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The map label for this gene is 116621352

Identifier: 116621352

GI number: 116621352

Start: 2857834

End: 2858691

Strand: Reverse

Name: 116621352

Synonym: Acid_2233

Alternate gene names: NA

Gene position: 2858691-2857834 (Counterclockwise)

Preceding gene: 116621355

Following gene: 116621351

Centisome position: 28.69

GC content: 65.5

Gene sequence:

>858_bases
ATGCCAGCACACTACCCCATCGCAGCCATCACCGACGAGTTCTCGCCGGACATCGAAGTTGCCGTTCACTCCATGACCGA
AATCGGTATGACCGGCGCCGAACTCCGCATGGTATTCGGCAAGAACATCGTCGATCTCACCGATGAAGAGCTCGACCGCG
CCATCGCCATCGTCAAGGGCGCCGGCCTCGAGATCATCTCCATCTCCTCGCCCCTGCTGAAGTGCGTCCTGCCCGACGCT
CCCGAAATCGACGCCCGCTTCCAGCAGGACATGTTCGCCGCCAAGCATACCTTCGCCGACCAGCCCCGCCTCACCGCTCG
CGCCTTCGAGATCGCCCGCCGCACCGGCGCCCGCATCATCCGCGTTTTCACCTACTGGCGCACCGTCGATCCCGACGCCT
GCTTCGATCGCGTCGTGGCCGCCCTGCGCGAACTCGCCGACCAGGCCGCCGCGCACAACGTAATCATCGGCCTCGAAAAC
GAACACGCCTGTAACGTCGCCACCGGAGCCGAGACGGCCCGCGTTCTCGCCGCCCTCGATCACCCCAATCTCAAGGTGGT
TTGGGATCCCGCCAACGCCGTGGTCTCCGGCGAGAAGGCATTCCCTGAAGGCTACGGCAAGCTGCCTGTCGCGCGCATTC
AACACGTGCATGCCAAGGATTGCACCATGGACGGCCACAAGCCCTTGTGGTGCGCGATCGGCGATGGCGTCGTCGGCTGG
CGCGGCCAGGTCGATGCCCTCGTCCGCGACGGCTACCGCGGCTGGATCAGCCTCGAGACGCACTGGCCCGGCCCCGGCGG
CAACAAGCACGAGGCCAGCATGATCTGCGGCCGCCGCCTGATCGAACTGGTGCAATAA

Upstream 100 bases:

>100_bases
CGACCGCGGCACTATCTCTACAGAACTGGCAAGCGTGGGCATCTTGCTATTCTCGCACTCTTGGTTTTCCCTCTTCGCGC
CCCTCTATAATGGAGCTTTC

Downstream 100 bases:

>100_bases
AGGAGCAAGGCGATGCCTGATGATCAAGAGTTTCCCCCCGACCTCGACGTCCTGATCCGGACCGGCATCTCCGATCCGAT
CGCCATCGGGCTCGCGCAAA

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Sugar Phosphate Isomerase/Epimerase; TIM Barrel Xylose Isomerase; Xylose Isomerase Domain-Containing Protein TIM Barrel

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MPAHYPIAAITDEFSPDIEVAVHSMTEIGMTGAELRMVFGKNIVDLTDEELDRAIAIVKGAGLEIISISSPLLKCVLPDA
PEIDARFQQDMFAAKHTFADQPRLTARAFEIARRTGARIIRVFTYWRTVDPDACFDRVVAALRELADQAAAHNVIIGLEN
EHACNVATGAETARVLAALDHPNLKVVWDPANAVVSGEKAFPEGYGKLPVARIQHVHAKDCTMDGHKPLWCAIGDGVVGW
RGQVDALVRDGYRGWISLETHWPGPGGNKHEASMICGRRLIELVQ

Sequences:

>Translated_285_residues
MPAHYPIAAITDEFSPDIEVAVHSMTEIGMTGAELRMVFGKNIVDLTDEELDRAIAIVKGAGLEIISISSPLLKCVLPDA
PEIDARFQQDMFAAKHTFADQPRLTARAFEIARRTGARIIRVFTYWRTVDPDACFDRVVAALRELADQAAAHNVIIGLEN
EHACNVATGAETARVLAALDHPNLKVVWDPANAVVSGEKAFPEGYGKLPVARIQHVHAKDCTMDGHKPLWCAIGDGVVGW
RGQVDALVRDGYRGWISLETHWPGPGGNKHEASMICGRRLIELVQ
>Mature_284_residues
PAHYPIAAITDEFSPDIEVAVHSMTEIGMTGAELRMVFGKNIVDLTDEELDRAIAIVKGAGLEIISISSPLLKCVLPDAP
EIDARFQQDMFAAKHTFADQPRLTARAFEIARRTGARIIRVFTYWRTVDPDACFDRVVAALRELADQAAAHNVIIGLENE
HACNVATGAETARVLAALDHPNLKVVWDPANAVVSGEKAFPEGYGKLPVARIQHVHAKDCTMDGHKPLWCAIGDGVVGWR
GQVDALVRDGYRGWISLETHWPGPGGNKHEASMICGRRLIELVQ

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31172; Mature: 31041

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAHYPIAAITDEFSPDIEVAVHSMTEIGMTGAELRMVFGKNIVDLTDEELDRAIAIVKG
CCCCCCCEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHEEEEEC
AGLEIISISSPLLKCVLPDAPEIDARFQQDMFAAKHTFADQPRLTARAFEIARRTGARII
CCEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEE
RVFTYWRTVDPDACFDRVVAALRELADQAAAHNVIIGLENEHACNVATGAETARVLAALD
EEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHEEC
HPNLKVVWDPANAVVSGEKAFPEGYGKLPVARIQHVHAKDCTMDGHKPLWCAIGDGVVGW
CCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC
RGQVDALVRDGYRGWISLETHWPGPGGNKHEASMICGRRLIELVQ
CCCHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
PAHYPIAAITDEFSPDIEVAVHSMTEIGMTGAELRMVFGKNIVDLTDEELDRAIAIVKG
CCCCCCEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHEEEEEC
AGLEIISISSPLLKCVLPDAPEIDARFQQDMFAAKHTFADQPRLTARAFEIARRTGARII
CCEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEE
RVFTYWRTVDPDACFDRVVAALRELADQAAAHNVIIGLENEHACNVATGAETARVLAALD
EEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHHHHEEC
HPNLKVVWDPANAVVSGEKAFPEGYGKLPVARIQHVHAKDCTMDGHKPLWCAIGDGVVGW
CCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC
RGQVDALVRDGYRGWISLETHWPGPGGNKHEASMICGRRLIELVQ
CCCHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA