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The map label for this gene is 116621220

Identifier: 116621220

GI number: 116621220

Start: 2682650

End: 2683708

Strand: Reverse

Name: 116621220

Synonym: Acid_2101

Alternate gene names: NA

Gene position: 2683708-2682650 (Counterclockwise)

Preceding gene: 116621221

Following gene: 116621215

Centisome position: 26.93

GC content: 57.88

Gene sequence:

>1059_bases
ATGAGGATTAGGCGTTCCATCCACTTCATTGTTCTGCTTTTGGCTCTTTCCCTGATTTCCGCGTACGGTCAGCGGGAAGA
GTCGAAACCTGCGGCGTCCGCCATGATAGCCGCCCGGAAGCCGGTATTCGCCGGCGCTTGCAAAGCTTGCCCATGGGGCA
TTCTGGCAAAAGTTACGTCCGACGCACTCAGCTTTTATGGATACCAGACCACCATCTGCTGGGTCTGCTGGTCGAGCTTC
GGGCCGCGCGAGATGGGAGACAAAACCAAGCCGGTGATCCCTCCGGGCGCGCTCGATAATCCGGAGTACGTCGAACCACC
TCCGGATGCCGTGCCGGACATCAGCGCCACCAGCGAATCCAATTTGATCGATGCGTGGAACGGTACCGGTCCCTACTTGA
CCGATGGCAAGCAGCGCCGCAACTACCGGGTGATTGCAGTGATCCGGACTTCGACGTATATGCTTGCCGCGGCGAGCAGG
AAATCCGGAATCACAAATCTGAGACAGATCAAAGACCGTCAGGAGCCAACGTGGGTTGTGGGAAATAACCAGATCATTTT
CGATCACTACGGCATTAAAGTGGAGGATCTGAAAGCCAAGGGCGGCGGCATCATGCCGGCCAACGCGACTCGGGAGAAAC
GAGCTTCGGGCGATGTGTTCATCGGTACCGGCCTTCTGGCAAACACGCCGGAGCAGCGCTCGTGGTATGAGGCCAGCCAA
TTGAACGATCTTGTGTTTCTCGAGTTCGAAGAGCCGCTCATCGCCAGGCTGGCCCAGGTGCCCGGGTACCAGCGGGCCAC
CGTTCCGCTGGCATTGTTCCGCGGGGTAACCCGCCCCATTCCCACCGTAATACGCCCGAATCACTTCATCTATGTACGCG
ACGAAGCGCCGGATTCTTTTGCTTACGATGTGGCCAAGGCTCTCGATGAACACCGCGATCTATTCCAGGTTCAACTTGAA
CCTTGGTATTACGACCCGCAGACCGTGGCACTGAGCAGGGTGATCCCGATGCATCCCGGGGCGATGAAGTATTACCGGGA
GCGCGGCTACGTCAAGTAG

Upstream 100 bases:

>100_bases
GGCATTTCTTCTGGGAAGACCCGGGCCTGCCGGAGTCGCGCGAGGCGATGACCGCGCTGGCAAACTTCTTCAATCTCCAT
CTGAAATAGCATTGGATCGT

Downstream 100 bases:

>100_bases
GTCGCAGCCGCTTCATCATTCCGCCCGGATCTCGAGAACCGCGACCGTGTAAGGGTCCAGGTCCACGGTGAGGTCCTTCG
CGTACGCCACCGCTCGGCTC

Product: TRAP-type transporter periplasmic component-like protein

Products: NA

Alternate protein names: Trap Transporter Solute Receptor Taxi Family Protein; TRAP Transporter Solute Receptor TAXI Family Protein

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MRIRRSIHFIVLLLALSLISAYGQREESKPAASAMIAARKPVFAGACKACPWGILAKVTSDALSFYGYQTTICWVCWSSF
GPREMGDKTKPVIPPGALDNPEYVEPPPDAVPDISATSESNLIDAWNGTGPYLTDGKQRRNYRVIAVIRTSTYMLAAASR
KSGITNLRQIKDRQEPTWVVGNNQIIFDHYGIKVEDLKAKGGGIMPANATREKRASGDVFIGTGLLANTPEQRSWYEASQ
LNDLVFLEFEEPLIARLAQVPGYQRATVPLALFRGVTRPIPTVIRPNHFIYVRDEAPDSFAYDVAKALDEHRDLFQVQLE
PWYYDPQTVALSRVIPMHPGAMKYYRERGYVK

Sequences:

>Translated_352_residues
MRIRRSIHFIVLLLALSLISAYGQREESKPAASAMIAARKPVFAGACKACPWGILAKVTSDALSFYGYQTTICWVCWSSF
GPREMGDKTKPVIPPGALDNPEYVEPPPDAVPDISATSESNLIDAWNGTGPYLTDGKQRRNYRVIAVIRTSTYMLAAASR
KSGITNLRQIKDRQEPTWVVGNNQIIFDHYGIKVEDLKAKGGGIMPANATREKRASGDVFIGTGLLANTPEQRSWYEASQ
LNDLVFLEFEEPLIARLAQVPGYQRATVPLALFRGVTRPIPTVIRPNHFIYVRDEAPDSFAYDVAKALDEHRDLFQVQLE
PWYYDPQTVALSRVIPMHPGAMKYYRERGYVK
>Mature_352_residues
MRIRRSIHFIVLLLALSLISAYGQREESKPAASAMIAARKPVFAGACKACPWGILAKVTSDALSFYGYQTTICWVCWSSF
GPREMGDKTKPVIPPGALDNPEYVEPPPDAVPDISATSESNLIDAWNGTGPYLTDGKQRRNYRVIAVIRTSTYMLAAASR
KSGITNLRQIKDRQEPTWVVGNNQIIFDHYGIKVEDLKAKGGGIMPANATREKRASGDVFIGTGLLANTPEQRSWYEASQ
LNDLVFLEFEEPLIARLAQVPGYQRATVPLALFRGVTRPIPTVIRPNHFIYVRDEAPDSFAYDVAKALDEHRDLFQVQLE
PWYYDPQTVALSRVIPMHPGAMKYYRERGYVK

Specific function: Unknown

COG id: COG2358

COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39399; Mature: 39399

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRRSIHFIVLLLALSLISAYGQREESKPAASAMIAARKPVFAGACKACPWGILAKVTS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHH
DALSFYGYQTTICWVCWSSFGPREMGDKTKPVIPPGALDNPEYVEPPPDAVPDISATSES
HHHHHCCHHHEEEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NLIDAWNGTGPYLTDGKQRRNYRVIAVIRTSTYMLAAASRKSGITNLRQIKDRQEPTWVV
CEEECCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEECHHHCCCHHHHHHHHCCCCEEEE
GNNQIIFDHYGIKVEDLKAKGGGIMPANATREKRASGDVFIGTGLLANTPEQRSWYEASQ
CCCEEEEEECCEEEEEEECCCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCHHHHHHHHH
LNDLVFLEFEEPLIARLAQVPGYQRATVPLALFRGVTRPIPTVIRPNHFIYVRDEAPDSF
CCCEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEECCCEEEEEECCCCCHH
AYDVAKALDEHRDLFQVQLEPWYYDPQTVALSRVIPMHPGAMKYYRERGYVK
HHHHHHHHHHHCCEEEEEECCEEECCHHHHHHHCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MRIRRSIHFIVLLLALSLISAYGQREESKPAASAMIAARKPVFAGACKACPWGILAKVTS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHH
DALSFYGYQTTICWVCWSSFGPREMGDKTKPVIPPGALDNPEYVEPPPDAVPDISATSES
HHHHHCCHHHEEEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NLIDAWNGTGPYLTDGKQRRNYRVIAVIRTSTYMLAAASRKSGITNLRQIKDRQEPTWVV
CEEECCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEECHHHCCCHHHHHHHHCCCCEEEE
GNNQIIFDHYGIKVEDLKAKGGGIMPANATREKRASGDVFIGTGLLANTPEQRSWYEASQ
CCCEEEEEECCEEEEEEECCCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCHHHHHHHHH
LNDLVFLEFEEPLIARLAQVPGYQRATVPLALFRGVTRPIPTVIRPNHFIYVRDEAPDSF
CCCEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEECCCEEEEEECCCCCHH
AYDVAKALDEHRDLFQVQLEPWYYDPQTVALSRVIPMHPGAMKYYRERGYVK
HHHHHHHHHHHCCEEEEEECCEEECCHHHHHHHCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA