| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is xsa [H]
Identifier: 116621219
GI number: 116621219
Start: 2680652
End: 2682634
Strand: Direct
Name: xsa [H]
Synonym: Acid_2100
Alternate gene names: 116621219
Gene position: 2680652-2682634 (Clockwise)
Preceding gene: 116621218
Following gene: 116621224
Centisome position: 26.9
GC content: 63.84
Gene sequence:
>1983_bases ATGAACAGACGCCACTTTCTCATGAGTTCGATAGCGGCAAGCTCCGCCGTTGCTCCGTCCTTCGCCGTGTCGAGCTCGCC CGGATCGAGCGACGCCGATGCCGCGGGCGTGACGAGAGCAGCCGTCCTGCTCGTCGATACGGACCGGGTCACGACTGCCA TCGACCGGCGGATCTACGGCCATTTTCTGGAGCACATCAATCACTCGGTAGTCGATGGGCTGTTCGCAGAGCAGATTCGC GGCTGCGGGTTTGAGGGAGAGGACTTCAAAACCTACTGGGAGCCGTTCTCGGAGAACGGCAGCGCCGAATGCGTGGACGT GGAGTTCCGGAACGGGAAGAAGAGCGTGCGGCTGCAAGTGGAGGGGGGCCGCGCCGGGATCCGGCAGGGCCGCCTTTTCA TGGACGCGGGCCACACCTACGACGGCTCGCTCTGGGTCAAACACGAGGCAGGCTCGCCACAGTTGACGCTTCGCGTTATA AGCTCCAAGGGCGATCCGATTGCGTCGGCGCCGCTGGCGGTGACGGGCTCCGGCTGGCAGGAGGTCCACTATTCCTTTTC CAGCGCCGTGCGGGAAACGCAAGCCTCGGTGGAAATCGCGGCGGCGGGAAGAGGAACGCTGCTGCTCGATTTCGTCTCCA TGATGCGCGCGGACGTCCGTCGCGACGGCATGCTGCGCCCCGATCTGTTGCAAGCCGTACGCGATCTTGCTCCACCGTTC ATTCGGTGGCCGGGGGGCTCCTTCGCTTCCACGTACAAGTGGAAGGACGGCATCGGACGGCACGTCGCACGCAGATACCA CCCCAATACGTTCTGGGGCGGCTACTCGGACTACTACGGCTTCGGGACGGAGGAGTTTCTGGGGCTCTGCCGGAAGCTCA ACTCCGAGCCGCTCATTGTACTGGCGGCGCCCGGTACCGGCTCCGAGCAGGTTCAGTACGCGATGGACTGGGTCCACTAC CTGAACGATCCGCCCACGACCGAAATGGGGCGGCTGCGTGCGGCCAATGGGCATCCCGAGCCGTACGGCGTCCGCTATTT CCAGATCGACAACGAGCCTATGAACAACGGGTTCACGCCGGAGAAGTACGCCGAAATCGTCAACGTCTACGGCAGCCGGT TGCGGGCGATCGCTCCTCAGGCGCGAATCGTGGCGTGCGGACAGAAGCGGTCCAACGACATGGTTTGGAGTCAGAAGGTC ATCGACCTTGCCGGAAAGAACTTCGACGTACTCGGAGTGCACAACTACGAGTACGAACCCGGGAGCTTCGAAACCGGGCT GCGGCGCATCCGCGACTCCCTCTCGAAGCTGCGGGACTATGTACGCGCATCGGCGCACCCGCGGATCGAGATCGGCGTGC TGGAGTGGAACCTCTCACGCACGTACGATTGGCGAGCCGGACTCCATGCGGCAGGCAGCCTGATGCTTTACGAGGAACTC AGCCCCAGTCTGACGATGAGCTGTCCGGCCTTGCTGATGCGGAACACTACGGACGATCCGACCTGGACGTCATTCATCTA CCACGACCACGTCTCCTGGTTTCCGGGTTGCGCGTATCCGGTGGAGAAGCTCTTTCGCGAGCACTACGCGGAAAGGCGCC TCGCGTCCACGAGCGGCGCCTTCCGGGACGTGCCAGACCGGAGGCATTTCTTTGACGAGATCTCGACCATGAGGCCGGAC GACTGGATGCCGGGCACGGTCGATGCCATTGCAACGGGGAGCGCCGACGGCCGCCGGATCGTGATCAAGGCAGTCAACTA TGGAGCGGAGCGTACCGCCCTGCTGATGCGACTGCAGGGCGCCACTGTTCCCGGGAAGGCGGTGGCGACGCTGCACACGA TCAGCGCCGGGCTGACGGATTCCGCGTCGCTCGACCGCCCGAATGCGATTGCTCCGGTGAGCCGAGCGGTGGCGTACGCG AAGGACCTCACCGTGGACCTGGACCCTTACACGGTCGCGGTTCTCGAGATCCGGGCGGAATGA
Upstream 100 bases:
>100_bases CGGATGAGGTGCGGTTCACACCAGTCGCCGGCGATCGGAAATAACATAGAGGGGTCGTGTCGTCCTGAGTCACATCAGAG GACGATTATGGAGACTGTCG
Downstream 100 bases:
>100_bases TGAAGCGGCTGCGACCTACTTGACGTAGCCGCGCTCCCGGTAATACTTCATCGCCCCGGGATGCATCGGGATCACCCTGC TCAGTGCCACGGTCTGCGGG
Product: alpha-N-arabinofuranosidase
Products: NA
Alternate protein names: Arabinosidase 2 [H]
Number of amino acids: Translated: 660; Mature: 660
Protein sequence:
>660_residues MNRRHFLMSSIAASSAVAPSFAVSSSPGSSDADAAGVTRAAVLLVDTDRVTTAIDRRIYGHFLEHINHSVVDGLFAEQIR GCGFEGEDFKTYWEPFSENGSAECVDVEFRNGKKSVRLQVEGGRAGIRQGRLFMDAGHTYDGSLWVKHEAGSPQLTLRVI SSKGDPIASAPLAVTGSGWQEVHYSFSSAVRETQASVEIAAAGRGTLLLDFVSMMRADVRRDGMLRPDLLQAVRDLAPPF IRWPGGSFASTYKWKDGIGRHVARRYHPNTFWGGYSDYYGFGTEEFLGLCRKLNSEPLIVLAAPGTGSEQVQYAMDWVHY LNDPPTTEMGRLRAANGHPEPYGVRYFQIDNEPMNNGFTPEKYAEIVNVYGSRLRAIAPQARIVACGQKRSNDMVWSQKV IDLAGKNFDVLGVHNYEYEPGSFETGLRRIRDSLSKLRDYVRASAHPRIEIGVLEWNLSRTYDWRAGLHAAGSLMLYEEL SPSLTMSCPALLMRNTTDDPTWTSFIYHDHVSWFPGCAYPVEKLFREHYAERRLASTSGAFRDVPDRRHFFDEISTMRPD DWMPGTVDAIATGSADGRRIVIKAVNYGAERTALLMRLQGATVPGKAVATLHTISAGLTDSASLDRPNAIAPVSRAVAYA KDLTVDLDPYTVAVLEIRAE
Sequences:
>Translated_660_residues MNRRHFLMSSIAASSAVAPSFAVSSSPGSSDADAAGVTRAAVLLVDTDRVTTAIDRRIYGHFLEHINHSVVDGLFAEQIR GCGFEGEDFKTYWEPFSENGSAECVDVEFRNGKKSVRLQVEGGRAGIRQGRLFMDAGHTYDGSLWVKHEAGSPQLTLRVI SSKGDPIASAPLAVTGSGWQEVHYSFSSAVRETQASVEIAAAGRGTLLLDFVSMMRADVRRDGMLRPDLLQAVRDLAPPF IRWPGGSFASTYKWKDGIGRHVARRYHPNTFWGGYSDYYGFGTEEFLGLCRKLNSEPLIVLAAPGTGSEQVQYAMDWVHY LNDPPTTEMGRLRAANGHPEPYGVRYFQIDNEPMNNGFTPEKYAEIVNVYGSRLRAIAPQARIVACGQKRSNDMVWSQKV IDLAGKNFDVLGVHNYEYEPGSFETGLRRIRDSLSKLRDYVRASAHPRIEIGVLEWNLSRTYDWRAGLHAAGSLMLYEEL SPSLTMSCPALLMRNTTDDPTWTSFIYHDHVSWFPGCAYPVEKLFREHYAERRLASTSGAFRDVPDRRHFFDEISTMRPD DWMPGTVDAIATGSADGRRIVIKAVNYGAERTALLMRLQGATVPGKAVATLHTISAGLTDSASLDRPNAIAPVSRAVAYA KDLTVDLDPYTVAVLEIRAE >Mature_660_residues MNRRHFLMSSIAASSAVAPSFAVSSSPGSSDADAAGVTRAAVLLVDTDRVTTAIDRRIYGHFLEHINHSVVDGLFAEQIR GCGFEGEDFKTYWEPFSENGSAECVDVEFRNGKKSVRLQVEGGRAGIRQGRLFMDAGHTYDGSLWVKHEAGSPQLTLRVI SSKGDPIASAPLAVTGSGWQEVHYSFSSAVRETQASVEIAAAGRGTLLLDFVSMMRADVRRDGMLRPDLLQAVRDLAPPF IRWPGGSFASTYKWKDGIGRHVARRYHPNTFWGGYSDYYGFGTEEFLGLCRKLNSEPLIVLAAPGTGSEQVQYAMDWVHY LNDPPTTEMGRLRAANGHPEPYGVRYFQIDNEPMNNGFTPEKYAEIVNVYGSRLRAIAPQARIVACGQKRSNDMVWSQKV IDLAGKNFDVLGVHNYEYEPGSFETGLRRIRDSLSKLRDYVRASAHPRIEIGVLEWNLSRTYDWRAGLHAAGSLMLYEEL SPSLTMSCPALLMRNTTDDPTWTSFIYHDHVSWFPGCAYPVEKLFREHYAERRLASTSGAFRDVPDRRHFFDEISTMRPD DWMPGTVDAIATGSADGRRIVIKAVNYGAERTALLMRLQGATVPGKAVATLHTISAGLTDSASLDRPNAIAPVSRAVAYA KDLTVDLDPYTVAVLEIRAE
Specific function: Unknown
COG id: COG3534
COG function: function code G; Alpha-L-arabinofuranosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 51 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010720 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF06964 Alpha-L-AF_C [H]
EC number: =3.2.1.55 [H]
Molecular weight: Translated: 73083; Mature: 73083
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRHFLMSSIAASSAVAPSFAVSSSPGSSDADAAGVTRAAVLLVDTDRVTTAIDRRIYG CCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHH HFLEHINHSVVDGLFAEQIRGCGFEGEDFKTYWEPFSENGSAECVDVEFRNGKKSVRLQV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCEEEEEEE EGGRAGIRQGRLFMDAGHTYDGSLWVKHEAGSPQLTLRVISSKGDPIASAPLAVTGSGWQ CCCCCCHHCCEEEEECCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEECCCHH EVHYSFSSAVRETQASVEIAAAGRGTLLLDFVSMMRADVRRDGMLRPDLLQAVRDLAPPF HHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCE IRWPGGSFASTYKWKDGIGRHVARRYHPNTFWGGYSDYYGFGTEEFLGLCRKLNSEPLIV EECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCEEE LAAPGTGSEQVQYAMDWVHYLNDPPTTEMGRLRAANGHPEPYGVRYFQIDNEPMNNGFTP EECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCH EKYAEIVNVYGSRLRAIAPQARIVACGQKRSNDMVWSQKVIDLAGKNFDVLGVHNYEYEP HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCC GSFETGLRRIRDSLSKLRDYVRASAHPRIEIGVLEWNLSRTYDWRAGLHAAGSLMLYEEL CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHCCHHHCCCEEEEECC SPSLTMSCPALLMRNTTDDPTWTSFIYHDHVSWFPGCAYPVEKLFREHYAERRLASTSGA CCCCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC FRDVPDRRHFFDEISTMRPDDWMPGTVDAIATGSADGRRIVIKAVNYGAERTALLMRLQG CCCCCHHHHHHHHHHCCCCCCCCCCCHHHEECCCCCCCEEEEEEECCCCHHHEEEEEECC ATVPGKAVATLHTISAGLTDSASLDRPNAIAPVSRAVAYAKDLTVDLDPYTVAVLEIRAE CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCEEECCCEEEEEEEEECC >Mature Secondary Structure MNRRHFLMSSIAASSAVAPSFAVSSSPGSSDADAAGVTRAAVLLVDTDRVTTAIDRRIYG CCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHH HFLEHINHSVVDGLFAEQIRGCGFEGEDFKTYWEPFSENGSAECVDVEFRNGKKSVRLQV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCEEEEEEE EGGRAGIRQGRLFMDAGHTYDGSLWVKHEAGSPQLTLRVISSKGDPIASAPLAVTGSGWQ CCCCCCHHCCEEEEECCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEECCCHH EVHYSFSSAVRETQASVEIAAAGRGTLLLDFVSMMRADVRRDGMLRPDLLQAVRDLAPPF HHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCE IRWPGGSFASTYKWKDGIGRHVARRYHPNTFWGGYSDYYGFGTEEFLGLCRKLNSEPLIV EECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCEEE LAAPGTGSEQVQYAMDWVHYLNDPPTTEMGRLRAANGHPEPYGVRYFQIDNEPMNNGFTP EECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCH EKYAEIVNVYGSRLRAIAPQARIVACGQKRSNDMVWSQKVIDLAGKNFDVLGVHNYEYEP HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCC GSFETGLRRIRDSLSKLRDYVRASAHPRIEIGVLEWNLSRTYDWRAGLHAAGSLMLYEEL CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHCCHHHCCCEEEEECC SPSLTMSCPALLMRNTTDDPTWTSFIYHDHVSWFPGCAYPVEKLFREHYAERRLASTSGA CCCCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC FRDVPDRRHFFDEISTMRPDDWMPGTVDAIATGSADGRRIVIKAVNYGAERTALLMRLQG CCCCCHHHHHHHHHHCCCCCCCCCCCHHHEECCCCCCCEEEEEEECCCCHHHEEEEEECC ATVPGKAVATLHTISAGLTDSASLDRPNAIAPVSRAVAYAKDLTVDLDPYTVAVLEIRAE CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCEEECCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969504; 9384377 [H]