| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621280
Identifier: 116621280
GI number: 116621280
Start: 2764623
End: 2766239
Strand: Reverse
Name: 116621280
Synonym: Acid_2161
Alternate gene names: NA
Gene position: 2766239-2764623 (Counterclockwise)
Preceding gene: 116621282
Following gene: 116621279
Centisome position: 27.76
GC content: 58.94
Gene sequence:
>1617_bases ATGAATGGTGCGATGCTCGATTGTGGCTCGACACGCCGAGCTGTGCCCCTGTCGAAAGCTTTGACCTGCGCGCTGCCGGC TCTGCTTGTCGCCTCGTTGTGCCTCCTTCCGCTACTCAATAAGCCGTTCCTGATCGACGATCCGGAGTACCTCGGCATGG CGAAGCAGATTGTGAAACATCCGTTGCATCCGATGGATTTCAGAATCTGCTGGAATATGGCTCCTTGCACCAAGCTCTAC AACGTCACCCCCGGGAACACGCTAATGGGGTACGCGCTGGTTCCCACGGTTCTGCTCGGTAGCACGGAGTGGATGGCACA TCTCACACAGGTTGTTTTCGTCTGGGCTGCCGTAATCGCGATGTCCGCGTTTTTACTTCGGTCCGGCTACAGTTCCGGCG ACGCAACTTCAGGAGCCCTGTTTTTGGTGGCGATACCTCCATTCCTGCCGATGGCCAGCACGGCCATGCCGGATATTCTG GCGACGGCGCTTGGGGTCTTGTCATTTGAGCGCCTTGCCGCGTGGAAGGCTTTCGGGAAATGGGACCAGGGGGCGGGGGC AGGCGTCGCCCTGGGACTCGCAGGAATCGCGCGCCCCCATTTGTCGTTACTGCTGCCGCTCGCGGTTTTCTATCTGTTCG AGAGCGTGAACCCCAAGGACATGCTGGCACAGATCCGCGAGAAGAGCGTGATGTGGCTTCCCGTCCTGATCGGTGTTTGT GTGCTGCTCGGAGTCATCCTGGCCACACGGGAGACCACCCTGTCGCTGGATCCCCCCGCCGCGGCCAGGGGATTCCATAA AATTCCGAAGAACCTCCTCGCGTACCTCGGGTACCTGTGCTTCCCACTACCGCTCGCTGCTTACTGGATAGCGGCTCGCT GGCGAACTTACCCACACCGGTTCGTGATCGCGGTGCTGACTCTCGCGACGGCCGGAATGCTACTTAAGCCACTATGGTAT GGCTTTGCCATTGTGAGCGGCGTGATGCTGGCAGAGCTGCTTTTGCAGGCGTTGCGCAAGCGGGACCACATGGAGATGTT CCTGGCGCTTTGGCTGCTCGTTCCGCTACCGATCGTTTATTACTTCCACCTGCCGCTTAAGTACTTACTCCCGTGTATGC CAGCAGTCATTATCACATGCTTCCGGCTGGGCTCCTGTCTGTCCAATCGAACCTTCCGTGGCGCCAAGGTTCTGACAATT TGGACTGGGGTCATATTTTCCATCCTGATTCTGCGCTCCGACGCGGAACTTGCCGAATTTGGCCGGACTGCCCTGGAAAG CCTGATCCGACCACATGTGGCGGCCGGGGAAAAGGTTTGGTACGGCGGAGAATTCTCCGTCTACTGGTACGCGCGGTTCG CAGGCGCCGAACTGCTGGTGCCCGGTGAACGCGAACCAAAGCCTGGAGACCTACTCGCGATCGGCCGCTGGGAAGGCGGA GACACTGCGCTCGACATGTTTCCGAAACGCACACTGCTGCAATCGATTTCGCACCGGTACAGTTTCGGCAGAACGATGGG AGCGGGAATTGGACTCTACACCAATGTCCTGGGCTTCTGGCCGTGGGGATTCGGCAGCAGTGAGCTTGACCGGTACGAGA TCTGGCGGATAGACTGA
Upstream 100 bases:
>100_bases CCAGCGGCGCGACTCGGATTCAACATTATCGGAGACAACCCAGGGCCATGCTACCATGCAAAGGCATGTTTGAGCTGATC CTGCGCCTTTTGGTTGCTGT
Downstream 100 bases:
>100_bases GCCAAGGATTGCCGAAGGCAGGAGATCGAAGAACTCGATCCGGACAGGGTGACTCCGCCACATAGCCGCATATGCTGGAA ACAATTAAGAGGCAGCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 538; Mature: 538
Protein sequence:
>538_residues MNGAMLDCGSTRRAVPLSKALTCALPALLVASLCLLPLLNKPFLIDDPEYLGMAKQIVKHPLHPMDFRICWNMAPCTKLY NVTPGNTLMGYALVPTVLLGSTEWMAHLTQVVFVWAAVIAMSAFLLRSGYSSGDATSGALFLVAIPPFLPMASTAMPDIL ATALGVLSFERLAAWKAFGKWDQGAGAGVALGLAGIARPHLSLLLPLAVFYLFESVNPKDMLAQIREKSVMWLPVLIGVC VLLGVILATRETTLSLDPPAAARGFHKIPKNLLAYLGYLCFPLPLAAYWIAARWRTYPHRFVIAVLTLATAGMLLKPLWY GFAIVSGVMLAELLLQALRKRDHMEMFLALWLLVPLPIVYYFHLPLKYLLPCMPAVIITCFRLGSCLSNRTFRGAKVLTI WTGVIFSILILRSDAELAEFGRTALESLIRPHVAAGEKVWYGGEFSVYWYARFAGAELLVPGEREPKPGDLLAIGRWEGG DTALDMFPKRTLLQSISHRYSFGRTMGAGIGLYTNVLGFWPWGFGSSELDRYEIWRID
Sequences:
>Translated_538_residues MNGAMLDCGSTRRAVPLSKALTCALPALLVASLCLLPLLNKPFLIDDPEYLGMAKQIVKHPLHPMDFRICWNMAPCTKLY NVTPGNTLMGYALVPTVLLGSTEWMAHLTQVVFVWAAVIAMSAFLLRSGYSSGDATSGALFLVAIPPFLPMASTAMPDIL ATALGVLSFERLAAWKAFGKWDQGAGAGVALGLAGIARPHLSLLLPLAVFYLFESVNPKDMLAQIREKSVMWLPVLIGVC VLLGVILATRETTLSLDPPAAARGFHKIPKNLLAYLGYLCFPLPLAAYWIAARWRTYPHRFVIAVLTLATAGMLLKPLWY GFAIVSGVMLAELLLQALRKRDHMEMFLALWLLVPLPIVYYFHLPLKYLLPCMPAVIITCFRLGSCLSNRTFRGAKVLTI WTGVIFSILILRSDAELAEFGRTALESLIRPHVAAGEKVWYGGEFSVYWYARFAGAELLVPGEREPKPGDLLAIGRWEGG DTALDMFPKRTLLQSISHRYSFGRTMGAGIGLYTNVLGFWPWGFGSSELDRYEIWRID >Mature_538_residues MNGAMLDCGSTRRAVPLSKALTCALPALLVASLCLLPLLNKPFLIDDPEYLGMAKQIVKHPLHPMDFRICWNMAPCTKLY NVTPGNTLMGYALVPTVLLGSTEWMAHLTQVVFVWAAVIAMSAFLLRSGYSSGDATSGALFLVAIPPFLPMASTAMPDIL ATALGVLSFERLAAWKAFGKWDQGAGAGVALGLAGIARPHLSLLLPLAVFYLFESVNPKDMLAQIREKSVMWLPVLIGVC VLLGVILATRETTLSLDPPAAARGFHKIPKNLLAYLGYLCFPLPLAAYWIAARWRTYPHRFVIAVLTLATAGMLLKPLWY GFAIVSGVMLAELLLQALRKRDHMEMFLALWLLVPLPIVYYFHLPLKYLLPCMPAVIITCFRLGSCLSNRTFRGAKVLTI WTGVIFSILILRSDAELAEFGRTALESLIRPHVAAGEKVWYGGEFSVYWYARFAGAELLVPGEREPKPGDLLAIGRWEGG DTALDMFPKRTLLQSISHRYSFGRTMGAGIGLYTNVLGFWPWGFGSSELDRYEIWRID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59355; Mature: 59355
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGAMLDCGSTRRAVPLSKALTCALPALLVASLCLLPLLNKPFLIDDPEYLGMAKQIVKH CCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHC PLHPMDFRICWNMAPCTKLYNVTPGNTLMGYALVPTVLLGSTEWMAHLTQVVFVWAAVIA CCCCCCEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH MSAFLLRSGYSSGDATSGALFLVAIPPFLPMASTAMPDILATALGVLSFERLAAWKAFGK HHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WDQGAGAGVALGLAGIARPHLSLLLPLAVFYLFESVNPKDMLAQIREKSVMWLPVLIGVC CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHH VLLGVILATRETTLSLDPPAAARGFHKIPKNLLAYLGYLCFPLPLAAYWIAARWRTYPHR HHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH FVIAVLTLATAGMLLKPLWYGFAIVSGVMLAELLLQALRKRDHMEMFLALWLLVPLPIVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFHLPLKYLLPCMPAVIITCFRLGSCLSNRTFRGAKVLTIWTGVIFSILILRSDAELAEF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH GRTALESLIRPHVAAGEKVWYGGEFSVYWYARFAGAELLVPGEREPKPGDLLAIGRWEGG HHHHHHHHHCCHHCCCCEEEECCEEEEEEEEEECCCEEECCCCCCCCCCCEEEEECCCCC DTALDMFPKRTLLQSISHRYSFGRTMGAGIGLYTNVLGFWPWGFGSSELDRYEIWRID CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEEEECC >Mature Secondary Structure MNGAMLDCGSTRRAVPLSKALTCALPALLVASLCLLPLLNKPFLIDDPEYLGMAKQIVKH CCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHC PLHPMDFRICWNMAPCTKLYNVTPGNTLMGYALVPTVLLGSTEWMAHLTQVVFVWAAVIA CCCCCCEEEEECCCCHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH MSAFLLRSGYSSGDATSGALFLVAIPPFLPMASTAMPDILATALGVLSFERLAAWKAFGK HHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC WDQGAGAGVALGLAGIARPHLSLLLPLAVFYLFESVNPKDMLAQIREKSVMWLPVLIGVC CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHH VLLGVILATRETTLSLDPPAAARGFHKIPKNLLAYLGYLCFPLPLAAYWIAARWRTYPHR HHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH FVIAVLTLATAGMLLKPLWYGFAIVSGVMLAELLLQALRKRDHMEMFLALWLLVPLPIVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFHLPLKYLLPCMPAVIITCFRLGSCLSNRTFRGAKVLTIWTGVIFSILILRSDAELAEF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH GRTALESLIRPHVAAGEKVWYGGEFSVYWYARFAGAELLVPGEREPKPGDLLAIGRWEGG HHHHHHHHHCCHHCCCCEEEECCEEEEEEEEEECCCEEECCCCCCCCCCCEEEEECCCCC DTALDMFPKRTLLQSISHRYSFGRTMGAGIGLYTNVLGFWPWGFGSSELDRYEIWRID CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA