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The map label for this gene is 116621215

Identifier: 116621215

GI number: 116621215

Start: 2674598

End: 2675764

Strand: Reverse

Name: 116621215

Synonym: Acid_2096

Alternate gene names: NA

Gene position: 2675764-2674598 (Counterclockwise)

Preceding gene: 116621220

Following gene: 116621214

Centisome position: 26.85

GC content: 63.41

Gene sequence:

>1167_bases
GTGAAGGGGCGCGTCTCAAGAGGCGGCTGTTTTGTCATGGCTTGGATGCCCTGTCTGCTGGCGCAGGTCGGCGGCAACAC
CGCGCAAACGGTCGCCGCCCTCGAACAACAAGTACAGCGTCAGCTTCAGGACCAAAAGCCGCAGCTCGCCATTCCGCTGC
TCCGGCAGGTGGTGTCCCTCGAGCCCGGCAACGTCAATGCCCAAGCCAATCTCGGCGTCCTCCTTTTCTTCCAGGGCAGC
TACCGGGACGCCATTCCCCCGATGCGAGCCGCTCTCCAATTGCATCCCGAGCTCTCGAAGATACAGGCGCTCCTCGGCAT
GGCCGAGAAGCGCACCGGCAGCCCCCAGCAGGCCCAGCAGGACCTGGAGCGTGCCTTTCCCAATCTCGACGATAAGAAGT
TCCAGGTCGAGGCCGGCCTGGAACTCATCGAACTGCACGTCGCCTCGGCCCAGCTCGATCGGGCCCTCGCCCTCGCCGCC
AGGCTACAGGAACTGGCGCCGCAGAACCCCCAGATTCTGCTTACTCAATACCAGATCTCGCGCCAGGTGATGTACCAGAG
CCTGCTCGGCATGATGATGGTCTCGCCAGATTCCGCTGAGATGCGGATGATCATGGGCGGCGAGCTCGGCCGCCAGGGCG
ATCGGGCCGCTGCCATCGCGCAATACCGCGAGGCGATCCGCCTCAATCCCAAGCTGCCCGGCGTACATTATGAATTGGCG
GAGCTGCTGCGCTCGTCCTCCGATGCCGCGTCGAATGCCCAGGCCGATGAGGAATATAGGGCCGCCATCGGCCTTAATCC
GTACGACATTCTGTCGTGGCGGCGGCTCGGTGAGATCGCCTCGGCGAAGGGCGATTTTTCCGCGGCCGAGGAGCACTACA
AGAAAGCGCTCGCCCTGCAGCCCAAGGATTCCGATGCCAAGACCGGCCTAGCCATCGTTTTCATTTCCACCAACCGGACC
ACGGGGGCCATTCACCTGCTCGAAGACGCTCTGAAGGATGACCCGGCCAATCTGGTGGCGCACTACCGTTTGAGCGGCCT
CTATCGCCGCGCCGGCCGCAGCGCCGACGCGGAGCGCGAAATGGAGAGCTTCCGCCACTACCAGGACCTGAAAGATCAGC
TCGGCAAGGTGTTCAAACAACTCGCCGCGCCCGGCAATCCCAAATGA

Upstream 100 bases:

>100_bases
CGGCAGCGGTCTCCGTGGTCAACGCGACCGCGGTTTTCCGGGGCGCCCGCTTACTCCAGCCCAAATGTCGGCTGACCCAA
TCTGGTATACAGTAGGCAAG

Downstream 100 bases:

>100_bases
AGCCTCGAGCACACGCGAACCGGCTGGTCGCCGCCGCGGCCCTCCTCATTGTTGCCATGTGCGTCCAGGCGCAGCGGCAA
AGCGCCACTCCCGATGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Family; TPR Domain Protein

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MKGRVSRGGCFVMAWMPCLLAQVGGNTAQTVAALEQQVQRQLQDQKPQLAIPLLRQVVSLEPGNVNAQANLGVLLFFQGS
YRDAIPPMRAALQLHPELSKIQALLGMAEKRTGSPQQAQQDLERAFPNLDDKKFQVEAGLELIELHVASAQLDRALALAA
RLQELAPQNPQILLTQYQISRQVMYQSLLGMMMVSPDSAEMRMIMGGELGRQGDRAAAIAQYREAIRLNPKLPGVHYELA
ELLRSSSDAASNAQADEEYRAAIGLNPYDILSWRRLGEIASAKGDFSAAEEHYKKALALQPKDSDAKTGLAIVFISTNRT
TGAIHLLEDALKDDPANLVAHYRLSGLYRRAGRSADAEREMESFRHYQDLKDQLGKVFKQLAAPGNPK

Sequences:

>Translated_388_residues
MKGRVSRGGCFVMAWMPCLLAQVGGNTAQTVAALEQQVQRQLQDQKPQLAIPLLRQVVSLEPGNVNAQANLGVLLFFQGS
YRDAIPPMRAALQLHPELSKIQALLGMAEKRTGSPQQAQQDLERAFPNLDDKKFQVEAGLELIELHVASAQLDRALALAA
RLQELAPQNPQILLTQYQISRQVMYQSLLGMMMVSPDSAEMRMIMGGELGRQGDRAAAIAQYREAIRLNPKLPGVHYELA
ELLRSSSDAASNAQADEEYRAAIGLNPYDILSWRRLGEIASAKGDFSAAEEHYKKALALQPKDSDAKTGLAIVFISTNRT
TGAIHLLEDALKDDPANLVAHYRLSGLYRRAGRSADAEREMESFRHYQDLKDQLGKVFKQLAAPGNPK
>Mature_388_residues
MKGRVSRGGCFVMAWMPCLLAQVGGNTAQTVAALEQQVQRQLQDQKPQLAIPLLRQVVSLEPGNVNAQANLGVLLFFQGS
YRDAIPPMRAALQLHPELSKIQALLGMAEKRTGSPQQAQQDLERAFPNLDDKKFQVEAGLELIELHVASAQLDRALALAA
RLQELAPQNPQILLTQYQISRQVMYQSLLGMMMVSPDSAEMRMIMGGELGRQGDRAAAIAQYREAIRLNPKLPGVHYELA
ELLRSSSDAASNAQADEEYRAAIGLNPYDILSWRRLGEIASAKGDFSAAEEHYKKALALQPKDSDAKTGLAIVFISTNRT
TGAIHLLEDALKDDPANLVAHYRLSGLYRRAGRSADAEREMESFRHYQDLKDQLGKVFKQLAAPGNPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=379, Percent_Identity=23.2189973614776, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI32307148, Length=379, Percent_Identity=23.2189973614776, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI118766330, Length=167, Percent_Identity=28.1437125748503, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI118766328, Length=165, Percent_Identity=28.4848484848485, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42750; Mature: 42750

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGRVSRGGCFVMAWMPCLLAQVGGNTAQTVAALEQQVQRQLQDQKPQLAIPLLRQVVSL
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
EPGNVNAQANLGVLLFFQGSYRDAIPPMRAALQLHPELSKIQALLGMAEKRTGSPQQAQQ
CCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHH
DLERAFPNLDDKKFQVEAGLELIELHVASAQLDRALALAARLQELAPQNPQILLTQYQIS
HHHHHCCCCCCCCEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHH
RQVMYQSLLGMMMVSPDSAEMRMIMGGELGRQGDRAAAIAQYREAIRLNPKLPGVHYELA
HHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHH
ELLRSSSDAASNAQADEEYRAAIGLNPYDILSWRRLGEIASAKGDFSAAEEHYKKALALQ
HHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
PKDSDAKTGLAIVFISTNRTTGAIHLLEDALKDDPANLVAHYRLSGLYRRAGRSADAERE
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
MESFRHYQDLKDQLGKVFKQLAAPGNPK
HHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKGRVSRGGCFVMAWMPCLLAQVGGNTAQTVAALEQQVQRQLQDQKPQLAIPLLRQVVSL
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
EPGNVNAQANLGVLLFFQGSYRDAIPPMRAALQLHPELSKIQALLGMAEKRTGSPQQAQQ
CCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHH
DLERAFPNLDDKKFQVEAGLELIELHVASAQLDRALALAARLQELAPQNPQILLTQYQIS
HHHHHCCCCCCCCEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHH
RQVMYQSLLGMMMVSPDSAEMRMIMGGELGRQGDRAAAIAQYREAIRLNPKLPGVHYELA
HHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHH
ELLRSSSDAASNAQADEEYRAAIGLNPYDILSWRRLGEIASAKGDFSAAEEHYKKALALQ
HHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
PKDSDAKTGLAIVFISTNRTTGAIHLLEDALKDDPANLVAHYRLSGLYRRAGRSADAERE
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
MESFRHYQDLKDQLGKVFKQLAAPGNPK
HHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA