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The map label for this gene is 116621174

Identifier: 116621174

GI number: 116621174

Start: 2610791

End: 2611300

Strand: Reverse

Name: 116621174

Synonym: Acid_2055

Alternate gene names: NA

Gene position: 2611300-2610791 (Counterclockwise)

Preceding gene: 116621175

Following gene: 116621173

Centisome position: 26.2

GC content: 61.37

Gene sequence:

>510_bases
ATGCAAACACTAACGGATCTCTACAGGCTCGCTTACTTCCTTACGGGCAAATGCGATGCAGGGCTCGATGCCACACTTGA
GGCGGTCGATTCCACCGGGGATTTTTTCTCAGGGTGGATGACGGCCTGGTCGCGGCGAGTCGTAATTTCGAAAGCGCTCG
CGGGGATACGCGACGAACTTACCGCCTCGGCGCGCCGGACTTCCGTGAAGCGCGCGACAACAGAGCTGCCGTCGCGAGAT
TGGGCGTTGAGCAGCGGCACGAAGGCGGCGGAGTTTACACGGGCAATCCTGGCCATCGATTGGTTTCCCCGGTGCGCGCT
GCTGCTTTCGATCTTCGAGCGCATGTCCGTCGAGGATGCGGCGACGCTGCTGGATGCGACGCCGGAACTGGTGCGCAAAG
GGCAGGCCATCGGTCTGCAGGAGCTGACCGTGAACCTGGCGCGCGGGCAGGGGTGGACATCCGCGGAACAAGTTCCTTAC
GTAATGACGGGTGAGATGCAACATGTCTGA

Upstream 100 bases:

>100_bases
GTCGGTGCCTGCTCCAGATGATGTATGGCAACGGAGTCGATTTCCGGCGGGCGGGCCTGGCCGTGCAAGACATTCTCGAA
CAGATCACGGGGCAACCGGA

Downstream 100 bases:

>100_bases
GATAGCGGCATACGGAAAACTGGGTGCACTCTGGTGTGAGATCATGCACGACTCGGCCACGTGGCCGATTCATGGGCGGT
ATCAATGCCGAACCTGCGGC

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MQTLTDLYRLAYFLTGKCDAGLDATLEAVDSTGDFFSGWMTAWSRRVVISKALAGIRDELTASARRTSVKRATTELPSRD
WALSSGTKAAEFTRAILAIDWFPRCALLLSIFERMSVEDAATLLDATPELVRKGQAIGLQELTVNLARGQGWTSAEQVPY
VMTGEMQHV

Sequences:

>Translated_169_residues
MQTLTDLYRLAYFLTGKCDAGLDATLEAVDSTGDFFSGWMTAWSRRVVISKALAGIRDELTASARRTSVKRATTELPSRD
WALSSGTKAAEFTRAILAIDWFPRCALLLSIFERMSVEDAATLLDATPELVRKGQAIGLQELTVNLARGQGWTSAEQVPY
VMTGEMQHV
>Mature_169_residues
MQTLTDLYRLAYFLTGKCDAGLDATLEAVDSTGDFFSGWMTAWSRRVVISKALAGIRDELTASARRTSVKRATTELPSRD
WALSSGTKAAEFTRAILAIDWFPRCALLLSIFERMSVEDAATLLDATPELVRKGQAIGLQELTVNLARGQGWTSAEQVPY
VMTGEMQHV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18594; Mature: 18594

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLTDLYRLAYFLTGKCDAGLDATLEAVDSTGDFFSGWMTAWSRRVVISKALAGIRDEL
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TASARRTSVKRATTELPSRDWALSSGTKAAEFTRAILAIDWFPRCALLLSIFERMSVEDA
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
ATLLDATPELVRKGQAIGLQELTVNLARGQGWTSAEQVPYVMTGEMQHV
HHHHHCCHHHHHCCCCCCHHHHHHHHHCCCCCCCHHCCCEEECCCCCCC
>Mature Secondary Structure
MQTLTDLYRLAYFLTGKCDAGLDATLEAVDSTGDFFSGWMTAWSRRVVISKALAGIRDEL
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TASARRTSVKRATTELPSRDWALSSGTKAAEFTRAILAIDWFPRCALLLSIFERMSVEDA
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
ATLLDATPELVRKGQAIGLQELTVNLARGQGWTSAEQVPYVMTGEMQHV
HHHHHCCHHHHHCCCCCCHHHHHHHHHCCCCCCCHHCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA