| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is yuaR [C]
Identifier: 116621387
GI number: 116621387
Start: 2897009
End: 2898220
Strand: Direct
Name: yuaR [C]
Synonym: Acid_2268
Alternate gene names: 116621387
Gene position: 2897009-2898220 (Clockwise)
Preceding gene: 116621385
Following gene: 116621389
Centisome position: 29.07
GC content: 68.65
Gene sequence:
>1212_bases ATGGGACACCGCTTCGCCGTTCTTGTGCTTGCCGCCTGCATTGGCTGCACCCGCGGCCCTACCGCCGGGGGCGCCGAAGT CAAGCTCCACGCCTGTTCCCTCGATGGAATTCCCGGGGAGGTTCTCTGTGCCAGGTATCCGGTCTGGGAAGACCGTGACC GGCAGGCGGGGCGCCGCATCACGCTTAACATCGTCGTTCTCCCCGCGCTCTCCGCCCCGGCCGAGCCCGACCCCGACCCC CTGGTTGTCCTCGCGGGCGGTCCCGGTCAGGCTGCGACCGATCTGATCCAGGCCTTCTTCCGGAATCGCGAGCTGCGCGC GCGCCGCCAGGTGGTTTTCATCGATCAGCGAGGCTCCGGCGGCTCCAACCCGTTGAACTGCGATCTCTACGGTTCGCCCC CCGATCCCAGGAGGATTTTGGCCGGCCCCTTCCCGGTCGATGCGGTCCGCGCCTGCCGCCTGCGCCTCCAGGCCGTCGCC GACCTCGGTCAGTACACCACCGCCGCCTCCATGGACGATGTCGATGACGTGCGCCGCTGGCTCGGTTTCGAAAAGGTCAA TCTCTGGGGCGGCTCCTACGGCACGCGCGCCGCACAGGTCTATCTCCGCCGCCACGGAGCCCACGTGCGCGCCGTCGTGC TCGAGGGCGTGCTGCCGGTGGACGAACTGGTCCCGCTGCATCAGCCCGCCACTGCGCAGCGCGCCATCGACCTGTTCCTG GCCCGAAACCGCGCCGCGTTCCCAGACCTGGAGGGCAGATTTCGCTCTCTCTTTGAGCCGCCGAGGCATCCTTCCATCGG CCTCCTCGAAGGCGTGCGCCACGCCTTGTACGGCGGCGACCCGCGCGCGTTTCCCGATCTCATCCGCCGCGCCGCGGCCG GCGACCTCGCGCCGCTTCAACAACTCGCCATCGACGCCGAAATCGCCCTTTCCCGTCTCTCCATCGGGCTCAATCTTTCC GTCACCTGCGCCGAAGATATTCCTTTTCTCGACGACGCCGCGATCGCTCGCGAAACCGCCGGCACTTTCCTCGGCGACGG CCGCATTCAGCGTCAGCGGTCCGCCTGTCGCGAAATGGGTGGCAGGCCCGGTGCCGGCCGATCTGCACGAACCCGTGCGC TCGGACGTTCCGGTCCTGCTCTTCTCCGGCGGCCGCGATCCCGTGACTCCCCCGGCATTTGGCGAGCACGTCGCGGCCAC GCTCCCCAATAG
Upstream 100 bases:
>100_bases TTCCTGATGCGGTGAAAGCGCGCTTTGTCTCCGTTGATTGCTGACATTTGACCCAAGGTTAGCAGGTATCGAGGCCGATA TATACTCAGGCAGGGATCGA
Downstream 100 bases:
>100_bases CCGCCACATCATCTTCCCCGACGCGGCGCACGGCAACTTCAGCCCTTGCGCCCGCCGATTGCTGTCCGATTTTTTCGCCG CCGCTTCAACCCACACGCTC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MGHRFAVLVLAACIGCTRGPTAGGAEVKLHACSLDGIPGEVLCARYPVWEDRDRQAGRRITLNIVVLPALSAPAEPDPDP LVVLAGGPGQAATDLIQAFFRNRELRARRQVVFIDQRGSGGSNPLNCDLYGSPPDPRRILAGPFPVDAVRACRLRLQAVA DLGQYTTAASMDDVDDVRRWLGFEKVNLWGGSYGTRAAQVYLRRHGAHVRAVVLEGVLPVDELVPLHQPATAQRAIDLFL ARNRAAFPDLEGRFRSLFEPPRHPSIGLLEGVRHALYGGDPRAFPDLIRRAAAGDLAPLQQLAIDAEIALSRLSIGLNLS VTCAEDIPFLDDAAIARETAGTFLGDGRIQRQRSACREMGGRPGAGRSARTRALGRSGPALLRRPRSRDSPGIWRARRGH APQ
Sequences:
>Translated_403_residues MGHRFAVLVLAACIGCTRGPTAGGAEVKLHACSLDGIPGEVLCARYPVWEDRDRQAGRRITLNIVVLPALSAPAEPDPDP LVVLAGGPGQAATDLIQAFFRNRELRARRQVVFIDQRGSGGSNPLNCDLYGSPPDPRRILAGPFPVDAVRACRLRLQAVA DLGQYTTAASMDDVDDVRRWLGFEKVNLWGGSYGTRAAQVYLRRHGAHVRAVVLEGVLPVDELVPLHQPATAQRAIDLFL ARNRAAFPDLEGRFRSLFEPPRHPSIGLLEGVRHALYGGDPRAFPDLIRRAAAGDLAPLQQLAIDAEIALSRLSIGLNLS VTCAEDIPFLDDAAIARETAGTFLGDGRIQRQRSACREMGGRPGAGRSARTRALGRSGPALLRRPRSRDSPGIWRARRGH APQ >Mature_402_residues GHRFAVLVLAACIGCTRGPTAGGAEVKLHACSLDGIPGEVLCARYPVWEDRDRQAGRRITLNIVVLPALSAPAEPDPDPL VVLAGGPGQAATDLIQAFFRNRELRARRQVVFIDQRGSGGSNPLNCDLYGSPPDPRRILAGPFPVDAVRACRLRLQAVAD LGQYTTAASMDDVDDVRRWLGFEKVNLWGGSYGTRAAQVYLRRHGAHVRAVVLEGVLPVDELVPLHQPATAQRAIDLFLA RNRAAFPDLEGRFRSLFEPPRHPSIGLLEGVRHALYGGDPRAFPDLIRRAAAGDLAPLQQLAIDAEIALSRLSIGLNLSV TCAEDIPFLDDAAIARETAGTFLGDGRIQRQRSACREMGGRPGAGRSARTRALGRSGPALLRRPRSRDSPGIWRARRGHA PQ
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR013595 [H]
Pfam domain/function: PF00561 Abhydrolase_1; PF08386 Abhydrolase_4 [H]
EC number: NA
Molecular weight: Translated: 43589; Mature: 43458
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHRFAVLVLAACIGCTRGPTAGGAEVKLHACSLDGIPGEVLCARYPVWEDRDRQAGRRI CCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHEECCCCCCCCHHCCCCEE TLNIVVLPALSAPAEPDPDPLVVLAGGPGQAATDLIQAFFRNRELRARRQVVFIDQRGSG EEEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHCCCCEEEEECCCCC GSNPLNCDLYGSPPDPRRILAGPFPVDAVRACRLRLQAVADLGQYTTAASMDDVDDVRRW CCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LGFEKVNLWGGSYGTRAAQVYLRRHGAHVRAVVLEGVLPVDELVPLHQPATAQRAIDLFL HCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEHHHCCCCHHHHCCCCCCHHHHHHHHHHH ARNRAAFPDLEGRFRSLFEPPRHPSIGLLEGVRHALYGGDPRAFPDLIRRAAAGDLAPLQ HCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHH QLAIDAEIALSRLSIGLNLSVTCAEDIPFLDDAAIARETAGTFLGDGRIQRQRSACREMG HHHHHHHHHHHHHEECCEEEEEECCCCCCCCCHHHHHHHCCCHHCCCHHHHHHHHHHHCC GRPGAGRSARTRALGRSGPALLRRPRSRDSPGIWRARRGHAPQ CCCCCCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GHRFAVLVLAACIGCTRGPTAGGAEVKLHACSLDGIPGEVLCARYPVWEDRDRQAGRRI CCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHEECCCCCCCCHHCCCCEE TLNIVVLPALSAPAEPDPDPLVVLAGGPGQAATDLIQAFFRNRELRARRQVVFIDQRGSG EEEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHCCCCEEEEECCCCC GSNPLNCDLYGSPPDPRRILAGPFPVDAVRACRLRLQAVADLGQYTTAASMDDVDDVRRW CCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LGFEKVNLWGGSYGTRAAQVYLRRHGAHVRAVVLEGVLPVDELVPLHQPATAQRAIDLFL HCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEHHHCCCCHHHHCCCCCCHHHHHHHHHHH ARNRAAFPDLEGRFRSLFEPPRHPSIGLLEGVRHALYGGDPRAFPDLIRRAAAGDLAPLQ HCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHH QLAIDAEIALSRLSIGLNLSVTCAEDIPFLDDAAIARETAGTFLGDGRIQRQRSACREMG HHHHHHHHHHHHHEECCEEEEEECCCCCCCCCHHHHHHHCCCHHCCCHHHHHHHHHHHCC GRPGAGRSARTRALGRSGPALLRRPRSRDSPGIWRARRGHAPQ CCCCCCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]