| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621168
Identifier: 116621168
GI number: 116621168
Start: 2602567
End: 2604606
Strand: Reverse
Name: 116621168
Synonym: Acid_2049
Alternate gene names: NA
Gene position: 2604606-2602567 (Counterclockwise)
Preceding gene: 116621170
Following gene: 116621167
Centisome position: 26.14
GC content: 61.67
Gene sequence:
>2040_bases ATGTATTCTAGACTCATGCTTCGAGCCGAGTGGATTCTAGCTTTGCCCCTGGCGTGGAGTCTGAACGCGCAGCCTACGTT CACGAAGAATGTCGCGCCGATATTGCAATCGCGGTGCCAGGTCTGCCATCGTCCGGGCGAGGCCGCGCCATTTTCGCTGA TGACCTACGGCCAGGCGCGCCCGTGGGCCAAAGCCATCCGCGAAGCCGTGCTGGCGCGCAAGATGCCGCCGTGGTTTGCC GACCCCCACTACGGCAAGTTCGCCAACGATAGCTCGCTCTCGAAGCAGGAGATCGACACCATCGCCGCGTGGGTGGACGG CGGCGCCCGCCAGGGAGACCCGAAGGACATGCCGCCGCCGCGTGAGTTCGCCGAAGGATGGGCGATCCCCACACCGGATG CGGTGATCGAATTGCCGGTACCGTTCGAGATCCCGGCGACCGGCACCATCGAGTATCAGCACATCCTGATCCCCGCCCCC TTCGCGACCGACAAATGGGTCCAATTCGCCGAGGCCCGTCCCACCGACCGCACCCGCGTCCATCACATCATCGCCTTCAT CCGCGAACCGGGGTCGGACTGGTTGAAGGAGGCGAGGCCCGGAATTCCCTTCGTCCCCGCCAAACCCGCGGACAACGCCG ATATCGACACCAGTAAACTGCCGAGCGATTTCCTGGTCGGCTACGCGCCCGGACAACCGCCCGAGAAATTTGAGCCCGGC CAGGCGAAGCTCATTCGCGCCGGCTCCGATATCATTTTGCAGATCCACTACACCACTAACGGAAAGCCCGGCGCCGACCG CAGCCGGATCGGGCTGGTCTTCGCCAAAGAACCGCCGGCCAAACGCGTCTTCACCGTATCGGCGACCAACGGCAAGTTCA AGATTCCCGCAGGCGCGCCCAGTCACAGGGTGGATGCGGAATTTGAGCTCGGCTCCGCCGTGACGTTGTATGGCCTGCAC CCCCACATGCACGGGCGCGGCAAGGACTTTGAGTATCGCGTCAAATATCCCGATGGAGAAACGCGTACGCTGCTCAAGGT CCCGAACTACCGCGCCACCTGGCAGCTCTGGTACGAATTGAGCGAGCCGATCGCTCTGCCGAAGGGCGCGAAAATCGAAT GCACCGCGCACTTCGATAATTCGCCGAATAACGAGCTCAACCCCGACCCCACCAGAGACGTGGTTTGGGGCGACCAGAGC TGGGACGAAATGATGGTCGGCTTCTTCAATGTGGGCTTCGACGCCGGCATGCCGCTCAAAGAGCTCTTCCCCCCGGCGCA GACCCCGCAATCCAGCCCGCCGCCGCTCCGAAAGAAATTGCTGGTCATCGGCGAAGAGAAAGGCTACCGCCACGAAGCCG TCACGCACGCGATGGCGGCCATCGAGCGCCTGGGCCGCGAGAGCGGATTGTGGGATACCGTAATTCGCACCGATACCGAA GCTCTGACGAAGAAGAAGCTCGAATACAACGCCAGGAACCTGAATGATTTCGATGCCGTGCTGTTCTACACCGGCGGCAC GCTGGAGATGGACGAACAGCAGAAGGCCGATTTTCTTTCATTCATTCACGACGATGGCAAGGGCTTCATCGGCGTCCACA GCGCCACCATCACTTTTACCAAATGGCCGGAGTACGGCGAAATGATCGGCGGCTTCTTCGACGAACATCCGTGGGGAACC TTCGACGCCCCGATTCTGGTGGAGGACGACCAATTCCCCGGGATGAAGCAGTGGGCGCGCGCATTCACCATCAAGGACGA GATCTACCAGGTGAAGAACTTCTCCCGCGACAACACGCGCGTCCTCATGCGGCTCGATCCCGCGAAGCTCGATCTGGCCA ATCCGCGGGTTCACCGCAAAGACAACGATTTCGCGGTCTCCTGGGCCAGGATGTACGGCAAGGGTCGCGTGTTTTATTCC ACGCTTGGCCACGTGGAAGCCAATTGGGACCAGCCGGAAATGCAGAAGATGTACATCGAAGCCATCAAATGGGCGCTCCG CCTGGTAGACGCCGATGTGACGCCGCGCCCCGCGCGCTGA
Upstream 100 bases:
>100_bases AGGGAGCGTCCGTTGTACGTGTAAGCCCACGATTTCAATTTGTGGGGCAGGCAATCGTGCCTGCAGCCGGCTTTCAGCCG GCTTGCCGCCCGCCCGAAGT
Downstream 100 bases:
>100_bases GAGGTATACAGGATGACGCGAAGAACATTCAGCGCCGCGATTGGCGCCGGGCTTGCCGCGGCGGGCTCCGCGCCGGCGGC CGGAAAGCTCAAACTCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Glycosyl Hydrolase; PKD Domain Containing Protein; Thiol-Disulfide Isomerase Or Thioredoxin; Crp/FNR Family Transcriptional Regulator; Sigma-70 Factor; Membrane-Bound Dehydrogenase Domain Protein; Cytochrome C Class I; Monooxygenase; Secreted Protein; LPXTG-Motif Cell Wall Anchor Domain Protein; TPR Repeat-Containing Protein; Redoxin Domain Protein; Crp/Fnr Family Transcriptional Regulator; Pkd Domain Containing Protein; Glucose/Sorbosone Dehydrogenase; Class I Glutamine Amidotransferase-Like Protein
Number of amino acids: Translated: 679; Mature: 679
Protein sequence:
>679_residues MYSRLMLRAEWILALPLAWSLNAQPTFTKNVAPILQSRCQVCHRPGEAAPFSLMTYGQARPWAKAIREAVLARKMPPWFA DPHYGKFANDSSLSKQEIDTIAAWVDGGARQGDPKDMPPPREFAEGWAIPTPDAVIELPVPFEIPATGTIEYQHILIPAP FATDKWVQFAEARPTDRTRVHHIIAFIREPGSDWLKEARPGIPFVPAKPADNADIDTSKLPSDFLVGYAPGQPPEKFEPG QAKLIRAGSDIILQIHYTTNGKPGADRSRIGLVFAKEPPAKRVFTVSATNGKFKIPAGAPSHRVDAEFELGSAVTLYGLH PHMHGRGKDFEYRVKYPDGETRTLLKVPNYRATWQLWYELSEPIALPKGAKIECTAHFDNSPNNELNPDPTRDVVWGDQS WDEMMVGFFNVGFDAGMPLKELFPPAQTPQSSPPPLRKKLLVIGEEKGYRHEAVTHAMAAIERLGRESGLWDTVIRTDTE ALTKKKLEYNARNLNDFDAVLFYTGGTLEMDEQQKADFLSFIHDDGKGFIGVHSATITFTKWPEYGEMIGGFFDEHPWGT FDAPILVEDDQFPGMKQWARAFTIKDEIYQVKNFSRDNTRVLMRLDPAKLDLANPRVHRKDNDFAVSWARMYGKGRVFYS TLGHVEANWDQPEMQKMYIEAIKWALRLVDADVTPRPAR
Sequences:
>Translated_679_residues MYSRLMLRAEWILALPLAWSLNAQPTFTKNVAPILQSRCQVCHRPGEAAPFSLMTYGQARPWAKAIREAVLARKMPPWFA DPHYGKFANDSSLSKQEIDTIAAWVDGGARQGDPKDMPPPREFAEGWAIPTPDAVIELPVPFEIPATGTIEYQHILIPAP FATDKWVQFAEARPTDRTRVHHIIAFIREPGSDWLKEARPGIPFVPAKPADNADIDTSKLPSDFLVGYAPGQPPEKFEPG QAKLIRAGSDIILQIHYTTNGKPGADRSRIGLVFAKEPPAKRVFTVSATNGKFKIPAGAPSHRVDAEFELGSAVTLYGLH PHMHGRGKDFEYRVKYPDGETRTLLKVPNYRATWQLWYELSEPIALPKGAKIECTAHFDNSPNNELNPDPTRDVVWGDQS WDEMMVGFFNVGFDAGMPLKELFPPAQTPQSSPPPLRKKLLVIGEEKGYRHEAVTHAMAAIERLGRESGLWDTVIRTDTE ALTKKKLEYNARNLNDFDAVLFYTGGTLEMDEQQKADFLSFIHDDGKGFIGVHSATITFTKWPEYGEMIGGFFDEHPWGT FDAPILVEDDQFPGMKQWARAFTIKDEIYQVKNFSRDNTRVLMRLDPAKLDLANPRVHRKDNDFAVSWARMYGKGRVFYS TLGHVEANWDQPEMQKMYIEAIKWALRLVDADVTPRPAR >Mature_679_residues MYSRLMLRAEWILALPLAWSLNAQPTFTKNVAPILQSRCQVCHRPGEAAPFSLMTYGQARPWAKAIREAVLARKMPPWFA DPHYGKFANDSSLSKQEIDTIAAWVDGGARQGDPKDMPPPREFAEGWAIPTPDAVIELPVPFEIPATGTIEYQHILIPAP FATDKWVQFAEARPTDRTRVHHIIAFIREPGSDWLKEARPGIPFVPAKPADNADIDTSKLPSDFLVGYAPGQPPEKFEPG QAKLIRAGSDIILQIHYTTNGKPGADRSRIGLVFAKEPPAKRVFTVSATNGKFKIPAGAPSHRVDAEFELGSAVTLYGLH PHMHGRGKDFEYRVKYPDGETRTLLKVPNYRATWQLWYELSEPIALPKGAKIECTAHFDNSPNNELNPDPTRDVVWGDQS WDEMMVGFFNVGFDAGMPLKELFPPAQTPQSSPPPLRKKLLVIGEEKGYRHEAVTHAMAAIERLGRESGLWDTVIRTDTE ALTKKKLEYNARNLNDFDAVLFYTGGTLEMDEQQKADFLSFIHDDGKGFIGVHSATITFTKWPEYGEMIGGFFDEHPWGT FDAPILVEDDQFPGMKQWARAFTIKDEIYQVKNFSRDNTRVLMRLDPAKLDLANPRVHRKDNDFAVSWARMYGKGRVFYS TLGHVEANWDQPEMQKMYIEAIKWALRLVDADVTPRPAR
Specific function: Unknown
COG id: COG3828
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76577; Mature: 76577
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSRLMLRAEWILALPLAWSLNAQPTFTKNVAPILQSRCQVCHRPGEAAPFSLMTYGQAR CCCHHEEEECEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC PWAKAIREAVLARKMPPWFADPHYGKFANDSSLSKQEIDTIAAWVDGGARQGDPKDMPPP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC REFAEGWAIPTPDAVIELPVPFEIPATGTIEYQHILIPAPFATDKWVQFAEARPTDRTRV HHHHCCCCCCCCCCEEEECCCEECCCCCEEEEEEEEEECCCCCHHHHHHHHCCCCCHHHH HHIIAFIREPGSDWLKEARPGIPFVPAKPADNADIDTSKLPSDFLVGYAPGQPPEKFEPG HHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCHHEEECCCCCCCCCCCCC QAKLIRAGSDIILQIHYTTNGKPGADRSRIGLVFAKEPPAKRVFTVSATNGKFKIPAGAP CEEEEECCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCEEECCCCCC SHRVDAEFELGSAVTLYGLHPHMHGRGKDFEYRVKYPDGETRTLLKVPNYRATWQLWYEL CCCCCCEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEEEEC SEPIALPKGAKIECTAHFDNSPNNELNPDPTRDVVWGDQSWDEMMVGFFNVGFDAGMPLK CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCHH ELFPPAQTPQSSPPPLRKKLLVIGEEKGYRHEAVTHAMAAIERLGRESGLWDTVIRTDTE HHCCCCCCCCCCCCHHHCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHH ALTKKKLEYNARNLNDFDAVLFYTGGTLEMDEQQKADFLSFIHDDGKGFIGVHSATITFT HHHHHHHHCCCCCCCCCEEEEEEECCEEEECHHHHHHHHHHHHCCCCCEEEEEEEEEEEE KWPEYGEMIGGFFDEHPWGTFDAPILVEDDQFPGMKQWARAFTIKDEIYQVKNFSRDNTR ECCCHHHHHCCHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE VLMRLDPAKLDLANPRVHRKDNDFAVSWARMYGKGRVFYSTLGHVEANWDQPEMQKMYIE EEEEECCCCEECCCCCCCCCCCCCEEEEEHHHCCCEEEEEECCCEECCCCCHHHHHHHHH AIKWALRLVDADVTPRPAR HHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MYSRLMLRAEWILALPLAWSLNAQPTFTKNVAPILQSRCQVCHRPGEAAPFSLMTYGQAR CCCHHEEEECEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC PWAKAIREAVLARKMPPWFADPHYGKFANDSSLSKQEIDTIAAWVDGGARQGDPKDMPPP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC REFAEGWAIPTPDAVIELPVPFEIPATGTIEYQHILIPAPFATDKWVQFAEARPTDRTRV HHHHCCCCCCCCCCEEEECCCEECCCCCEEEEEEEEEECCCCCHHHHHHHHCCCCCHHHH HHIIAFIREPGSDWLKEARPGIPFVPAKPADNADIDTSKLPSDFLVGYAPGQPPEKFEPG HHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCHHEEECCCCCCCCCCCCC QAKLIRAGSDIILQIHYTTNGKPGADRSRIGLVFAKEPPAKRVFTVSATNGKFKIPAGAP CEEEEECCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCEEECCCCCC SHRVDAEFELGSAVTLYGLHPHMHGRGKDFEYRVKYPDGETRTLLKVPNYRATWQLWYEL CCCCCCEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEEEEC SEPIALPKGAKIECTAHFDNSPNNELNPDPTRDVVWGDQSWDEMMVGFFNVGFDAGMPLK CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCHH ELFPPAQTPQSSPPPLRKKLLVIGEEKGYRHEAVTHAMAAIERLGRESGLWDTVIRTDTE HHCCCCCCCCCCCCHHHCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHH ALTKKKLEYNARNLNDFDAVLFYTGGTLEMDEQQKADFLSFIHDDGKGFIGVHSATITFT HHHHHHHHCCCCCCCCCEEEEEEECCEEEECHHHHHHHHHHHHCCCCCEEEEEEEEEEEE KWPEYGEMIGGFFDEHPWGTFDAPILVEDDQFPGMKQWARAFTIKDEIYQVKNFSRDNTR ECCCHHHHHCCHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE VLMRLDPAKLDLANPRVHRKDNDFAVSWARMYGKGRVFYSTLGHVEANWDQPEMQKMYIE EEEEECCCCEECCCCCCCCCCCCCEEEEEHHHCCCEEEEEECCCEECCCCCHHHHHHHHH AIKWALRLVDADVTPRPAR HHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA