| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621217
Identifier: 116621217
GI number: 116621217
Start: 2678719
End: 2680035
Strand: Direct
Name: 116621217
Synonym: Acid_2098
Alternate gene names: NA
Gene position: 2678719-2680035 (Clockwise)
Preceding gene: 116621216
Following gene: 116621218
Centisome position: 26.88
GC content: 62.87
Gene sequence:
>1317_bases ATGTGGAATACCAACGGACCTACTCGATCGCCCGATCGCGCCATCTCACGCCGCACGATGCTGCGCGGCGTTGGCGTCGG ACTGGCGCTGCCGCTTCTGAACGCGATGTCCCCGGCGACGGCCCGCGCACAGTCCGCAACCGCGCCGCGCCGCATGCTCG CGATCTGCAATAACCTGGGTCTGCTGCCGGGCGAGTTCTTTCCCGCCGATGCGGGGGCCGGCTATACGCCCTCGAACTAC CTCAAAGTTCTTCAGGACTACCGCGAGGACTTCACCGTGTTCTCCGGCGTCTCGCACCCGAACGTGGATGGCGGGCACCC GGCCGACATCAGTTTTCTGACGGCAGCGCCGCACCCGGCGAGCAGTTCATTCCGCAACACCATCTCGCTCGATCAGTACA TCGCCGAACGCATCGGCAATCAGACGCGCTTTCCCTCCCTCACGCTGGCGGTCAACACGGGGGCGCGCTCGCTCTCCTGG ACGGGCAACGGCGTCGGCATACCGCCGGAACAAAGCGCCGCCGCGGTCTTCCGGCAGATGTTCATTCAGGGCAGCCCCAA GGAGGTCGAAGCAAAACTCGCGGAGCTCGATAGCGGCCGATCCATCCTCGACGCGGTGGCCAGCCAGGCCCGCGACCTGG AGGGCAGGGTCGGCGCCGCCGACCGCGCTCGTCTTGACCAGTACTTCACCAGCGTCCGAGACCTGGAGAACCGCTTACAG GAATCCAAAGGATGGGAGCGGAAACCCAAACCGGTGGTTAAGGAACCGGAACCGCAGGACCCCGCCAGCCCCGTGCAGTA TATGGCAAAGGTCGCCAACATGTACAGCCTGGTGCGACTGGCTTTTGAAACCGATTCGACGCGCGCGGTGACCCTGATGC TGGACAGCGTGAGCACTCCCGTGGTGGAGATTAGAGGGGCCATCATCAGCGACGGATACCACAATCTTTCACATCACGGG AAATCGGAGGCAAAGCTGGCCCAGCTCCGCGTCATCGATTCCTGGCACATGCGTCTGCTCGCGGAGCTTTTCAAGGGATT GAAAGCCGTCCAGGAAAACGGCGAAACGCTGCTGGACCGCTCCATGGTTCTCTACGGCTCAAACCTGGGCGACGCTAATG CCCACTCCACGTCAAACATGCCGGTGCTGCTGGCAGGCGGAGGCTTCCGGCACGCGGGCCACCTCGCCTTCGATCGCAAC CAGAATTATCCGCTTCCCAACCTGTTCGTTTCCATGCTCCAGCGCATGGGGATCGAGGCAGGCAAGTTTGCTTCTTCCAC GGGAACCATGTCGGGCCTCGAGATGACAAAAGCATGA
Upstream 100 bases:
>100_bases TCCTCGACAGAGCCCGCGGCTCAGGCTACGGAATCCGCGATATCGTTCTTGGGATCGTTGAGAGCGATCTCTTCCGCAAC AAATGATGGAGAGAGCCACG
Downstream 100 bases:
>100_bases GTCGCGCCACGGCCACACGATTCCTGTTGCTGCTGGGCGCGATTGCTTACGCGTGGTGCGCCGAAGAAGTTATCGTGGAC TTCGAAAACGCCGTCCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein; Tat Pathway Signal Sequence Domain-Containing Protein; Signal Peptide Prediction
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MWNTNGPTRSPDRAISRRTMLRGVGVGLALPLLNAMSPATARAQSATAPRRMLAICNNLGLLPGEFFPADAGAGYTPSNY LKVLQDYREDFTVFSGVSHPNVDGGHPADISFLTAAPHPASSSFRNTISLDQYIAERIGNQTRFPSLTLAVNTGARSLSW TGNGVGIPPEQSAAAVFRQMFIQGSPKEVEAKLAELDSGRSILDAVASQARDLEGRVGAADRARLDQYFTSVRDLENRLQ ESKGWERKPKPVVKEPEPQDPASPVQYMAKVANMYSLVRLAFETDSTRAVTLMLDSVSTPVVEIRGAIISDGYHNLSHHG KSEAKLAQLRVIDSWHMRLLAELFKGLKAVQENGETLLDRSMVLYGSNLGDANAHSTSNMPVLLAGGGFRHAGHLAFDRN QNYPLPNLFVSMLQRMGIEAGKFASSTGTMSGLEMTKA
Sequences:
>Translated_438_residues MWNTNGPTRSPDRAISRRTMLRGVGVGLALPLLNAMSPATARAQSATAPRRMLAICNNLGLLPGEFFPADAGAGYTPSNY LKVLQDYREDFTVFSGVSHPNVDGGHPADISFLTAAPHPASSSFRNTISLDQYIAERIGNQTRFPSLTLAVNTGARSLSW TGNGVGIPPEQSAAAVFRQMFIQGSPKEVEAKLAELDSGRSILDAVASQARDLEGRVGAADRARLDQYFTSVRDLENRLQ ESKGWERKPKPVVKEPEPQDPASPVQYMAKVANMYSLVRLAFETDSTRAVTLMLDSVSTPVVEIRGAIISDGYHNLSHHG KSEAKLAQLRVIDSWHMRLLAELFKGLKAVQENGETLLDRSMVLYGSNLGDANAHSTSNMPVLLAGGGFRHAGHLAFDRN QNYPLPNLFVSMLQRMGIEAGKFASSTGTMSGLEMTKA >Mature_438_residues MWNTNGPTRSPDRAISRRTMLRGVGVGLALPLLNAMSPATARAQSATAPRRMLAICNNLGLLPGEFFPADAGAGYTPSNY LKVLQDYREDFTVFSGVSHPNVDGGHPADISFLTAAPHPASSSFRNTISLDQYIAERIGNQTRFPSLTLAVNTGARSLSW TGNGVGIPPEQSAAAVFRQMFIQGSPKEVEAKLAELDSGRSILDAVASQARDLEGRVGAADRARLDQYFTSVRDLENRLQ ESKGWERKPKPVVKEPEPQDPASPVQYMAKVANMYSLVRLAFETDSTRAVTLMLDSVSTPVVEIRGAIISDGYHNLSHHG KSEAKLAQLRVIDSWHMRLLAELFKGLKAVQENGETLLDRSMVLYGSNLGDANAHSTSNMPVLLAGGGFRHAGHLAFDRN QNYPLPNLFVSMLQRMGIEAGKFASSTGTMSGLEMTKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47468; Mature: 47468
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWNTNGPTRSPDRAISRRTMLRGVGVGLALPLLNAMSPATARAQSATAPRRMLAICNNLG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCC LLPGEFFPADAGAGYTPSNYLKVLQDYREDFTVFSGVSHPNVDGGHPADISFLTAAPHPA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCC SSSFRNTISLDQYIAERIGNQTRFPSLTLAVNTGARSLSWTGNGVGIPPEQSAAAVFRQM CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHH FIQGSPKEVEAKLAELDSGRSILDAVASQARDLEGRVGAADRARLDQYFTSVRDLENRLQ HHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ESKGWERKPKPVVKEPEPQDPASPVQYMAKVANMYSLVRLAFETDSTRAVTLMLDSVSTP HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC VVEIRGAIISDGYHNLSHHGKSEAKLAQLRVIDSWHMRLLAELFKGLKAVQENGETLLDR HHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC SMVLYGSNLGDANAHSTSNMPVLLAGGGFRHAGHLAFDRNQNYPLPNLFVSMLQRMGIEA CCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCC GKFASSTGTMSGLEMTKA CCCCCCCCCCCCCHHCCC >Mature Secondary Structure MWNTNGPTRSPDRAISRRTMLRGVGVGLALPLLNAMSPATARAQSATAPRRMLAICNNLG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCC LLPGEFFPADAGAGYTPSNYLKVLQDYREDFTVFSGVSHPNVDGGHPADISFLTAAPHPA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCC SSSFRNTISLDQYIAERIGNQTRFPSLTLAVNTGARSLSWTGNGVGIPPEQSAAAVFRQM CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHH FIQGSPKEVEAKLAELDSGRSILDAVASQARDLEGRVGAADRARLDQYFTSVRDLENRLQ HHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ESKGWERKPKPVVKEPEPQDPASPVQYMAKVANMYSLVRLAFETDSTRAVTLMLDSVSTP HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC VVEIRGAIISDGYHNLSHHGKSEAKLAQLRVIDSWHMRLLAELFKGLKAVQENGETLLDR HHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC SMVLYGSNLGDANAHSTSNMPVLLAGGGFRHAGHLAFDRNQNYPLPNLFVSMLQRMGIEA CCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCC GKFASSTGTMSGLEMTKA CCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA