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The map label for this gene is 116621084

Identifier: 116621084

GI number: 116621084

Start: 2463081

End: 2464127

Strand: Direct

Name: 116621084

Synonym: Acid_1965

Alternate gene names: NA

Gene position: 2463081-2464127 (Clockwise)

Preceding gene: 116621083

Following gene: 116621086

Centisome position: 24.72

GC content: 62.75

Gene sequence:

>1047_bases
GTGCCGCTCCGGATTGCTGTTTTCCTCTGCGCTTCGGCCATGACTTGGGCGCAGACCCCTCGCCCCGATCTCCAGAGTCA
GCGACAGGGCGCGCAACTGGGCGCCGCCTCCGAACACTTGCAACAGGGGAGAGTCGAACAGGCGATCCGCGAGTGCAAGG
TCGTGCTGGCGGCCGATCCGCGCTCCGCACCCGCACACATGCTTCTGGGACTGGCGTATCTCGCGCAGCGGTCGAGTGCC
ATGATCGGCGAGGCCAAAGCGGAATTGCAGCAGGCGCTCGATCTGGATCCTGAGCTTCTGTGGGCGCGCTTCTACCTGGC
TCGCCTGTATCTCGACCTGGGCTTGAGCGAAAAGGCCGAGGAGCAACTGGAGCGCGGTCTCAAGCAGCGCCCTGGTTTCC
CCACTTTCCTTTCACTGCTGGGTGAAGTCCGGCGCAAACTGGGAGATCCTGGCGCCTCTGTGGAATTGAACCGCAAGGCG
CTCGATGCCGATGCCGCAATGACCCCGGCGCATTATTTCCTGGCGCTTGCTTATCTGGACCTGAAACAGGAACAGGCCTC
AATAGCCGAGTTCGAAAAAGCCATTCACTCGCCCTCCGTCACGCCGGAGATGTACAACGCGCTGGCGTCGCTGTACATCA
AGAGAGGGCAGTTCGCCGAAGCGGAGGATTTCTGCCGGAAAGCCATCGCGCTGGACCGCTCGCGGCCCGATGCATACCTG
AACCTGGCCCGAGTCTATAACGCACAACACGCTAGTGACAAGGCGCTGGAGGTTCTGCGCGCTGCGCTGCCGGAGGGCAA
GGAGTTCCCCGTGTCCGAATATTACCAGGGGCTGCAGGCGGATCTCGCGGTGGAGCGCGGCGCCGCGTACACGGCCAAGA
AAATGTACGCTCTGGCGATCGACGAGTATGCTCGCGCACTCGACTTTGACCCGCGCCGCGCCCTCGTCCACCGGCGCCTG
GCGGAACTCTATGTACAGAAGGGAGACGCGGCCAGCGCCGCTCTGCATACGAAGGAAGCGGAAAAGCTCGAGAAAGGCCA
AAGGTAG

Upstream 100 bases:

>100_bases
AGCGTTCGCGCCGGCCAGATTTTGCTGCTGGATGAGGCCAATGCTAAGGCCGACGCCAGGGCCGACAACGGGCGCTGAAA
GCCTCAGGTATAATCTGACC

Downstream 100 bases:

>100_bases
GACTGGCGTTCCTTGGATTTGAGGCTGGGGGGATGGACTGGATCCCTCCCCCCACCCCAGGGCTTTAGAAGGTAAGGCGA
AGCTCGAGTTGAACGCTACG

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MPLRIAVFLCASAMTWAQTPRPDLQSQRQGAQLGAASEHLQQGRVEQAIRECKVVLAADPRSAPAHMLLGLAYLAQRSSA
MIGEAKAELQQALDLDPELLWARFYLARLYLDLGLSEKAEEQLERGLKQRPGFPTFLSLLGEVRRKLGDPGASVELNRKA
LDADAAMTPAHYFLALAYLDLKQEQASIAEFEKAIHSPSVTPEMYNALASLYIKRGQFAEAEDFCRKAIALDRSRPDAYL
NLARVYNAQHASDKALEVLRAALPEGKEFPVSEYYQGLQADLAVERGAAYTAKKMYALAIDEYARALDFDPRRALVHRRL
AELYVQKGDAASAALHTKEAEKLEKGQR

Sequences:

>Translated_348_residues
MPLRIAVFLCASAMTWAQTPRPDLQSQRQGAQLGAASEHLQQGRVEQAIRECKVVLAADPRSAPAHMLLGLAYLAQRSSA
MIGEAKAELQQALDLDPELLWARFYLARLYLDLGLSEKAEEQLERGLKQRPGFPTFLSLLGEVRRKLGDPGASVELNRKA
LDADAAMTPAHYFLALAYLDLKQEQASIAEFEKAIHSPSVTPEMYNALASLYIKRGQFAEAEDFCRKAIALDRSRPDAYL
NLARVYNAQHASDKALEVLRAALPEGKEFPVSEYYQGLQADLAVERGAAYTAKKMYALAIDEYARALDFDPRRALVHRRL
AELYVQKGDAASAALHTKEAEKLEKGQR
>Mature_347_residues
PLRIAVFLCASAMTWAQTPRPDLQSQRQGAQLGAASEHLQQGRVEQAIRECKVVLAADPRSAPAHMLLGLAYLAQRSSAM
IGEAKAELQQALDLDPELLWARFYLARLYLDLGLSEKAEEQLERGLKQRPGFPTFLSLLGEVRRKLGDPGASVELNRKAL
DADAAMTPAHYFLALAYLDLKQEQASIAEFEKAIHSPSVTPEMYNALASLYIKRGQFAEAEDFCRKAIALDRSRPDAYLN
LARVYNAQHASDKALEVLRAALPEGKEFPVSEYYQGLQADLAVERGAAYTAKKMYALAIDEYARALDFDPRRALVHRRLA
ELYVQKGDAASAALHTKEAEKLEKGQR

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=306, Percent_Identity=25.4901960784314, Blast_Score=65, Evalue=1e-10,
Organism=Homo sapiens, GI32307150, Length=306, Percent_Identity=25.4901960784314, Blast_Score=65, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI115532692, Length=310, Percent_Identity=24.8387096774194, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI115532690, Length=310, Percent_Identity=24.8387096774194, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24647123, Length=251, Percent_Identity=25.4980079681275, Blast_Score=69, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38643; Mature: 38511

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLRIAVFLCASAMTWAQTPRPDLQSQRQGAQLGAASEHLQQGRVEQAIRECKVVLAADP
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCC
RSAPAHMLLGLAYLAQRSSAMIGEAKAELQQALDLDPELLWARFYLARLYLDLGLSEKAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHH
EQLERGLKQRPGFPTFLSLLGEVRRKLGDPGASVELNRKALDADAAMTPAHYFLALAYLD
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECHHHHCCCHHCCHHHHHHHHHHHH
LKQEQASIAEFEKAIHSPSVTPEMYNALASLYIKRGQFAEAEDFCRKAIALDRSRPDAYL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHH
NLARVYNAQHASDKALEVLRAALPEGKEFPVSEYYQGLQADLAVERGAAYTAKKMYALAI
HHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
DEYARALDFDPRRALVHRRLAELYVQKGDAASAALHTKEAEKLEKGQR
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PLRIAVFLCASAMTWAQTPRPDLQSQRQGAQLGAASEHLQQGRVEQAIRECKVVLAADP
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCC
RSAPAHMLLGLAYLAQRSSAMIGEAKAELQQALDLDPELLWARFYLARLYLDLGLSEKAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHH
EQLERGLKQRPGFPTFLSLLGEVRRKLGDPGASVELNRKALDADAAMTPAHYFLALAYLD
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECHHHHCCCHHCCHHHHHHHHHHHH
LKQEQASIAEFEKAIHSPSVTPEMYNALASLYIKRGQFAEAEDFCRKAIALDRSRPDAYL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHH
NLARVYNAQHASDKALEVLRAALPEGKEFPVSEYYQGLQADLAVERGAAYTAKKMYALAI
HHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
DEYARALDFDPRRALVHRRLAELYVQKGDAASAALHTKEAEKLEKGQR
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA