| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is resA [H]
Identifier: 116621401
GI number: 116621401
Start: 2916573
End: 2918078
Strand: Reverse
Name: resA [H]
Synonym: Acid_2283
Alternate gene names: 116621401
Gene position: 2918078-2916573 (Counterclockwise)
Preceding gene: 116621402
Following gene: 116621400
Centisome position: 29.28
GC content: 65.14
Gene sequence:
>1506_bases ATGAAGTCCCGACTGGTTCTCACCACACTTGCATTCGCGGGCGCTATCTGCGCGGCCGATACGACGGTAGCGCAGACCGC CGCGAAGCTGGAAGAGCAACTTACCACGGCGCCCGGGTCGATCGGGGCGGAATACCGGCTGGGCGCGGCTCAGGCATTGC AGGCGGGCTACCCGGAGCTCTCGCGCAGGTTTCTGGAGACTGCGCTGAAGTCGCTTCGCGGCAGCAAGGATGTTCCGGAG CCGGCGGTGTGGCAGGCGCTGGCGGAAATGGCGCCCGCGGAGGCGGCCGCGCTCGCACCGCAGTTTGGGTCCGGCGGCAC GCTGCTGGCGATCACGACCCTGGTGCGCGAGGGACATGCGGACGAGGCGGCGGCGCTGTACAGGAAGACCGCTGCCTCCT TCGCCGAGCCGTTGAGCTTCGCGGATGCGAACTGGCTGGTCAACGCGTCGGGTCCGCTGGCGAAGACCTTGCCGGATGCG GTTGCGGATAATTACGAGCGCGCGATTCGCGCCGCGTCGGCGTCGCCGGATTTCGGAGGCGACGTGAAGATGACGCGCAC GATCCAGGTTGGGACAACATCGATCACGACCGATAATGCGCGCGACACGCTGCTGATTCTGGCGGGCGCGCGGCTGCGGC TGCTCTCGCCGGAGCGCTTCGCGAAATACCGGGAGACCTTTTCGAAGTGGAATCTCACCGGCCCCGCGACGGTGCGGAGC GCAGGGGCGCCCGCGTCGCCTGAAGTGGCGTCGATCTCTAACCGCATGGGTACGATGCGGAAGCTGCCGAGCGACCGGGA TCGGACGCAGCTGGTGAAAGAGCTGGTTCCCGAGATTCGCAAGCTGCCACTGCAATGGCGGCTGGGTTTGATTCGCGGGC TGGCGGGCGTGGCGACGGAGGGCGACCTCGGGAAGGAGGCGCTGGGAATGGTCGCGGTTACGCTGGCGGACACGCTGAGG GAAGCGTCGCAGGGGCCGGGCTCGTACGGCGACAGCTATCTCGGACTTGCGAAAATGGTGCGCTACGAACATCTCACGGT GCCCACCGACCCTACGCTTGCAGCGGCGCAGGCGTTGCTGGCATTGCGCGAGCAGGTACAGCAGGAGAACGGCTTCAGCC TGACGAGCCTGGACGGCAAGACGTATACGCTGGCGGGATTGAAGGGCAAGATCGTGCTGTTGAACTTCTGGGCGACGTGG TGCCCGCCGTGCCGGAAGGAAATGCCCGACATGGAGAAGCTGTACCGGACATATGAGAAGCAGGGGTTGACGGTGATTGC GGTGTCGGACGAAGACCGCGAGACGGTGGCGAATTTCCTGGCGAAGAATAACTATAGTTTTCCGATTGCGCTGGATGCGG GGCGGAAGGTAAATAGCGCGTTCCTGGTGGAAGGGATCCCGCAGAGCTTCATTTTCGATCGCGAAGGGCGGCTCGCGGCG CAGGCGATCGATATGCGGACCGAGGGACAGTTTATGGAACTGCTGCGGCGGGCCGGGCTGGAGTAG
Upstream 100 bases:
>100_bases GGCGGGCCGCAGGGGAAGTCGCAGGCGCCGGCGCCGAAGAAGTCCGCGCCGGCGAAAAAGGCCGGAAAGCTCTGATATAC TCCGCCACAGGAGAGTCCGC
Downstream 100 bases:
>100_bases GGAGGCCTGTCCCAGTCTCGGGAGCTTTGATAGACTAAGCGGGTCGTGAGCTCGTCCCCGGTATTTCGATGTCCTACCTG CGGCAGTCTCGACTGTCGGC
Product: redoxin domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 501; Mature: 501
Protein sequence:
>501_residues MKSRLVLTTLAFAGAICAADTTVAQTAAKLEEQLTTAPGSIGAEYRLGAAQALQAGYPELSRRFLETALKSLRGSKDVPE PAVWQALAEMAPAEAAALAPQFGSGGTLLAITTLVREGHADEAAALYRKTAASFAEPLSFADANWLVNASGPLAKTLPDA VADNYERAIRAASASPDFGGDVKMTRTIQVGTTSITTDNARDTLLILAGARLRLLSPERFAKYRETFSKWNLTGPATVRS AGAPASPEVASISNRMGTMRKLPSDRDRTQLVKELVPEIRKLPLQWRLGLIRGLAGVATEGDLGKEALGMVAVTLADTLR EASQGPGSYGDSYLGLAKMVRYEHLTVPTDPTLAAAQALLALREQVQQENGFSLTSLDGKTYTLAGLKGKIVLLNFWATW CPPCRKEMPDMEKLYRTYEKQGLTVIAVSDEDRETVANFLAKNNYSFPIALDAGRKVNSAFLVEGIPQSFIFDREGRLAA QAIDMRTEGQFMELLRRAGLE
Sequences:
>Translated_501_residues MKSRLVLTTLAFAGAICAADTTVAQTAAKLEEQLTTAPGSIGAEYRLGAAQALQAGYPELSRRFLETALKSLRGSKDVPE PAVWQALAEMAPAEAAALAPQFGSGGTLLAITTLVREGHADEAAALYRKTAASFAEPLSFADANWLVNASGPLAKTLPDA VADNYERAIRAASASPDFGGDVKMTRTIQVGTTSITTDNARDTLLILAGARLRLLSPERFAKYRETFSKWNLTGPATVRS AGAPASPEVASISNRMGTMRKLPSDRDRTQLVKELVPEIRKLPLQWRLGLIRGLAGVATEGDLGKEALGMVAVTLADTLR EASQGPGSYGDSYLGLAKMVRYEHLTVPTDPTLAAAQALLALREQVQQENGFSLTSLDGKTYTLAGLKGKIVLLNFWATW CPPCRKEMPDMEKLYRTYEKQGLTVIAVSDEDRETVANFLAKNNYSFPIALDAGRKVNSAFLVEGIPQSFIFDREGRLAA QAIDMRTEGQFMELLRRAGLE >Mature_501_residues MKSRLVLTTLAFAGAICAADTTVAQTAAKLEEQLTTAPGSIGAEYRLGAAQALQAGYPELSRRFLETALKSLRGSKDVPE PAVWQALAEMAPAEAAALAPQFGSGGTLLAITTLVREGHADEAAALYRKTAASFAEPLSFADANWLVNASGPLAKTLPDA VADNYERAIRAASASPDFGGDVKMTRTIQVGTTSITTDNARDTLLILAGARLRLLSPERFAKYRETFSKWNLTGPATVRS AGAPASPEVASISNRMGTMRKLPSDRDRTQLVKELVPEIRKLPLQWRLGLIRGLAGVATEGDLGKEALGMVAVTLADTLR EASQGPGSYGDSYLGLAKMVRYEHLTVPTDPTLAAAQALLALREQVQQENGFSLTSLDGKTYTLAGLKGKIVLLNFWATW CPPCRKEMPDMEKLYRTYEKQGLTVIAVSDEDRETVANFLAKNNYSFPIALDAGRKVNSAFLVEGIPQSFIFDREGRLAA QAIDMRTEGQFMELLRRAGLE
Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 53958; Mature: 53958
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSRLVLTTLAFAGAICAADTTVAQTAAKLEEQLTTAPGSIGAEYRLGAAQALQAGYPEL CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHCCCHHH SRRFLETALKSLRGSKDVPEPAVWQALAEMAPAEAAALAPQFGSGGTLLAITTLVREGHA HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHCCCC DEAAALYRKTAASFAEPLSFADANWLVNASGPLAKTLPDAVADNYERAIRAASASPDFGG HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC DVKMTRTIQVGTTSITTDNARDTLLILAGARLRLLSPERFAKYRETFSKWNLTGPATVRS CEEEEEEEEECCEEEECCCCCCEEEEEECCCEEECCHHHHHHHHHHHHHCCCCCCHHHHC AGAPASPEVASISNRMGTMRKLPSDRDRTQLVKELVPEIRKLPLQWRLGLIRGLAGVATE CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC GDLGKEALGMVAVTLADTLREASQGPGSYGDSYLGLAKMVRYEHLTVPTDPTLAAAQALL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ALREQVQQENGFSLTSLDGKTYTLAGLKGKIVLLNFWATWCPPCRKEMPDMEKLYRTYEK HHHHHHHHCCCCEEEECCCCEEEEECCCCCEEEEECCHHHCCHHHHCCCCHHHHHHHHHH QGLTVIAVSDEDRETVANFLAKNNYSFPIALDAGRKVNSAFLVEGIPQSFIFDREGRLAA CCCEEEEECCCHHHHHHHHHHCCCCCCEEEECCCCCCCCHHEECCCCHHHEECCCCCHHH QAIDMRTEGQFMELLRRAGLE HHHCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MKSRLVLTTLAFAGAICAADTTVAQTAAKLEEQLTTAPGSIGAEYRLGAAQALQAGYPEL CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHCCCHHH SRRFLETALKSLRGSKDVPEPAVWQALAEMAPAEAAALAPQFGSGGTLLAITTLVREGHA HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHCCCC DEAAALYRKTAASFAEPLSFADANWLVNASGPLAKTLPDAVADNYERAIRAASASPDFGG HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC DVKMTRTIQVGTTSITTDNARDTLLILAGARLRLLSPERFAKYRETFSKWNLTGPATVRS CEEEEEEEEECCEEEECCCCCCEEEEEECCCEEECCHHHHHHHHHHHHHCCCCCCHHHHC AGAPASPEVASISNRMGTMRKLPSDRDRTQLVKELVPEIRKLPLQWRLGLIRGLAGVATE CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC GDLGKEALGMVAVTLADTLREASQGPGSYGDSYLGLAKMVRYEHLTVPTDPTLAAAQALL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ALREQVQQENGFSLTSLDGKTYTLAGLKGKIVLLNFWATWCPPCRKEMPDMEKLYRTYEK HHHHHHHHCCCCEEEECCCCEEEEECCCCCEEEEECCHHHCCHHHHCCCCHHHHHHHHHH QGLTVIAVSDEDRETVANFLAKNNYSFPIALDAGRKVNSAFLVEGIPQSFIFDREGRLAA CCCEEEEECCCHHHHHHHHHHCCCCCCEEEECCCCCCCCHHEECCCCHHHEECCCCCHHH QAIDMRTEGQFMELLRRAGLE HHHCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA