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The map label for this gene is ybiT [H]

Identifier: 116621043

GI number: 116621043

Start: 2388104

End: 2389705

Strand: Reverse

Name: ybiT [H]

Synonym: Acid_1924

Alternate gene names: 116621043

Gene position: 2389705-2388104 (Counterclockwise)

Preceding gene: 116621044

Following gene: 116621037

Centisome position: 23.98

GC content: 61.67

Gene sequence:

>1602_bases
ATGCGCTTTGGCGCCCGAATACTGTTCGAAGACGTCGCCTGCTCGTTTTTGCCAGGCCGTCGCTATGCCCTCACCGGGCC
GAACGGCGCGGGCAAGTCTACCTTGATGAAGATCCTCACCGGCGAAATCGAGCCGGCGCTGGGTACCGTGACGCGTCCCA
AGAAACTCGGCGTCCTCCGGCAGGATCAGTTTGCCTTCGATCAGTTCCGCGTGATCGATACCGTCATCATGGGCAACGCG
CCCCTCTGGAAGGCGCTTGAGGAACGCGACAAGCTCTACGCCAAACCCCACGACCAGCTCACCGACGAAGATGGCATGCG
CCTCGGTGAACTCGAAGGCATCGTCGGCGAACAGGATGGCTACACCGCCGAGTCCGATGCCGCCGTCCTCCTCGATGGCC
TCGGCGTCCCCGATTCCCTGCACGAGCGCCTCATGGGCGAACTCCAGGGCGGCCAGAAGGTCCGTGTGCTCCTCGCCCAA
GCCCTCTTCGGCACGCCGCCCGCCCTCCTCCTCGACGAGCCCACCAACCACCTCGATCTCGATTCGGTCCACTGGCTCCA
GGACTATCTCATCCACTATCAGGGCGCGCTCATCGTCATCTCGCACGATCGCCACTTCCTCAACTCCGTCTGCACCCACG
TCGCCGATATCGACTACGAAACCGTCATCCTTTACACCGGCGGCTACGACGACATGGTCCTGGCCAAAACCCAGATCCGC
TCGCGCATCGAAGCCCAGAATCAGCAGCGCGAAAAGAAGATCGCTCAGCTCAACGAATTCATCGCACGCTTTTCCGCCGG
CACCCGCTCCAGCCAGGTCACTTCCCGCAAGAAGGAAGTCGAGCGTCTGCAAACTTCCGAACTCGCGCGCAGCAACATTC
AGCGGCCCTACATCAAGTTCGAATCCAAGCGCCCCTCCGGCCGCCATCCGCTGGAGTTCAAGGCGATCTCGAAATCATAC
GGCGATCTGAAGGTGATCGATAACTTCACCGCCAGCCTCTCGCGCGGCGAAAAAATCGCGCTCATGGGCCGCAACGGCGT
CGGCAAGACCACCCTGCTCAAATCCCTCGTCCGCAACGCAACCGGCTTTGTCGAGGATTCCGATCGCGCCTTTGAGATCG
ATGGCGGCGCCGTTACCTGGGGCCACGAAGTTTCCGTCGGCTACTTCGCGCAGGACCACACCGATTCCATCGCCAAGGGC
ATGACCACCATCGAGTGGCTGCACCAGTGGGATCCCGCCGCCTCCCAGGAAGAACTGCGCGGCCTGCTCGGCCAGATGCT
CTTCTCCGGCGACGACGCGCTCAAACCCACCAGCGCCCTCTCCGGCGGCGAGTCCGCCCGCATCATCTTCTGCCGCCTCA
TGCTGCAGAAGCCCAACTTCCTGGTTCTCGACGAACCCACCAACCACCTGGATCTCGAGTCCATCAACGCCCTGAATATC
GCGCTGCAGAAGTACGAAGGCACCGTGCTGCTGGTCACCCACGATCACGATTTGATCGATGAAGTGGCCACCCGCATCTG
GCACTTCGAAGGCGGCAAAATCGAGGATTTCAAAGGCCCCTACTCCGAGTACGTGGCCTACGCCCAGGAAAAAGCCTCGT
AG

Upstream 100 bases:

>100_bases
AAATTGCAGCACTCCAATTGTAATCGCTCCCGCCGCAAGCGTCAAACCCGCACCTGCGGTATCATAGTAGTTACCCTTGC
TTTCCCTTAACAACATCTCC

Downstream 100 bases:

>100_bases
TCCCGACTTGTATTACACTGCTCTTGTTTGCTCGCAGCCGCAACATCCGCCCCGGAATATTCGCCGCCATCAGAGCCTCG
ACCGTAAGGGAGCGTCCGTT

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MRFGARILFEDVACSFLPGRRYALTGPNGAGKSTLMKILTGEIEPALGTVTRPKKLGVLRQDQFAFDQFRVIDTVIMGNA
PLWKALEERDKLYAKPHDQLTDEDGMRLGELEGIVGEQDGYTAESDAAVLLDGLGVPDSLHERLMGELQGGQKVRVLLAQ
ALFGTPPALLLDEPTNHLDLDSVHWLQDYLIHYQGALIVISHDRHFLNSVCTHVADIDYETVILYTGGYDDMVLAKTQIR
SRIEAQNQQREKKIAQLNEFIARFSAGTRSSQVTSRKKEVERLQTSELARSNIQRPYIKFESKRPSGRHPLEFKAISKSY
GDLKVIDNFTASLSRGEKIALMGRNGVGKTTLLKSLVRNATGFVEDSDRAFEIDGGAVTWGHEVSVGYFAQDHTDSIAKG
MTTIEWLHQWDPAASQEELRGLLGQMLFSGDDALKPTSALSGGESARIIFCRLMLQKPNFLVLDEPTNHLDLESINALNI
ALQKYEGTVLLVTHDHDLIDEVATRIWHFEGGKIEDFKGPYSEYVAYAQEKAS

Sequences:

>Translated_533_residues
MRFGARILFEDVACSFLPGRRYALTGPNGAGKSTLMKILTGEIEPALGTVTRPKKLGVLRQDQFAFDQFRVIDTVIMGNA
PLWKALEERDKLYAKPHDQLTDEDGMRLGELEGIVGEQDGYTAESDAAVLLDGLGVPDSLHERLMGELQGGQKVRVLLAQ
ALFGTPPALLLDEPTNHLDLDSVHWLQDYLIHYQGALIVISHDRHFLNSVCTHVADIDYETVILYTGGYDDMVLAKTQIR
SRIEAQNQQREKKIAQLNEFIARFSAGTRSSQVTSRKKEVERLQTSELARSNIQRPYIKFESKRPSGRHPLEFKAISKSY
GDLKVIDNFTASLSRGEKIALMGRNGVGKTTLLKSLVRNATGFVEDSDRAFEIDGGAVTWGHEVSVGYFAQDHTDSIAKG
MTTIEWLHQWDPAASQEELRGLLGQMLFSGDDALKPTSALSGGESARIIFCRLMLQKPNFLVLDEPTNHLDLESINALNI
ALQKYEGTVLLVTHDHDLIDEVATRIWHFEGGKIEDFKGPYSEYVAYAQEKAS
>Mature_533_residues
MRFGARILFEDVACSFLPGRRYALTGPNGAGKSTLMKILTGEIEPALGTVTRPKKLGVLRQDQFAFDQFRVIDTVIMGNA
PLWKALEERDKLYAKPHDQLTDEDGMRLGELEGIVGEQDGYTAESDAAVLLDGLGVPDSLHERLMGELQGGQKVRVLLAQ
ALFGTPPALLLDEPTNHLDLDSVHWLQDYLIHYQGALIVISHDRHFLNSVCTHVADIDYETVILYTGGYDDMVLAKTQIR
SRIEAQNQQREKKIAQLNEFIARFSAGTRSSQVTSRKKEVERLQTSELARSNIQRPYIKFESKRPSGRHPLEFKAISKSY
GDLKVIDNFTASLSRGEKIALMGRNGVGKTTLLKSLVRNATGFVEDSDRAFEIDGGAVTWGHEVSVGYFAQDHTDSIAKG
MTTIEWLHQWDPAASQEELRGLLGQMLFSGDDALKPTSALSGGESARIIFCRLMLQKPNFLVLDEPTNHLDLESINALNI
ALQKYEGTVLLVTHDHDLIDEVATRIWHFEGGKIEDFKGPYSEYVAYAQEKAS

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=540, Percent_Identity=31.6666666666667, Blast_Score=252, Evalue=6e-67,
Organism=Homo sapiens, GI27881506, Length=546, Percent_Identity=30.7692307692308, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI10947137, Length=546, Percent_Identity=30.7692307692308, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI10947135, Length=538, Percent_Identity=29.9256505576208, Blast_Score=205, Evalue=1e-52,
Organism=Homo sapiens, GI69354671, Length=538, Percent_Identity=29.9256505576208, Blast_Score=204, Evalue=1e-52,
Organism=Escherichia coli, GI1787041, Length=529, Percent_Identity=45.5576559546314, Blast_Score=499, Evalue=1e-142,
Organism=Escherichia coli, GI1789751, Length=532, Percent_Identity=34.0225563909774, Blast_Score=295, Evalue=7e-81,
Organism=Escherichia coli, GI2367384, Length=534, Percent_Identity=31.2734082397004, Blast_Score=238, Evalue=8e-64,
Organism=Escherichia coli, GI1787182, Length=556, Percent_Identity=31.8345323741007, Blast_Score=229, Evalue=4e-61,
Organism=Escherichia coli, GI1787712, Length=233, Percent_Identity=27.4678111587983, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1788761, Length=224, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1788165, Length=224, Percent_Identity=26.7857142857143, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1788450, Length=223, Percent_Identity=25.1121076233184, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI87081709, Length=213, Percent_Identity=25.3521126760563, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=530, Percent_Identity=33.0188679245283, Blast_Score=234, Evalue=6e-62,
Organism=Caenorhabditis elegans, GI17559834, Length=538, Percent_Identity=28.6245353159851, Blast_Score=221, Evalue=5e-58,
Organism=Caenorhabditis elegans, GI17555318, Length=513, Percent_Identity=28.4600389863548, Blast_Score=221, Evalue=7e-58,
Organism=Saccharomyces cerevisiae, GI6321121, Length=561, Percent_Identity=31.1942959001783, Blast_Score=230, Evalue=3e-61,
Organism=Saccharomyces cerevisiae, GI6320874, Length=537, Percent_Identity=30.7262569832402, Blast_Score=223, Evalue=5e-59,
Organism=Saccharomyces cerevisiae, GI6324314, Length=359, Percent_Identity=27.0194986072423, Blast_Score=100, Evalue=9e-22,
Organism=Saccharomyces cerevisiae, GI6323278, Length=358, Percent_Identity=26.8156424581006, Blast_Score=95, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6325030, Length=297, Percent_Identity=25.5892255892256, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24666836, Length=534, Percent_Identity=30.1498127340824, Blast_Score=245, Evalue=6e-65,
Organism=Drosophila melanogaster, GI24642252, Length=543, Percent_Identity=29.2817679558011, Blast_Score=221, Evalue=9e-58,
Organism=Drosophila melanogaster, GI18859989, Length=543, Percent_Identity=29.2817679558011, Blast_Score=221, Evalue=9e-58,
Organism=Drosophila melanogaster, GI24641342, Length=541, Percent_Identity=30.6839186691312, Blast_Score=211, Evalue=8e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59391; Mature: 59391

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFGARILFEDVACSFLPGRRYALTGPNGAGKSTLMKILTGEIEPALGTVTRPKKLGVLR
CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCC
QDQFAFDQFRVIDTVIMGNAPLWKALEERDKLYAKPHDQLTDEDGMRLGELEGIVGEQDG
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHCCCCCCCCC
YTAESDAAVLLDGLGVPDSLHERLMGELQGGQKVRVLLAQALFGTPPALLLDEPTNHLDL
CCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCC
DSVHWLQDYLIHYQGALIVISHDRHFLNSVCTHVADIDYETVILYTGGYDDMVLAKTQIR
CHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHH
SRIEAQNQQREKKIAQLNEFIARFSAGTRSSQVTSRKKEVERLQTSELARSNIQRPYIKF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
ESKRPSGRHPLEFKAISKSYGDLKVIDNFTASLSRGEKIALMGRNGVGKTTLLKSLVRNA
ECCCCCCCCCEEEEEHHCCCCCEEEEHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHH
TGFVEDSDRAFEIDGGAVTWGHEVSVGYFAQDHTDSIAKGMTTIEWLHQWDPAASQEELR
CCCCCCCCCEEEECCCEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
GLLGQMLFSGDDALKPTSALSGGESARIIFCRLMLQKPNFLVLDEPTNHLDLESINALNI
HHHHHHHHCCCCCCCCCHHCCCCCCHHEEEEEHHHCCCCEEEEECCCCCCCHHHCCHHHE
ALQKYEGTVLLVTHDHDLIDEVATRIWHFEGGKIEDFKGPYSEYVAYAQEKAS
EEEECCCEEEEEECCHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRFGARILFEDVACSFLPGRRYALTGPNGAGKSTLMKILTGEIEPALGTVTRPKKLGVLR
CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCC
QDQFAFDQFRVIDTVIMGNAPLWKALEERDKLYAKPHDQLTDEDGMRLGELEGIVGEQDG
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHCCCCCCCCC
YTAESDAAVLLDGLGVPDSLHERLMGELQGGQKVRVLLAQALFGTPPALLLDEPTNHLDL
CCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCC
DSVHWLQDYLIHYQGALIVISHDRHFLNSVCTHVADIDYETVILYTGGYDDMVLAKTQIR
CHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHH
SRIEAQNQQREKKIAQLNEFIARFSAGTRSSQVTSRKKEVERLQTSELARSNIQRPYIKF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
ESKRPSGRHPLEFKAISKSYGDLKVIDNFTASLSRGEKIALMGRNGVGKTTLLKSLVRNA
ECCCCCCCCCEEEEEHHCCCCCEEEEHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHH
TGFVEDSDRAFEIDGGAVTWGHEVSVGYFAQDHTDSIAKGMTTIEWLHQWDPAASQEELR
CCCCCCCCCEEEECCCEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
GLLGQMLFSGDDALKPTSALSGGESARIIFCRLMLQKPNFLVLDEPTNHLDLESINALNI
HHHHHHHHCCCCCCCCCHHCCCCCCHHEEEEEHHHCCCCEEEEECCCCCCCHHHCCHHHE
ALQKYEGTVLLVTHDHDLIDEVATRIWHFEGGKIEDFKGPYSEYVAYAQEKAS
EEEECCCEEEEEECCHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]