| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621383
Identifier: 116621383
GI number: 116621383
Start: 2890760
End: 2892319
Strand: Direct
Name: 116621383
Synonym: Acid_2264
Alternate gene names: NA
Gene position: 2890760-2892319 (Clockwise)
Preceding gene: 116621381
Following gene: 116621384
Centisome position: 29.01
GC content: 61.92
Gene sequence:
>1560_bases ATGCGATTATCCGTTATACTGGCGCTCGCTGCGGCGGCCTTTTCCGCCGACCGGACGGTGAATCCAGTCTTCGAGAGCCG CGCCGTCATGGCGCCCCAAGGCAAGATCGACCAGCTCGTGTTCGATCGCCTCAAGCACCTGGATATTCAGCCCGCCTACC CGTGCTCCGATGCTGTTTTCCTGCGACGTGTTTATTTGGATGTCATCGGCACGCTGCCCACCGCGCAGGAGGCATCCGCT TTCCTGCAGGACCAGGCGCCGGACAAACGCGGCGCGCTGATCGATCGCCTGCTGGAGCGCGACGAATTCGCCGACTATTG GGCCATGAAGTGGAGCGACCTGCTGCGTGTCAAGGCCGAGTTCCCGATCAACCTCTGGCCCAACGCCGCGCAGGAGTACT TCCACTGGATCCGCGCCGCCATCCGCGAGAATAAGCCGTACGACCGCTTCGTCCGCGAACTGCTCACTGCCAGCGGCAGC AATTTCCGCAACGCGCCGGTCAACTTCTATCGCGCCATGCAGAGCAGGGATCCGTCCGCGATCGCGCAGGCGGTCGCGCT GACTTTCATGGGCACACGCGCCGAGAACTGGCCGAAGCCGCGGCTCACCGGAACGGGCGGATTTTTCGCGCAGCTTGCGT ACAAAGAGACGGGCGAGTGGAAGGAAGAGATCGTCTACTTCAAGCCAGCGTCCGCACCCGCCAGGGCGATCTTCCCCGAT GGCACGCCGGCCAAAATAGCGGCGGACCGCGACCCTCGCGAGGTCTTTGCCGATTGGCTGATCACACCGAAGAACGCCTG GTTCACTCGCAATATCGCCAACCGCGTCTGGAGCTGGCTGCTCGGCCGCGGCATCATTCAGGAGGCGGACGACATCCGCG ACGATAATCCTCCAGTGAACGCCGAGCTGCTGGCGTATCTCGAACAGGAGCTCAGCGGCTCGAAATACGATCTGAAGCAT CTCTATCGATTGATTCTCAACTCGCAGACGTACCAGCTCTCGTCGATTGCGCGCGATGATCACCCAAAGACCAGCGCCGA GGCCGCCGCCAACTTCGCCCAGTATCCGATCCGCCGCCTGGACGCCGAAGTGCTTGCCGACGCGATCTGCGATATCACCG GCACTACCGAGAGCTACACCAGCGCCATCCCCGAGCCCTTTACGTTCATCCCCGAAGGCCAGCGCTCCATCAGCCTGCCG GATGGCAGCATCACCAGCGCCTTCCTGGAACTCTTCGGCCGTCCGCCGCGCGATTCCGGCCTCGAAGTCGAGCGCAACAA CCGGCTCACCGCGGCGCAGCAACTGCATCTGCTGAACTCCAGCCACGTGGAGCGCAAGATCGAGCAGAGTCCGAAATTTC AATACCTGATCCGCAATTCCCGCAACGGGCAGGGCCTGGTCAGCGCGCTCTACCTGATGATTCTTTCGCGCTACCCCACG GAAGAAGAACTCAAGATCGTGAGAGCGTACACGCAGGCCGGAACTTTGAAAGCGCGTGAAGCAACTATCGACCTGGCGTG GGCGCTGATGAACAGCGCCGAATTCCTCTATCGCCACTAA
Upstream 100 bases:
>100_bases CAAGAGTCTATCACCGCACAAGGTGCGCGGGAAGCCTGGCGCGCCTTTTTCGAGACTTCTCCGCGGCTGCGGGGTTGAAC TCGATAGATTGTATTTTAGA
Downstream 100 bases:
>100_bases CGAGGAACAACATGAGCGAGACGAAACTCCATTCCAGTCTTTTGGGCGTGCCCCTCAATCGCCGCGAGGCGCTGCGCCGC GGCCTGTTCGGCGCCTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 519; Mature: 519
Protein sequence:
>519_residues MRLSVILALAAAAFSADRTVNPVFESRAVMAPQGKIDQLVFDRLKHLDIQPAYPCSDAVFLRRVYLDVIGTLPTAQEASA FLQDQAPDKRGALIDRLLERDEFADYWAMKWSDLLRVKAEFPINLWPNAAQEYFHWIRAAIRENKPYDRFVRELLTASGS NFRNAPVNFYRAMQSRDPSAIAQAVALTFMGTRAENWPKPRLTGTGGFFAQLAYKETGEWKEEIVYFKPASAPARAIFPD GTPAKIAADRDPREVFADWLITPKNAWFTRNIANRVWSWLLGRGIIQEADDIRDDNPPVNAELLAYLEQELSGSKYDLKH LYRLILNSQTYQLSSIARDDHPKTSAEAAANFAQYPIRRLDAEVLADAICDITGTTESYTSAIPEPFTFIPEGQRSISLP DGSITSAFLELFGRPPRDSGLEVERNNRLTAAQQLHLLNSSHVERKIEQSPKFQYLIRNSRNGQGLVSALYLMILSRYPT EEELKIVRAYTQAGTLKAREATIDLAWALMNSAEFLYRH
Sequences:
>Translated_519_residues MRLSVILALAAAAFSADRTVNPVFESRAVMAPQGKIDQLVFDRLKHLDIQPAYPCSDAVFLRRVYLDVIGTLPTAQEASA FLQDQAPDKRGALIDRLLERDEFADYWAMKWSDLLRVKAEFPINLWPNAAQEYFHWIRAAIRENKPYDRFVRELLTASGS NFRNAPVNFYRAMQSRDPSAIAQAVALTFMGTRAENWPKPRLTGTGGFFAQLAYKETGEWKEEIVYFKPASAPARAIFPD GTPAKIAADRDPREVFADWLITPKNAWFTRNIANRVWSWLLGRGIIQEADDIRDDNPPVNAELLAYLEQELSGSKYDLKH LYRLILNSQTYQLSSIARDDHPKTSAEAAANFAQYPIRRLDAEVLADAICDITGTTESYTSAIPEPFTFIPEGQRSISLP DGSITSAFLELFGRPPRDSGLEVERNNRLTAAQQLHLLNSSHVERKIEQSPKFQYLIRNSRNGQGLVSALYLMILSRYPT EEELKIVRAYTQAGTLKAREATIDLAWALMNSAEFLYRH >Mature_519_residues MRLSVILALAAAAFSADRTVNPVFESRAVMAPQGKIDQLVFDRLKHLDIQPAYPCSDAVFLRRVYLDVIGTLPTAQEASA FLQDQAPDKRGALIDRLLERDEFADYWAMKWSDLLRVKAEFPINLWPNAAQEYFHWIRAAIRENKPYDRFVRELLTASGS NFRNAPVNFYRAMQSRDPSAIAQAVALTFMGTRAENWPKPRLTGTGGFFAQLAYKETGEWKEEIVYFKPASAPARAIFPD GTPAKIAADRDPREVFADWLITPKNAWFTRNIANRVWSWLLGRGIIQEADDIRDDNPPVNAELLAYLEQELSGSKYDLKH LYRLILNSQTYQLSSIARDDHPKTSAEAAANFAQYPIRRLDAEVLADAICDITGTTESYTSAIPEPFTFIPEGQRSISLP DGSITSAFLELFGRPPRDSGLEVERNNRLTAAQQLHLLNSSHVERKIEQSPKFQYLIRNSRNGQGLVSALYLMILSRYPT EEELKIVRAYTQAGTLKAREATIDLAWALMNSAEFLYRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58771; Mature: 58771
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSVILALAAAAFSADRTVNPVFESRAVMAPQGKIDQLVFDRLKHLDIQPAYPCSDAVF CCHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHH LRRVYLDVIGTLPTAQEASAFLQDQAPDKRGALIDRLLERDEFADYWAMKWSDLLRVKAE HHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FPINLWPNAAQEYFHWIRAAIRENKPYDRFVRELLTASGSNFRNAPVNFYRAMQSRDPSA CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHH IAQAVALTFMGTRAENWPKPRLTGTGGFFAQLAYKETGEWKEEIVYFKPASAPARAIFPD HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCEEEECCCCCCCCEECCC GTPAKIAADRDPREVFADWLITPKNAWFTRNIANRVWSWLLGRGIIQEADDIRDDNPPVN CCCCCEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCC AELLAYLEQELSGSKYDLKHLYRLILNSQTYQLSSIARDDHPKTSAEAAANFAQYPIRRL HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH DAEVLADAICDITGTTESYTSAIPEPFTFIPEGQRSISLPDGSITSAFLELFGRPPRDSG HHHHHHHHHHCCCCCCHHHHHCCCCCCEECCCCCCEEECCCCHHHHHHHHHHCCCCCCCC LEVERNNRLTAAQQLHLLNSSHVERKIEQSPKFQYLIRNSRNGQGLVSALYLMILSRYPT CEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC EEELKIVRAYTQAGTLKAREATIDLAWALMNSAEFLYRH HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRLSVILALAAAAFSADRTVNPVFESRAVMAPQGKIDQLVFDRLKHLDIQPAYPCSDAVF CCHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHH LRRVYLDVIGTLPTAQEASAFLQDQAPDKRGALIDRLLERDEFADYWAMKWSDLLRVKAE HHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FPINLWPNAAQEYFHWIRAAIRENKPYDRFVRELLTASGSNFRNAPVNFYRAMQSRDPSA CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHH IAQAVALTFMGTRAENWPKPRLTGTGGFFAQLAYKETGEWKEEIVYFKPASAPARAIFPD HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCEEEECCCCCCCCEECCC GTPAKIAADRDPREVFADWLITPKNAWFTRNIANRVWSWLLGRGIIQEADDIRDDNPPVN CCCCCEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCC AELLAYLEQELSGSKYDLKHLYRLILNSQTYQLSSIARDDHPKTSAEAAANFAQYPIRRL HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH DAEVLADAICDITGTTESYTSAIPEPFTFIPEGQRSISLPDGSITSAFLELFGRPPRDSG HHHHHHHHHHCCCCCCHHHHHCCCCCCEECCCCCCEEECCCCHHHHHHHHHHCCCCCCCC LEVERNNRLTAAQQLHLLNSSHVERKIEQSPKFQYLIRNSRNGQGLVSALYLMILSRYPT CEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC EEELKIVRAYTQAGTLKAREATIDLAWALMNSAEFLYRH HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA