| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116621100
Identifier: 116621100
GI number: 116621100
Start: 2501133
End: 2502461
Strand: Direct
Name: 116621100
Synonym: Acid_1981
Alternate gene names: NA
Gene position: 2501133-2502461 (Clockwise)
Preceding gene: 116621099
Following gene: 116621101
Centisome position: 25.1
GC content: 63.51
Gene sequence:
>1329_bases ATGTCACGGTTTCTGATCACGTGCTGGCCGTTTGTCGGACACCTTTACCCGCAGATCAGCGTGGCCCTTGCTTTGCGCGA TCGCGGCCACGAAGTCGCCTTTTACAGCCACGAATCCACACGTGCCATCGTTCAGGGTGAAGGCTTCAAGCTGTTCCCTT TCGTGCAAGTCGATGAACGCCGTTACGAACGCATTCACGCCCTGGAAGCCAAGGTTCCGCCAACCCAGCCGGGTCACCAA ACCATTTCCGTTTCGATGACGGCCTATCGCGACATGCTTGCCGATTCGATTCCGGAACAAGTGGCGGACCTGATGCCGAT CCTCGAAAACTGGCGGCCCGATGTACTGGTCACCGACCTGGCGCTGTGGGGGCCGATCGTGGTGATCTGGGAAATGACCG GTATCCCGGTAGCGCTTTCGTCCACCATGATGGGCTCCATGATCCCGGGGCCGGACGCACCGCCGTGGGGTCCTGGTCTG CCTCCACCGAGAACCTCCGCAACCCGATTCCTTTCGCGGATAACGGAGTTGGGAGTGGACATTGTCGCGCATAACCTCCG CCGTCGCGTCAATCAGATCAGGGCGCGGTACGGCCTTCGTCCGATGGGCTGCTCGGTGACTGCTTTCACCGGCCGGTTAC CCCTCTACCTCATACCCAGCCTGCCGGAACTCGACTACAACCGGCAGGACCAGCCGCCGAATGTTCACTACATCGGTCCC TGCGTATGGACCAAGCCGGTTGGCGCACCTCCGCCGGAATGGCTGAACCAGTTACCCACCGACCGGCCTTGGGTCCACGC GACCGAGGGAACGGCGCAATACCAGGAGCCCTTCCTCTTGCGTGCCACGGCGCAGGCGCTCGCCGGCCTGCCTATGGAAG TAATCCTGACTACAGGCCAAAATCGTGATCCAGCCACGCTGGGCCTCGATCCTTTGCCTGCGAACGTCCGCGTGGAGCGT TGGCTCAGTCACGAAAGCCTGCTGCCGCGCTGCGCGGCAATCGTAACCACAGGAGGGCCCGCCACCGTTATGGCCGCGCT GAAGGCCGGCGTGCCGCTGGTCATGGTTCCGACGTTTTGGGAGAAGAACGATAACGCGCAGCGCGTGGTTGAAGCAGGCG TGGGACTTCGGCTTGCGCCGAGGCGCTGCTCTCCGGATCGCGTGCGCGCCGCCGTCATGCGGCTGCTTGAGGAGCCACAC TTCCGCGAGAATGCCCGCCGGATCGCGCAGAGGCTCTCGGAGGCATCGGGAGCCCGGGGAGCCGCCCAGCTGCTCGAGAA TCTCGCGCACGGGACGCTGGCGTCCGCCACGGCAAAGGCCGCGTCATGA
Upstream 100 bases:
>100_bases TGTCCGCGCATTATAGCGGTCCCGACCGGGCATCGGAGTTATTGGAAGGTCTATGTACAACGGCTGCTGCCATGCCGGGG AGTTACGGAGGTAACTATCG
Downstream 100 bases:
>100_bases TTCGGTATTGGCTCACGAATGTCTGCAGCTTCGTTCTGTTAGTCGCGGTGTGCCCGCTGGTGAGCGGCCAGTCTCCCACG AAGACGGGCGCCGGAAGGCC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MSRFLITCWPFVGHLYPQISVALALRDRGHEVAFYSHESTRAIVQGEGFKLFPFVQVDERRYERIHALEAKVPPTQPGHQ TISVSMTAYRDMLADSIPEQVADLMPILENWRPDVLVTDLALWGPIVVIWEMTGIPVALSSTMMGSMIPGPDAPPWGPGL PPPRTSATRFLSRITELGVDIVAHNLRRRVNQIRARYGLRPMGCSVTAFTGRLPLYLIPSLPELDYNRQDQPPNVHYIGP CVWTKPVGAPPPEWLNQLPTDRPWVHATEGTAQYQEPFLLRATAQALAGLPMEVILTTGQNRDPATLGLDPLPANVRVER WLSHESLLPRCAAIVTTGGPATVMAALKAGVPLVMVPTFWEKNDNAQRVVEAGVGLRLAPRRCSPDRVRAAVMRLLEEPH FRENARRIAQRLSEASGARGAAQLLENLAHGTLASATAKAAS
Sequences:
>Translated_442_residues MSRFLITCWPFVGHLYPQISVALALRDRGHEVAFYSHESTRAIVQGEGFKLFPFVQVDERRYERIHALEAKVPPTQPGHQ TISVSMTAYRDMLADSIPEQVADLMPILENWRPDVLVTDLALWGPIVVIWEMTGIPVALSSTMMGSMIPGPDAPPWGPGL PPPRTSATRFLSRITELGVDIVAHNLRRRVNQIRARYGLRPMGCSVTAFTGRLPLYLIPSLPELDYNRQDQPPNVHYIGP CVWTKPVGAPPPEWLNQLPTDRPWVHATEGTAQYQEPFLLRATAQALAGLPMEVILTTGQNRDPATLGLDPLPANVRVER WLSHESLLPRCAAIVTTGGPATVMAALKAGVPLVMVPTFWEKNDNAQRVVEAGVGLRLAPRRCSPDRVRAAVMRLLEEPH FRENARRIAQRLSEASGARGAAQLLENLAHGTLASATAKAAS >Mature_441_residues SRFLITCWPFVGHLYPQISVALALRDRGHEVAFYSHESTRAIVQGEGFKLFPFVQVDERRYERIHALEAKVPPTQPGHQT ISVSMTAYRDMLADSIPEQVADLMPILENWRPDVLVTDLALWGPIVVIWEMTGIPVALSSTMMGSMIPGPDAPPWGPGLP PPRTSATRFLSRITELGVDIVAHNLRRRVNQIRARYGLRPMGCSVTAFTGRLPLYLIPSLPELDYNRQDQPPNVHYIGPC VWTKPVGAPPPEWLNQLPTDRPWVHATEGTAQYQEPFLLRATAQALAGLPMEVILTTGQNRDPATLGLDPLPANVRVERW LSHESLLPRCAAIVTTGGPATVMAALKAGVPLVMVPTFWEKNDNAQRVVEAGVGLRLAPRRCSPDRVRAAVMRLLEEPHF RENARRIAQRLSEASGARGAAQLLENLAHGTLASATAKAAS
Specific function: Involved in glycosylation steps downstream of mono-O- methyl-glycosyl-p-hydroxybenzoic acid derivative (p-HBAD I) and 2- O-methyl-rhamnosyl-phenolphthiocerol dimycocerosate (mycoside B) during the p-hydroxybenzoic acid derivatives (p-HBAD) and glycosylate
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glycosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI189491660, Length=426, Percent_Identity=23.943661971831, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI40254471, Length=426, Percent_Identity=23.943661971831, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI16596680, Length=128, Percent_Identity=29.6875, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI190194389, Length=129, Percent_Identity=29.4573643410853, Blast_Score=66, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002213 [H]
Pfam domain/function: PF00201 UDPGT [H]
EC number: NA
Molecular weight: Translated: 48726; Mature: 48595
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFLITCWPFVGHLYPQISVALALRDRGHEVAFYSHESTRAIVQGEGFKLFPFVQVDER CCCEEEEHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCCEEEEECCCEEEEEEEEECHH RYERIHALEAKVPPTQPGHQTISVSMTAYRDMLADSIPEQVADLMPILENWRPDVLVTDL HHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH ALWGPIVVIWEMTGIPVALSSTMMGSMIPGPDAPPWGPGLPPPRTSATRFLSRITELGVD HHHCCEEEEEECCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH IVAHNLRRRVNQIRARYGLRPMGCSVTAFTGRLPLYLIPSLPELDYNRQDQPPNVHYIGP HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCEEEECC CVWTKPVGAPPPEWLNQLPTDRPWVHATEGTAQYQEPFLLRATAQALAGLPMEVILTTGQ EEEECCCCCCCHHHHHCCCCCCCEEEECCCCCHHCCCCHHHHHHHHHHCCCEEEEEECCC NRDPATLGLDPLPANVRVERWLSHESLLPRCAAIVTTGGPATVMAALKAGVPLVMVPTFW CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHCCCCEEEECCCC EKNDNAQRVVEAGVGLRLAPRRCSPDRVRAAVMRLLEEPHFRENARRIAQRLSEASGARG CCCCCHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCH AAQLLENLAHGTLASATAKAAS HHHHHHHHHCCHHHHHHHHCCC >Mature Secondary Structure SRFLITCWPFVGHLYPQISVALALRDRGHEVAFYSHESTRAIVQGEGFKLFPFVQVDER CCEEEEHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCCEEEEECCCEEEEEEEEECHH RYERIHALEAKVPPTQPGHQTISVSMTAYRDMLADSIPEQVADLMPILENWRPDVLVTDL HHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH ALWGPIVVIWEMTGIPVALSSTMMGSMIPGPDAPPWGPGLPPPRTSATRFLSRITELGVD HHHCCEEEEEECCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH IVAHNLRRRVNQIRARYGLRPMGCSVTAFTGRLPLYLIPSLPELDYNRQDQPPNVHYIGP HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCEEEECC CVWTKPVGAPPPEWLNQLPTDRPWVHATEGTAQYQEPFLLRATAQALAGLPMEVILTTGQ EEEECCCCCCCHHHHHCCCCCCCEEEECCCCCHHCCCCHHHHHHHHHHCCCEEEEEECCC NRDPATLGLDPLPANVRVERWLSHESLLPRCAAIVTTGGPATVMAALKAGVPLVMVPTFW CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHCCCCEEEECCCC EKNDNAQRVVEAGVGLRLAPRRCSPDRVRAAVMRLLEEPHFRENARRIAQRLSEASGARG CCCCCHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCH AAQLLENLAHGTLASATAKAAS HHHHHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA