| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116621083
Identifier: 116621083
GI number: 116621083
Start: 2461352
End: 2463058
Strand: Direct
Name: 116621083
Synonym: Acid_1964
Alternate gene names: NA
Gene position: 2461352-2463058 (Clockwise)
Preceding gene: 116621082
Following gene: 116621084
Centisome position: 24.7
GC content: 60.46
Gene sequence:
>1707_bases ATGCCGCTCCTGCGCAATGTTTGCCTGATCTTCGGCGCGAATTTGCTGCTCTTTGCGGTCTACAGCGAGCAGGCCGCCAG ACCGGCGCCCCGCGAAGCCGGCCGGGTGCAGCTCAACGAAGTTGCAGCGGCGTCGGGCATTACCTTTCGCCACGAAAACG GGGCTTCAGCCGAGAAGTACATGTTCGAGACCTTCGGTTCCGGAGTGGGCGTGATCGATTTCGACAACGACGGCCTGCCC GACCTGTTTTTCGCCAACGGAGCCGACCTGGCCCACGGCAAACCATCGCCTGGCAATGCGCTCTATCGCAATCTGGGGAA CGGAAAATTCGAGGATGTAACTGCCAAAGCAGGTGTCGCAGGTAATGGGGTGTTCGCTACCGGCGTGACCGTCGGCGATT ATGATAACGACGGCTACCTGGATATCTACGTCACCGGCTATGGCGGTAATCAACTCTTTCACAACCATGGCAACGGGACC TTCCGTGAGGTGACCGCCAGGGCCGGAGTGGGCGGCAGTGGGTGGAGCAGCAGCGCCGCCTGGGTGGATTACGATCGCGA CGGCTACCTGGATCTGTTTGTGGGACGCTACCTGGAGTACGACGTGCGCAAGGCGCCCTACTGCGGATATCACAAGCCTG GCTACCGCATGTACTGCGATCCGCAGCAGTTCGACGGGACGCCGGCATTGCTTTACCACAACAATCGGGATGGCACGTTT ACGGAGGTCTCCCGCAAAGCCGGCGTGGCGAATCCGGCGGGAAAGAGTTTGGGGGTGGCCATCGGCGATATCGATGGCGA TGGATGGCCCGATATCTTCGTGGCCAACGACGGCGTCCGCAATTTTCTCTACCGCAATAAAGGCAACGGCACATTTGACG ACATTACCTACGGAGCCGGCGTAGGTTTCGACATGAACGGCAAAGCTCTGGCCGGTATGGGTACCGAGATCGTGGATCTC GACGGCGATGGCTTACCCGACATCTTCTTTACGGCCTTTTCGGGCCAATATAACCCGCTCTTCCGCAACCTCGGCAAGCT GCTTTTTGAAGACATCACGGTCAAAGCCGGATTACCGTCCAGCGTGAAGACACTCGGCTTCGGCGCCAAGGTCTTCGACT TCGACAACGACGGTTACCCGGACATTTATGTCACCAACGGACACGTCACCGATAATGTGGCACTCTATGACCCGCAGCTT TCTTACCGTGAGTCCGACCTGCTTTACCGGAACCTCGGCGGCGGGCATTTTCGCGAAGTCTCGGCGGAAAGCGGCCCGAC GTTTCACATCAAGCACGTGGGCCGCGGCTTGGCGGTGGCGGATTTCGACAACGACGGCGACCTGGACATCGTGGTGAGCG ATTCCGGCGGGAGCCCGCTGCTGCTGCGCAATGATGGAGGCAATCGCAATCATTGGATCGCGCTCCGCGCCCGCGGCCGC GAGAGCAATTGGTTCGGGATCGGCGCGAAGGTGCGGGTGACCAGCGGCGACCGGACCCAGTTGCGGGAAGTCAATCCTTA CGGAAGTTACCTCAGCACCAGCGACACGCGTTTGTATTTCGGGCTGGGCAGCGCAACCCTCGCCCGCATCGAGATCGAGT GGCCCAGCGGGAAGAAGCAGGCGATCGACAGCGTTCGCGCCGGCCAGATTTTGCTGCTGGATGAGGCCAATGCTAAGGCC GACGCCAGGGCCGACAACGGGCGCTGA
Upstream 100 bases:
>100_bases TAATTTGGCTGAACCGTCGCCACCCGACGAACTGCCACCTTTAACCAAATTGACTACTACCCCGCGGAAGCGAGACAACC ACCGATATAATGGGACTCCG
Downstream 100 bases:
>100_bases AAGCCTCAGGTATAATCTGACCGTGCCGCTCCGGATTGCTGTTTTCCTCTGCGCTTCGGCCATGACTTGGGCGCAGACCC CTCGCCCCGATCTCCAGAGT
Product: ASPIC/UnbV domain-containing protein
Products: NA
Alternate protein names: FG-GAP Repeat Domain Protein; ASPIC/UnbV Domain Protein; FG-GAP Repeat-Containing Protein; ASPIC/UnbV; FG-GAP Repeat Protein; TPR Repeat-Containing Protein; PpiC-Type Peptidyl-Prolyl Cis-Trans Isomerase; Aspic/Unbv; Rhs Family Protein; Aspic/Unbv Domain Protein; FG-GAP Repeat- ASPIC/UnbV Domain-Containing Protein; Integrin-Like Protein; Secreted Protein Containing FG-GAP Repeats; Fg-Gap Repeat Protein; ASPIC And UnbV Domain Protein; FG-GAP Repeat Domain-Containing Protein; Fg-Gap Repeat/Aspic/Unbv Domain Protein; RTX Family Protein Exoprotein; Protein Tyrosine Kinase Family; FG-GAP Repeat Protein/ASPIC/UnbV Domain Protein; Acid Secreted Protein ASPIC
Number of amino acids: Translated: 568; Mature: 567
Protein sequence:
>568_residues MPLLRNVCLIFGANLLLFAVYSEQAARPAPREAGRVQLNEVAAASGITFRHENGASAEKYMFETFGSGVGVIDFDNDGLP DLFFANGADLAHGKPSPGNALYRNLGNGKFEDVTAKAGVAGNGVFATGVTVGDYDNDGYLDIYVTGYGGNQLFHNHGNGT FREVTARAGVGGSGWSSSAAWVDYDRDGYLDLFVGRYLEYDVRKAPYCGYHKPGYRMYCDPQQFDGTPALLYHNNRDGTF TEVSRKAGVANPAGKSLGVAIGDIDGDGWPDIFVANDGVRNFLYRNKGNGTFDDITYGAGVGFDMNGKALAGMGTEIVDL DGDGLPDIFFTAFSGQYNPLFRNLGKLLFEDITVKAGLPSSVKTLGFGAKVFDFDNDGYPDIYVTNGHVTDNVALYDPQL SYRESDLLYRNLGGGHFREVSAESGPTFHIKHVGRGLAVADFDNDGDLDIVVSDSGGSPLLLRNDGGNRNHWIALRARGR ESNWFGIGAKVRVTSGDRTQLREVNPYGSYLSTSDTRLYFGLGSATLARIEIEWPSGKKQAIDSVRAGQILLLDEANAKA DARADNGR
Sequences:
>Translated_568_residues MPLLRNVCLIFGANLLLFAVYSEQAARPAPREAGRVQLNEVAAASGITFRHENGASAEKYMFETFGSGVGVIDFDNDGLP DLFFANGADLAHGKPSPGNALYRNLGNGKFEDVTAKAGVAGNGVFATGVTVGDYDNDGYLDIYVTGYGGNQLFHNHGNGT FREVTARAGVGGSGWSSSAAWVDYDRDGYLDLFVGRYLEYDVRKAPYCGYHKPGYRMYCDPQQFDGTPALLYHNNRDGTF TEVSRKAGVANPAGKSLGVAIGDIDGDGWPDIFVANDGVRNFLYRNKGNGTFDDITYGAGVGFDMNGKALAGMGTEIVDL DGDGLPDIFFTAFSGQYNPLFRNLGKLLFEDITVKAGLPSSVKTLGFGAKVFDFDNDGYPDIYVTNGHVTDNVALYDPQL SYRESDLLYRNLGGGHFREVSAESGPTFHIKHVGRGLAVADFDNDGDLDIVVSDSGGSPLLLRNDGGNRNHWIALRARGR ESNWFGIGAKVRVTSGDRTQLREVNPYGSYLSTSDTRLYFGLGSATLARIEIEWPSGKKQAIDSVRAGQILLLDEANAKA DARADNGR >Mature_567_residues PLLRNVCLIFGANLLLFAVYSEQAARPAPREAGRVQLNEVAAASGITFRHENGASAEKYMFETFGSGVGVIDFDNDGLPD LFFANGADLAHGKPSPGNALYRNLGNGKFEDVTAKAGVAGNGVFATGVTVGDYDNDGYLDIYVTGYGGNQLFHNHGNGTF REVTARAGVGGSGWSSSAAWVDYDRDGYLDLFVGRYLEYDVRKAPYCGYHKPGYRMYCDPQQFDGTPALLYHNNRDGTFT EVSRKAGVANPAGKSLGVAIGDIDGDGWPDIFVANDGVRNFLYRNKGNGTFDDITYGAGVGFDMNGKALAGMGTEIVDLD GDGLPDIFFTAFSGQYNPLFRNLGKLLFEDITVKAGLPSSVKTLGFGAKVFDFDNDGYPDIYVTNGHVTDNVALYDPQLS YRESDLLYRNLGGGHFREVSAESGPTFHIKHVGRGLAVADFDNDGDLDIVVSDSGGSPLLLRNDGGNRNHWIALRARGRE SNWFGIGAKVRVTSGDRTQLREVNPYGSYLSTSDTRLYFGLGSATLARIEIEWPSGKKQAIDSVRAGQILLLDEANAKAD ARADNGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI47777317, Length=498, Percent_Identity=28.9156626506024, Blast_Score=118, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61281; Mature: 61150
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLLRNVCLIFGANLLLFAVYSEQAARPAPREAGRVQLNEVAAASGITFRHENGASAEKY CCHHHHHHHHHCCCEEEEEEEHHHCCCCCCCCCCCEEEEHHHHHCCEEEEECCCCCHHHH MFETFGSGVGVIDFDNDGLPDLFFANGADLAHGKPSPGNALYRNLGNGKFEDVTAKAGVA HHHHHCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCC GNGVFATGVTVGDYDNDGYLDIYVTGYGGNQLFHNHGNGTFREVTARAGVGGSGWSSSAA CCCEEEECEEEECCCCCCEEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCE WVDYDRDGYLDLFVGRYLEYDVRKAPYCGYHKPGYRMYCDPQQFDGTPALLYHNNRDGTF EEEECCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCEEEECHHHCCCCEEEEEECCCCCCH TEVSRKAGVANPAGKSLGVAIGDIDGDGWPDIFVANDGVRNFLYRNKGNGTFDDITYGAG HHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCHHHHEEECCCCCCCCCEEECCC VGFDMNGKALAGMGTEIVDLDGDGLPDIFFTAFSGQYNPLFRNLGKLLFEDITVKAGLPS CCCCCCCCEEECCCCEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHEEEECCCCC SVKTLGFGAKVFDFDNDGYPDIYVTNGHVTDNVALYDPQLSYRESDLLYRNLGGGHFREV CHHHHCCCEEEEECCCCCCCEEEEECCEEECCEEEECCCCCCCCCCEEEECCCCCCEEEE SAESGPTFHIKHVGRGLAVADFDNDGDLDIVVSDSGGSPLLLRNDGGNRNHWIALRARGR CCCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEEECCC ESNWFGIGAKVRVTSGDRTQLREVNPYGSYLSTSDTRLYFGLGSATLARIEIEWPSGKKQ CCCEEEECEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCHHH AIDSVRAGQILLLDEANAKADARADNGR HHHHCCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure PLLRNVCLIFGANLLLFAVYSEQAARPAPREAGRVQLNEVAAASGITFRHENGASAEKY CHHHHHHHHHCCCEEEEEEEHHHCCCCCCCCCCCEEEEHHHHHCCEEEEECCCCCHHHH MFETFGSGVGVIDFDNDGLPDLFFANGADLAHGKPSPGNALYRNLGNGKFEDVTAKAGVA HHHHHCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCC GNGVFATGVTVGDYDNDGYLDIYVTGYGGNQLFHNHGNGTFREVTARAGVGGSGWSSSAA CCCEEEECEEEECCCCCCEEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCE WVDYDRDGYLDLFVGRYLEYDVRKAPYCGYHKPGYRMYCDPQQFDGTPALLYHNNRDGTF EEEECCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCEEEECHHHCCCCEEEEEECCCCCCH TEVSRKAGVANPAGKSLGVAIGDIDGDGWPDIFVANDGVRNFLYRNKGNGTFDDITYGAG HHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCHHHHEEECCCCCCCCCEEECCC VGFDMNGKALAGMGTEIVDLDGDGLPDIFFTAFSGQYNPLFRNLGKLLFEDITVKAGLPS CCCCCCCCEEECCCCEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHEEEECCCCC SVKTLGFGAKVFDFDNDGYPDIYVTNGHVTDNVALYDPQLSYRESDLLYRNLGGGHFREV CHHHHCCCEEEEECCCCCCCEEEEECCEEECCEEEECCCCCCCCCCEEEECCCCCCEEEE SAESGPTFHIKHVGRGLAVADFDNDGDLDIVVSDSGGSPLLLRNDGGNRNHWIALRARGR CCCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEEECCC ESNWFGIGAKVRVTSGDRTQLREVNPYGSYLSTSDTRLYFGLGSATLARIEIEWPSGKKQ CCCEEEECEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCHHH AIDSVRAGQILLLDEANAKADARADNGR HHHHCCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA