| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621373
Identifier: 116621373
GI number: 116621373
Start: 2880583
End: 2882517
Strand: Direct
Name: 116621373
Synonym: Acid_2254
Alternate gene names: NA
Gene position: 2880583-2882517 (Clockwise)
Preceding gene: 116621372
Following gene: 116621374
Centisome position: 28.91
GC content: 61.29
Gene sequence:
>1935_bases ATGGCTACACTACCCAGCCCGAGCTTACCCGCCCCACTGCGCCGTATCTGGTATTGGGTCGCCGGCTTTGCGTTATTGGC CGCCGCGGGGGCTTGCATCTATTACTGGATGTTCAGCCGGTTCTCGCCGTGGGACGATGATGGCTACCTCTTAATCGGTA TCCAATCGCTGCTCAAAGGTGATCGTTTATACGATGACATCTACTCCCAATACGGACCTTTCTACTATCTATTTCATTGG ATCGCGTATTCACTGGCGGGACTTCCCGCATCGCACGAGGCTCAACGGTTTATCGGCACCGGCTTGTGGCTCGTTTCGGC GGGTCTCTGGGCGCGCACTACCTACCTGTTAACCAGATCGCTGCTCTGGAGCGCCTTCGGGTTTTTCGTTGGCATTAAGC TCCTGGAATTCTTTCCGTGGTCCGCGGGGCACCCGGAAGAGATCTGCATGGCGCTGCTGGCTGCAATCGCAATTCTGGCT TGCGGCATCACGCCGGGCAACGCCTCGAGAAACGTCATCGGGCTCGGGTTGCTTGTCGCAGCGCTTACTTTGACCAAGGT CAACATGGGCCTGTATGCCGGCGTAGCCGTAGCGCTGTTCCTGTTTCGCATCAGCCCGCCCACAGCCTGGAGGCGGACGG CGGAATGGCTGTTCAGCGCTGCCGCATTGCTGCTGCCCGCCGCCCTTATGGCGACGATGTTCCACTTCGATTGGGCGCGA AACTACGCATTTGTCGCAACCGCTGCCATCGCAACGGCCATCTATGCGGCGCACCGTGTGGAGCTCGCGGTCCTGGTGAC AGAGCGCGCCTGGCGAACCGCGGCAGTCTCGCTCCTGGCTTCCGCGCTGGCGGTGGCGCTTCCCTTCTTCTTTCGCGGAA CTACCCTCCAGGCACTGCTTCGGATGACGGTGTTGCAGCACGCCGGGACGGCGCGGAACTGGTTTCTGGTCGCTCCCATC GGAGCCAAGGTTGTGCTGTGTATGCTCGTGTCGGCGGGCATGCTGGCAATCGCGTATGGGCTGGTTCGGAGGACCGCGAG GGATGTGTCCGGATGGACCGGCCCCGCGCTTCTCGGCTTGAAAGCGGCGGTCGGACTCACAGCCCTGCTGGCATTGAGCA CGCGAAATATCCGCGCCGATAACCCAATCATCTTCTGCTACTGCGTGCCCTTCATGTGGCTAATCCTGGTGGGGCCGGAC GATGAAACAACACGGGCGACACGAATCGGCAGAATGGCGCTCTGCTTTCTCGCGGTGTTCACTTACCTTTACGCATTTCC CGTAGCCGGAGCGCAAGTCCTATTCGCCAGCGTGCCGGCGGCGATTGCCGCGATCGTACTGCTGCGCGATGCGGCGTCGG AGATCGCGCGGGCAGTTCCGGCGGCGTTGCGGGCGAACGGCCTCTATCGGCTGGCGCCGGCGCTGGGATGCGTGGTGCTG ATCGCGCTATTTGCGGTGGATATCTACGATGGCCATCGGAAGTACGCAGGCGGAGTGTCCCTGGGAATGCCCGGGGCTGC CAGAATCCGGGTGGAGCCGCAGGAATCGGCCGCATACCGGTGGATCGCCAATAATGTTCGGTCGTGCAGTGCGCTGTACT CGATGCCGGGCCAGTTCAGCCTGAATTTGTGGACGGCCTTGAAATCGCCGACGGATCTCACGGCGGGCAATTGGGCCGGG CTGCTCGACAACGGGCAGCAGCAGGCCGTGGTACGGGATCTCTCGCGGTATCCCGGATTGTGCATCGTCTATACTCCGGA GCTGGTGAAAGAGTGGGGCCGTGGACAAGATCTTTCGAAATCCCCGCTGGCCCGGTACATCCGCGAGGAGTTTGTGACGG TCGCCGGTTCGGACGGAAACTTCATTTTGAAAAGGAAGGACCTGGCCGCTCCGGCTGTGGCTCACGCGAGTAATTCGCAG GCCAATGATCAGTAG
Upstream 100 bases:
>100_bases ATCCACCAGTCGAGCTTTCGAACACGTGCGCCCGGTCCAAATTGTTGCAAAGTGAGCTTCAGTCTGCGATTCTCGTTTGA CACCCAGAGTTGCCCAGACC
Downstream 100 bases:
>100_bases GGGCGAGGGGCCGGCAGTTCTCCAGCGAGTACTTCTCCCGGGAGTACAATACGTGCGTGCGGCGCAGAAATTTTCTTGGC GTAGCGGGCGGGGCAGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 644; Mature: 643
Protein sequence:
>644_residues MATLPSPSLPAPLRRIWYWVAGFALLAAAGACIYYWMFSRFSPWDDDGYLLIGIQSLLKGDRLYDDIYSQYGPFYYLFHW IAYSLAGLPASHEAQRFIGTGLWLVSAGLWARTTYLLTRSLLWSAFGFFVGIKLLEFFPWSAGHPEEICMALLAAIAILA CGITPGNASRNVIGLGLLVAALTLTKVNMGLYAGVAVALFLFRISPPTAWRRTAEWLFSAAALLLPAALMATMFHFDWAR NYAFVATAAIATAIYAAHRVELAVLVTERAWRTAAVSLLASALAVALPFFFRGTTLQALLRMTVLQHAGTARNWFLVAPI GAKVVLCMLVSAGMLAIAYGLVRRTARDVSGWTGPALLGLKAAVGLTALLALSTRNIRADNPIIFCYCVPFMWLILVGPD DETTRATRIGRMALCFLAVFTYLYAFPVAGAQVLFASVPAAIAAIVLLRDAASEIARAVPAALRANGLYRLAPALGCVVL IALFAVDIYDGHRKYAGGVSLGMPGAARIRVEPQESAAYRWIANNVRSCSALYSMPGQFSLNLWTALKSPTDLTAGNWAG LLDNGQQQAVVRDLSRYPGLCIVYTPELVKEWGRGQDLSKSPLARYIREEFVTVAGSDGNFILKRKDLAAPAVAHASNSQ ANDQ
Sequences:
>Translated_644_residues MATLPSPSLPAPLRRIWYWVAGFALLAAAGACIYYWMFSRFSPWDDDGYLLIGIQSLLKGDRLYDDIYSQYGPFYYLFHW IAYSLAGLPASHEAQRFIGTGLWLVSAGLWARTTYLLTRSLLWSAFGFFVGIKLLEFFPWSAGHPEEICMALLAAIAILA CGITPGNASRNVIGLGLLVAALTLTKVNMGLYAGVAVALFLFRISPPTAWRRTAEWLFSAAALLLPAALMATMFHFDWAR NYAFVATAAIATAIYAAHRVELAVLVTERAWRTAAVSLLASALAVALPFFFRGTTLQALLRMTVLQHAGTARNWFLVAPI GAKVVLCMLVSAGMLAIAYGLVRRTARDVSGWTGPALLGLKAAVGLTALLALSTRNIRADNPIIFCYCVPFMWLILVGPD DETTRATRIGRMALCFLAVFTYLYAFPVAGAQVLFASVPAAIAAIVLLRDAASEIARAVPAALRANGLYRLAPALGCVVL IALFAVDIYDGHRKYAGGVSLGMPGAARIRVEPQESAAYRWIANNVRSCSALYSMPGQFSLNLWTALKSPTDLTAGNWAG LLDNGQQQAVVRDLSRYPGLCIVYTPELVKEWGRGQDLSKSPLARYIREEFVTVAGSDGNFILKRKDLAAPAVAHASNSQ ANDQ >Mature_643_residues ATLPSPSLPAPLRRIWYWVAGFALLAAAGACIYYWMFSRFSPWDDDGYLLIGIQSLLKGDRLYDDIYSQYGPFYYLFHWI AYSLAGLPASHEAQRFIGTGLWLVSAGLWARTTYLLTRSLLWSAFGFFVGIKLLEFFPWSAGHPEEICMALLAAIAILAC GITPGNASRNVIGLGLLVAALTLTKVNMGLYAGVAVALFLFRISPPTAWRRTAEWLFSAAALLLPAALMATMFHFDWARN YAFVATAAIATAIYAAHRVELAVLVTERAWRTAAVSLLASALAVALPFFFRGTTLQALLRMTVLQHAGTARNWFLVAPIG AKVVLCMLVSAGMLAIAYGLVRRTARDVSGWTGPALLGLKAAVGLTALLALSTRNIRADNPIIFCYCVPFMWLILVGPDD ETTRATRIGRMALCFLAVFTYLYAFPVAGAQVLFASVPAAIAAIVLLRDAASEIARAVPAALRANGLYRLAPALGCVVLI ALFAVDIYDGHRKYAGGVSLGMPGAARIRVEPQESAAYRWIANNVRSCSALYSMPGQFSLNLWTALKSPTDLTAGNWAGL LDNGQQQAVVRDLSRYPGLCIVYTPELVKEWGRGQDLSKSPLARYIREEFVTVAGSDGNFILKRKDLAAPAVAHASNSQA NDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69888; Mature: 69757
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLPSPSLPAPLRRIWYWVAGFALLAAAGACIYYWMFSRFSPWDDDGYLLIGIQSLLKG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCC DRLYDDIYSQYGPFYYLFHWIAYSLAGLPASHEAQRFIGTGLWLVSAGLWARTTYLLTRS CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LLWSAFGFFVGIKLLEFFPWSAGHPEEICMALLAAIAILACGITPGNASRNVIGLGLLVA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH ALTLTKVNMGLYAGVAVALFLFRISPPTAWRRTAEWLFSAAALLLPAALMATMFHFDWAR HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NYAFVATAAIATAIYAAHRVELAVLVTERAWRTAAVSLLASALAVALPFFFRGTTLQALL CHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH RMTVLQHAGTARNWFLVAPIGAKVVLCMLVSAGMLAIAYGLVRRTARDVSGWTGPALLGL HHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH KAAVGLTALLALSTRNIRADNPIIFCYCVPFMWLILVGPDDETTRATRIGRMALCFLAVF HHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHH TYLYAFPVAGAQVLFASVPAAIAAIVLLRDAASEIARAVPAALRANGLYRLAPALGCVVL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IALFAVDIYDGHRKYAGGVSLGMPGAARIRVEPQESAAYRWIANNVRSCSALYSMPGQFS HHHHHHHHHCCCHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEE LNLWTALKSPTDLTAGNWAGLLDNGQQQAVVRDLSRYPGLCIVYTPELVKEWGRGQDLSK EHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCEEEEECHHHHHHCCCCCCCCC SPLARYIREEFVTVAGSDGNFILKRKDLAAPAVAHASNSQANDQ CHHHHHHHHHHEEEECCCCCEEEEECCCCCCHHHCCCCCCCCCC >Mature Secondary Structure ATLPSPSLPAPLRRIWYWVAGFALLAAAGACIYYWMFSRFSPWDDDGYLLIGIQSLLKG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHCC DRLYDDIYSQYGPFYYLFHWIAYSLAGLPASHEAQRFIGTGLWLVSAGLWARTTYLLTRS CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LLWSAFGFFVGIKLLEFFPWSAGHPEEICMALLAAIAILACGITPGNASRNVIGLGLLVA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH ALTLTKVNMGLYAGVAVALFLFRISPPTAWRRTAEWLFSAAALLLPAALMATMFHFDWAR HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NYAFVATAAIATAIYAAHRVELAVLVTERAWRTAAVSLLASALAVALPFFFRGTTLQALL CHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH RMTVLQHAGTARNWFLVAPIGAKVVLCMLVSAGMLAIAYGLVRRTARDVSGWTGPALLGL HHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH KAAVGLTALLALSTRNIRADNPIIFCYCVPFMWLILVGPDDETTRATRIGRMALCFLAVF HHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHH TYLYAFPVAGAQVLFASVPAAIAAIVLLRDAASEIARAVPAALRANGLYRLAPALGCVVL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IALFAVDIYDGHRKYAGGVSLGMPGAARIRVEPQESAAYRWIANNVRSCSALYSMPGQFS HHHHHHHHHCCCHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEE LNLWTALKSPTDLTAGNWAGLLDNGQQQAVVRDLSRYPGLCIVYTPELVKEWGRGQDLSK EHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCEEEEECHHHHHHCCCCCCCCC SPLARYIREEFVTVAGSDGNFILKRKDLAAPAVAHASNSQANDQ CHHHHHHHHHHEEEECCCCCEEEEECCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA