| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621242
Identifier: 116621242
GI number: 116621242
Start: 2721733
End: 2723550
Strand: Direct
Name: 116621242
Synonym: Acid_2123
Alternate gene names: NA
Gene position: 2721733-2723550 (Clockwise)
Preceding gene: 116621241
Following gene: 116621243
Centisome position: 27.31
GC content: 56.77
Gene sequence:
>1818_bases ATGCCATTTGAACCAATCGAAAACTACGGTGTGATTGGGAACATGCAGTCGATCGCGCTCGTTGGGATGAACGGCTCGGT TGATTTTCTCTGCTACCCGAACTTCGATTCCCCCACCATCTTCGCCGCTCTTCTCGATGATCGGAAGGGTGGGTGCTTCA AAATTAGTCCGCAACTCACGAACGCGCGGGTGCGTCAGATGTACCTTCCAGACACGAACATTCTGATCACGCGATTCCTG GCTGACGAAGGTGTGGCCGAACTGACGGACTATATGCCCATTGATAGTCAGGGCGGGGAACCCAATGAGATCGTGCGCAA GGTGGCCGTGATTCGGGGCGATGTGCGTTTCCAGATGTGCTGCGAGCCACGGTTCTCCTATGCGACCTGCGGGCATCGAG TCGAACTTTCGGAAGCGTGTGCGACGTTCTACCCGTTTTCCAATACTTGCCCGGCAATGTCGCTACACTCCACAGTCGGG CTCGGGCAGCGCGGCGATGATGTCACCGCGGATTTTCGTTTGAAGGCAGGCCAGACGGCAATGTTCCTGTTCGGCCGCGT TCGCGGTGAAGGTGAGGAGCCGGAAATGGAGCTTCTGGACCAACGCTTCCGTCATACGGCTCAGTTCTGGAAGGCGTGGA TCGCCAAGTCGAAATACAAAGGGCGCTGGCGGGAAGTGGTTCAACGTTCGGCCTTGACGCTAAAGCTGCTGATTAGCCGT GAGCATGGCTCGCTGATCGCTGCACCCACATTTTCCTTGCCGGAAAATATCGGCGGAGTGCGCAATTGGGATTATCGCTA CACCTGGCTGCGCGATGCGACGTTCACGCTGTATGCCCTTATCCGCTTGGGTTTCATCGACGAGACCGAGGCGTTCATCG GTTGGTTAAAGGGCCGTCTGAGCGACGATGCGCAAAGAGGTCCGTTGCAGGTCATGTACGGCATTGATGGTAGACAGGAG CTGGAGGAATTCTCCTTAGATCAGTTTTGCGGTTACGAGAATTCACGGCCGGTCCGGATCGGCAACGCTGCTTACCAGCA ACTGCAACTCGACATTTATGGGGAGATGATGGATTCCATCTATCTGGCCAACAAGTATGGCAAGCCGATCTCGCACGCGG GATGGCGCGAGGTTCAGCGCCTGTTGGATTGGCTGCGGAACAATTGGCGGCGTCCCGACGAGGGTATCTGGGAGGTTCGC GGAGGACCCAGAGAGTTCCTGCATTCCCGCGTCATGTGCTGGGTCGCGTTCGATCGCGCGTTGCGGCTGGCACATAAGCG GTCGCTTTCGGGACCGCTCGAGGTCTGGCAGCAAACCAGGGACGAGATTCGGGATGACATCTTCACGAATTTCTGGAACG ATGAACTGAAATCGTTTGTGCAGGCCAAGGGCACCAAAGATCTCGATGCCGCGGCGCTGCTGATGCCGATGATGCGGTTC ATCAGCCCGGTGGATCCGATGTGGCTATCCACCATGAAAGCCATCGAGGACCACCTGGTGGAAGATACCCTGGTGCGGCG CTATGAAGTCGAACGCACTCAGGTAGACGGCCTGCCGGGAACCGAGGGCAGTTTCACGGCCTGCTCGTTTTGGTACGTAG AATGTCTGGCTCGGGCCGGCGAGTTGGAAAGAGCTCAATTATTATTTGAAAAACTTTTGGGTTACGCGAACCATCTTGGA CTGTATTCCGAAGAACTGGGTGCCGACGGGCGGCATCTAGGAAATTTCCCGCAAGCGTTCACGCACCTCGCGCTGATCAG CGCGGCGACTTATCTCGACCGGGCTCTATCGGGCCCAAACGATGCAACTTGGCGGTAG
Upstream 100 bases:
>100_bases TCTGAGGGTGGTCCGGGAGTGATACCATGCCTGAAAAAGCGAGTCTTCAGGCAACCAGGATCATCCAAATGCCTGAGCCG GCTCTTGTAGCGGTTGCCTC
Downstream 100 bases:
>100_bases CGAAGGCTCGGCGAGGATTCGGGATTGCCGGCACCCCGCTCCGCCCATCATCTCTCCATGCAATCATGGTCGAAACATGC CATCCGAACTTCCCCGCCGG
Product: glycoside hydrolase 15-like protein
Products: NA
Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glucoamylase; Glycoside Hydrolase Family Protein; Trehalose-Phosphatase; Glucoamylase-Like Glycosyl Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Trehalose 6-Phosphatase; Trehalose-Phosphatase/Glycoside Hydrolase; Trehalose Phosphatase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Protein; Glycosyl Hydrolase Glucoamylase
Number of amino acids: Translated: 605; Mature: 604
Protein sequence:
>605_residues MPFEPIENYGVIGNMQSIALVGMNGSVDFLCYPNFDSPTIFAALLDDRKGGCFKISPQLTNARVRQMYLPDTNILITRFL ADEGVAELTDYMPIDSQGGEPNEIVRKVAVIRGDVRFQMCCEPRFSYATCGHRVELSEACATFYPFSNTCPAMSLHSTVG LGQRGDDVTADFRLKAGQTAMFLFGRVRGEGEEPEMELLDQRFRHTAQFWKAWIAKSKYKGRWREVVQRSALTLKLLISR EHGSLIAAPTFSLPENIGGVRNWDYRYTWLRDATFTLYALIRLGFIDETEAFIGWLKGRLSDDAQRGPLQVMYGIDGRQE LEEFSLDQFCGYENSRPVRIGNAAYQQLQLDIYGEMMDSIYLANKYGKPISHAGWREVQRLLDWLRNNWRRPDEGIWEVR GGPREFLHSRVMCWVAFDRALRLAHKRSLSGPLEVWQQTRDEIRDDIFTNFWNDELKSFVQAKGTKDLDAAALLMPMMRF ISPVDPMWLSTMKAIEDHLVEDTLVRRYEVERTQVDGLPGTEGSFTACSFWYVECLARAGELERAQLLFEKLLGYANHLG LYSEELGADGRHLGNFPQAFTHLALISAATYLDRALSGPNDATWR
Sequences:
>Translated_605_residues MPFEPIENYGVIGNMQSIALVGMNGSVDFLCYPNFDSPTIFAALLDDRKGGCFKISPQLTNARVRQMYLPDTNILITRFL ADEGVAELTDYMPIDSQGGEPNEIVRKVAVIRGDVRFQMCCEPRFSYATCGHRVELSEACATFYPFSNTCPAMSLHSTVG LGQRGDDVTADFRLKAGQTAMFLFGRVRGEGEEPEMELLDQRFRHTAQFWKAWIAKSKYKGRWREVVQRSALTLKLLISR EHGSLIAAPTFSLPENIGGVRNWDYRYTWLRDATFTLYALIRLGFIDETEAFIGWLKGRLSDDAQRGPLQVMYGIDGRQE LEEFSLDQFCGYENSRPVRIGNAAYQQLQLDIYGEMMDSIYLANKYGKPISHAGWREVQRLLDWLRNNWRRPDEGIWEVR GGPREFLHSRVMCWVAFDRALRLAHKRSLSGPLEVWQQTRDEIRDDIFTNFWNDELKSFVQAKGTKDLDAAALLMPMMRF ISPVDPMWLSTMKAIEDHLVEDTLVRRYEVERTQVDGLPGTEGSFTACSFWYVECLARAGELERAQLLFEKLLGYANHLG LYSEELGADGRHLGNFPQAFTHLALISAATYLDRALSGPNDATWR >Mature_604_residues PFEPIENYGVIGNMQSIALVGMNGSVDFLCYPNFDSPTIFAALLDDRKGGCFKISPQLTNARVRQMYLPDTNILITRFLA DEGVAELTDYMPIDSQGGEPNEIVRKVAVIRGDVRFQMCCEPRFSYATCGHRVELSEACATFYPFSNTCPAMSLHSTVGL GQRGDDVTADFRLKAGQTAMFLFGRVRGEGEEPEMELLDQRFRHTAQFWKAWIAKSKYKGRWREVVQRSALTLKLLISRE HGSLIAAPTFSLPENIGGVRNWDYRYTWLRDATFTLYALIRLGFIDETEAFIGWLKGRLSDDAQRGPLQVMYGIDGRQEL EEFSLDQFCGYENSRPVRIGNAAYQQLQLDIYGEMMDSIYLANKYGKPISHAGWREVQRLLDWLRNNWRRPDEGIWEVRG GPREFLHSRVMCWVAFDRALRLAHKRSLSGPLEVWQQTRDEIRDDIFTNFWNDELKSFVQAKGTKDLDAAALLMPMMRFI SPVDPMWLSTMKAIEDHLVEDTLVRRYEVERTQVDGLPGTEGSFTACSFWYVECLARAGELERAQLLFEKLLGYANHLGL YSEELGADGRHLGNFPQAFTHLALISAATYLDRALSGPNDATWR
Specific function: Unknown
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69100; Mature: 68969
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFEPIENYGVIGNMQSIALVGMNGSVDFLCYPNFDSPTIFAALLDDRKGGCFKISPQLT CCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEEEHHCCCCCEEEECCCHH NARVRQMYLPDTNILITRFLADEGVAELTDYMPIDSQGGEPNEIVRKVAVIRGDVRFQMC CCHHHEEECCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEE CEPRFSYATCGHRVELSEACATFYPFSNTCPAMSLHSTVGLGQRGDDVTADFRLKAGQTA CCCCCCHHHCCCCEEHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCCEE MFLFGRVRGEGEEPEMELLDQRFRHTAQFWKAWIAKSKYKGRWREVVQRSALTLKLLISR EEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEEEC EHGSLIAAPTFSLPENIGGVRNWDYRYTWLRDATFTLYALIRLGFIDETEAFIGWLKGRL CCCCEEEECCCCCCHHCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHC SDDAQRGPLQVMYGIDGRQELEEFSLDQFCGYENSRPVRIGNAAYQQLQLDIYGEMMDSI CCCCCCCCEEEEECCCCHHHHHHHCHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHH YLANKYGKPISHAGWREVQRLLDWLRNNWRRPDEGIWEVRGGPREFLHSRVMCWVAFDRA HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHH LRLAHKRSLSGPLEVWQQTRDEIRDDIFTNFWNDELKSFVQAKGTKDLDAAALLMPMMRF HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ISPVDPMWLSTMKAIEDHLVEDTLVRRYEVERTQVDGLPGTEGSFTACSFWYVECLARAG HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC ELERAQLLFEKLLGYANHLGLYSEELGADGRHLGNFPQAFTHLALISAATYLDRALSGPN CHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC DATWR CCCCC >Mature Secondary Structure PFEPIENYGVIGNMQSIALVGMNGSVDFLCYPNFDSPTIFAALLDDRKGGCFKISPQLT CCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEEEHHCCCCCEEEECCCHH NARVRQMYLPDTNILITRFLADEGVAELTDYMPIDSQGGEPNEIVRKVAVIRGDVRFQMC CCHHHEEECCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEE CEPRFSYATCGHRVELSEACATFYPFSNTCPAMSLHSTVGLGQRGDDVTADFRLKAGQTA CCCCCCHHHCCCCEEHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEECCCCEE MFLFGRVRGEGEEPEMELLDQRFRHTAQFWKAWIAKSKYKGRWREVVQRSALTLKLLISR EEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEEEC EHGSLIAAPTFSLPENIGGVRNWDYRYTWLRDATFTLYALIRLGFIDETEAFIGWLKGRL CCCCEEEECCCCCCHHCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHC SDDAQRGPLQVMYGIDGRQELEEFSLDQFCGYENSRPVRIGNAAYQQLQLDIYGEMMDSI CCCCCCCCEEEEECCCCHHHHHHHCHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHH YLANKYGKPISHAGWREVQRLLDWLRNNWRRPDEGIWEVRGGPREFLHSRVMCWVAFDRA HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHH LRLAHKRSLSGPLEVWQQTRDEIRDDIFTNFWNDELKSFVQAKGTKDLDAAALLMPMMRF HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ISPVDPMWLSTMKAIEDHLVEDTLVRRYEVERTQVDGLPGTEGSFTACSFWYVECLARAG HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC ELERAQLLFEKLLGYANHLGLYSEELGADGRHLGNFPQAFTHLALISAATYLDRALSGPN CHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC DATWR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA