVVFVVDGSPDRCLEILRARLPLLPLRSKLLSLSRNFGSFAAVAAG
MEKAWGDCIAVMAADLQEPPELVLQFFEALGSGRTDIVFGVRGGRSDPWPSEMASTLFWYFYRKFVIKDMPAGGVDVFGC
TRQVRDQLLPLQGVNTNIIALLFWLGFRREYIVYQRQERLEGKSAWTFGRKLRYALDSIFNFTDLPIRLLLYAGSIAMVL
AVVFAGLVLTAKLRGDIPVPGYAPIVLAIMFFGALTSLGFGIVGQYLWLGLQVSRRRPNYVVHSVEEHQV

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=309, Percent_Identity=27.831715210356, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1788588, Length=309, Percent_Identity=27.5080906148867, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 34698; Mature: 34698

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYSLIIPVYKNEANLDRLLPEVVKLGARAPGEFEVVFVVDGSPDRCLEILRARLPLLPL
CCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCHHH
RSKLLSLSRNFGSFAAVAAGMEKAWGDCIAVMAADLQEPPELVLQFFEALGSGRTDIVFG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEE
VRGGRSDPWPSEMASTLFWYFYRKFVIKDMPAGGVDVFGCTRQVRDQLLPLQGVNTNIIA
ECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH
LLFWLGFRREYIVYQRQERLEGKSAWTFGRKLRYALDSIFNFTDLPIRLLLYAGSIAMVL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHH
AVVFAGLVLTAKLRGDIPVPGYAPIVLAIMFFGALTSLGFGIVGQYLWLGLQVSRRRPNY
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VVHSVEEHQV
EEECCHHCCC
>Mature Secondary Structure
MKYSLIIPVYKNEANLDRLLPEVVKLGARAPGEFEVVFVVDGSPDRCLEILRARLPLLPL
CCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCHHH
RSKLLSLSRNFGSFAAVAAGMEKAWGDCIAVMAADLQEPPELVLQFFEALGSGRTDIVFG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEE
VRGGRSDPWPSEMASTLFWYFYRKFVIKDMPAGGVDVFGCTRQVRDQLLPLQGVNTNIIA
ECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH
LLFWLGFRREYIVYQRQERLEGKSAWTFGRKLRYALDSIFNFTDLPIRLLLYAGSIAMVL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHH
AVVFAGLVLTAKLRGDIPVPGYAPIVLAIMFFGALTSLGFGIVGQYLWLGLQVSRRRPNY
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VVHSVEEHQV
EEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]