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The map label for this gene is 116621024

Identifier: 116621024

GI number: 116621024

Start: 2362846

End: 2365539

Strand: Direct

Name: 116621024

Synonym: Acid_1905

Alternate gene names: NA

Gene position: 2362846-2365539 (Clockwise)

Preceding gene: 116621023

Following gene: 116621025

Centisome position: 23.71

GC content: 65.0

Gene sequence:

>2694_bases
GTGCGATTGTTATCGGGAGCCGCCGGATCTGGTAAAACAACGTATGTTTTAGCACGTTTCCGCGAAGCCCTCGCCACAGG
TAACACTTCCGTGCGGTTGCTGGTTCCCACGGCGACCATGGCGCAGCATCTGCAGAACCGGCTGGCGCGCGAGGGATTTG
TCTTTCGCCGCGGCCAGATTCAAACGCTTTCCGGATTCCTCCGGCCATGGACCACCGACTTGCCGGAGGTCTCCCCGCCG
GTCCTCCACTTATTGGTGGAACAGGCGGCGCGACGCGTGGCGCGGCCGGAGTTCGAGCGCGTCACGCAGTTCCATGGATT
CTGCGCGTCCCTCGCAAAAACGATCGCGGAGTTCGCCTCGGCGGGGTGCGATAGCGCGCGCCTGGCCGCGAACCTGCCCG
AGGTTCCGCTGGGCGGCGCGTTCCTCGCCGTCTACGAGGAAGTCGATCGCGAACTCCGCCGCCGCGGATTGGCACTGCGC
GGGCGCATACTCACGGCCGCTGCGGAGCGCATCGAAGCGGGCGGGTTGCCAGGGATTGCGACCATCTGGCTGGACGGCTT
TCACGCGCTTCCCGACCCCGAGCTCAGCGTGATCGCGGCATTGGGGAAGCACGCGGACCTCACTCTGACTCTCGATGAGG
CCGAACTCGGCGAGGCCACGCTGGCACGGCTGGGCGCCTTGGATTTCAGCGAGGAGCAAGTCCGCGGAACGCGCACGCGA
AACGCACTGGCTTTGATCAAAGCGCCGGGCATCGAGCGCGAGGTCGAGGAGATCGCGCGGCGCATTCTGCGGCAGGTCGA
GGGGCGGCCGTTCCGCGAGATCGGCGTGATCGTGCGCGCACCGGAGATCTATGCGCCTATCCTGCGCGCTACCCTCGATC
GGTTCGGCATCCCCGCGCGATTTTACTTCGACGAAAAGCTGGAGCGGCATCCGGTGATCCGCTTTCTGGCCGGCGCGATG
GATGCGATGCTCGGAGGTTGGGAACACGGCGCCACGCTGGCGGTGCTGCGCCTGGCGCCGCGCTTCGCCGATTTCGGAGT
GATGGATCGCTTCGATTTCGACGTCCGCGAACGCATTCCCCGTTCGGGCCTGGGGGAGTTGCGCTCCCTGTTGATCGATG
AGGACGGCCAGCCCCGGCCTTACGCCGAGCGCCTGCTGCATAAGATCGATTCGCTGGCGGCGCTGGAGGAATGGCGCGCG
TTGGAACTCGCGCCCAGGGATTGGGCGGCGCGGTTCGCCACGCTGCGCGAGATCTTCAAGCCCGCTCGACCGGCCGATGA
GATTACGCACGAGCTCGCGCTGCAGTATCGCAGCCAGGCGGCGGTGCTTGATTTATTCGACGAGGCGCTCGATGAGGCCG
CGCAGGCGCTGCACGGCATCCGCCACCTGCCGCTCGAAGACTACTGGCGCGCGGTGAAAAGTATTCTGCGGCTCAAGCCG
CTGCGGCTGGAGGACGGTCGCCGCAACGTAGTTCACGTCATGAGCGCGCACGAGGCACGACAGTGGGTGCTGCCGGTGGT
CTTCGTCTGCGGGATGGTGGAGAAGCAGTTCCCCAAGTTTCACCAGCAGGATCCATTCTTCGGCGACGCCGCGCGGTGCC
GGCTCAACGGCTCCGGGATCCGGGTGCGGACGGCCGCCGAGTTCGAGCGCGAGGAGCGCATGCTGTTCGACGCGGCAATC
ACGCGCGCGACCATGTTGGCGACGCTGTCGTATCCGGAGTTCGATGGCCGCGGCGAACGGAATCTGCCGTCGATCTACCT
GGAAGACCTCGATCTGCCGGCGGAGGATGCGGTGGCGGTGCGGCCGGCGCCGCGCGCGCGGACCGGCGACTCCGCGCCAG
TGGAGATCCGCAATGCGCAATTGCTCGAGTACATGCGTCACAGGACGGCGCAGCTTTCGCCGACCGCCCTCGAGACTTTC
CTGCAGTGCCCCTTCCAATACTTCACCCAGCGATTCCTGCGCCTGAAGACGGCCCCCGACCGTCCCGAGCAGCGGCTGGA
TTTTCTAACGCAGGGGAACGTCGTACACGCGGTGCTGGCAGAGTGGTGGCTCGAGCCGCAGGATCTGGCGGCGTTGTTCG
AGCGCGTGTTTGCCGCGCAATTGAAAGAGAAGTGCATTCCGCCGGGGTACCACACGGAGCGGCTGCGCAACGCCATGCTC
GACGATTTGCGGCGGTTCACTTCGGAAGATCCATGGCCGAAGATCGCGTTCCGGTCGCAAATCGAAACGAAATTCTGCTT
TCCGCTGGACGATACCGTCGAGATTAACGGCCGCATTGACCGGTTGGACACCGCACCTGATGGACGGACCTTCGTGATCG
ATTACAAGTACAGCGCGGCCCAGCGCGTGAAAGATAAGTTGAAGGACGCGAGCCTGCTGCAGGCGCCGCTTTATATGTTG
GCCGCCCAGCACCTGAATCTGGACGCAGCCGGGATGTACTACGTCGGTGTGAAGGGCGGTATCGAGTACGCGGGGTGGAG
CGATCATCCGCTGCTGGAGAGCCTCGGGGTGCCGGAAAACTGGTTCGACATTACGCGGCAGCGGACCTTGGAGATCGTCC
GCCAGATTCGTTCGGGACGGGTAGAAGTCCATCCGGCCGATCGCGAGAGCTGCCGCTTCTGCGATTCCAAGGACATCTGC
CGCGTCGAGACGCAGCCGGCAGCGGCCCTGGTTCAATTGGCGGAGGGCTCATGA

Upstream 100 bases:

>100_bases
GCAACGAACAAGTTATTTCCCCAACTAACGGCACAACTGCGCCTGCCGAAACCCGTTAAACATCGACCCATTTTCGACTT
TTCTTCGCTACACTGAATAG

Downstream 100 bases:

>100_bases
GCTGTTGTCTTGCTCTGTGGGGCAGGCAATCCTGCCTGCAGCCGCCTTTCAGGCGGCTTCCGTCATCTGCGGAGGGTGCA
TGAGCGCGATTCCATTCACA

Product: ATP-dependent nuclease subunit B-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 897; Mature: 897

Protein sequence:

>897_residues
MRLLSGAAGSGKTTYVLARFREALATGNTSVRLLVPTATMAQHLQNRLAREGFVFRRGQIQTLSGFLRPWTTDLPEVSPP
VLHLLVEQAARRVARPEFERVTQFHGFCASLAKTIAEFASAGCDSARLAANLPEVPLGGAFLAVYEEVDRELRRRGLALR
GRILTAAAERIEAGGLPGIATIWLDGFHALPDPELSVIAALGKHADLTLTLDEAELGEATLARLGALDFSEEQVRGTRTR
NALALIKAPGIEREVEEIARRILRQVEGRPFREIGVIVRAPEIYAPILRATLDRFGIPARFYFDEKLERHPVIRFLAGAM
DAMLGGWEHGATLAVLRLAPRFADFGVMDRFDFDVRERIPRSGLGELRSLLIDEDGQPRPYAERLLHKIDSLAALEEWRA
LELAPRDWAARFATLREIFKPARPADEITHELALQYRSQAAVLDLFDEALDEAAQALHGIRHLPLEDYWRAVKSILRLKP
LRLEDGRRNVVHVMSAHEARQWVLPVVFVCGMVEKQFPKFHQQDPFFGDAARCRLNGSGIRVRTAAEFEREERMLFDAAI
TRATMLATLSYPEFDGRGERNLPSIYLEDLDLPAEDAVAVRPAPRARTGDSAPVEIRNAQLLEYMRHRTAQLSPTALETF
LQCPFQYFTQRFLRLKTAPDRPEQRLDFLTQGNVVHAVLAEWWLEPQDLAALFERVFAAQLKEKCIPPGYHTERLRNAML
DDLRRFTSEDPWPKIAFRSQIETKFCFPLDDTVEINGRIDRLDTAPDGRTFVIDYKYSAAQRVKDKLKDASLLQAPLYML
AAQHLNLDAAGMYYVGVKGGIEYAGWSDHPLLESLGVPENWFDITRQRTLEIVRQIRSGRVEVHPADRESCRFCDSKDIC
RVETQPAAALVQLAEGS

Sequences:

>Translated_897_residues
MRLLSGAAGSGKTTYVLARFREALATGNTSVRLLVPTATMAQHLQNRLAREGFVFRRGQIQTLSGFLRPWTTDLPEVSPP
VLHLLVEQAARRVARPEFERVTQFHGFCASLAKTIAEFASAGCDSARLAANLPEVPLGGAFLAVYEEVDRELRRRGLALR
GRILTAAAERIEAGGLPGIATIWLDGFHALPDPELSVIAALGKHADLTLTLDEAELGEATLARLGALDFSEEQVRGTRTR
NALALIKAPGIEREVEEIARRILRQVEGRPFREIGVIVRAPEIYAPILRATLDRFGIPARFYFDEKLERHPVIRFLAGAM
DAMLGGWEHGATLAVLRLAPRFADFGVMDRFDFDVRERIPRSGLGELRSLLIDEDGQPRPYAERLLHKIDSLAALEEWRA
LELAPRDWAARFATLREIFKPARPADEITHELALQYRSQAAVLDLFDEALDEAAQALHGIRHLPLEDYWRAVKSILRLKP
LRLEDGRRNVVHVMSAHEARQWVLPVVFVCGMVEKQFPKFHQQDPFFGDAARCRLNGSGIRVRTAAEFEREERMLFDAAI
TRATMLATLSYPEFDGRGERNLPSIYLEDLDLPAEDAVAVRPAPRARTGDSAPVEIRNAQLLEYMRHRTAQLSPTALETF
LQCPFQYFTQRFLRLKTAPDRPEQRLDFLTQGNVVHAVLAEWWLEPQDLAALFERVFAAQLKEKCIPPGYHTERLRNAML
DDLRRFTSEDPWPKIAFRSQIETKFCFPLDDTVEINGRIDRLDTAPDGRTFVIDYKYSAAQRVKDKLKDASLLQAPLYML
AAQHLNLDAAGMYYVGVKGGIEYAGWSDHPLLESLGVPENWFDITRQRTLEIVRQIRSGRVEVHPADRESCRFCDSKDIC
RVETQPAAALVQLAEGS
>Mature_897_residues
MRLLSGAAGSGKTTYVLARFREALATGNTSVRLLVPTATMAQHLQNRLAREGFVFRRGQIQTLSGFLRPWTTDLPEVSPP
VLHLLVEQAARRVARPEFERVTQFHGFCASLAKTIAEFASAGCDSARLAANLPEVPLGGAFLAVYEEVDRELRRRGLALR
GRILTAAAERIEAGGLPGIATIWLDGFHALPDPELSVIAALGKHADLTLTLDEAELGEATLARLGALDFSEEQVRGTRTR
NALALIKAPGIEREVEEIARRILRQVEGRPFREIGVIVRAPEIYAPILRATLDRFGIPARFYFDEKLERHPVIRFLAGAM
DAMLGGWEHGATLAVLRLAPRFADFGVMDRFDFDVRERIPRSGLGELRSLLIDEDGQPRPYAERLLHKIDSLAALEEWRA
LELAPRDWAARFATLREIFKPARPADEITHELALQYRSQAAVLDLFDEALDEAAQALHGIRHLPLEDYWRAVKSILRLKP
LRLEDGRRNVVHVMSAHEARQWVLPVVFVCGMVEKQFPKFHQQDPFFGDAARCRLNGSGIRVRTAAEFEREERMLFDAAI
TRATMLATLSYPEFDGRGERNLPSIYLEDLDLPAEDAVAVRPAPRARTGDSAPVEIRNAQLLEYMRHRTAQLSPTALETF
LQCPFQYFTQRFLRLKTAPDRPEQRLDFLTQGNVVHAVLAEWWLEPQDLAALFERVFAAQLKEKCIPPGYHTERLRNAML
DDLRRFTSEDPWPKIAFRSQIETKFCFPLDDTVEINGRIDRLDTAPDGRTFVIDYKYSAAQRVKDKLKDASLLQAPLYML
AAQHLNLDAAGMYYVGVKGGIEYAGWSDHPLLESLGVPENWFDITRQRTLEIVRQIRSGRVEVHPADRESCRFCDSKDIC
RVETQPAAALVQLAEGS

Specific function: Unknown

COG id: COG2887

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 101130; Mature: 101130

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS00251 TNF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLSGAAGSGKTTYVLARFREALATGNTSVRLLVPTATMAQHLQNRLAREGFVFRRGQI
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCEEECCCH
QTLSGFLRPWTTDLPEVSPPVLHLLVEQAARRVARPEFERVTQFHGFCASLAKTIAEFAS
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGCDSARLAANLPEVPLGGAFLAVYEEVDRELRRRGLALRGRILTAAAERIEAGGLPGIA
CCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHH
TIWLDGFHALPDPELSVIAALGKHADLTLTLDEAELGEATLARLGALDFSEEQVRGTRTR
HHHCCCCCCCCCCHHHHHHHHCCCCCEEEEECCHHHCHHHHHHHHCCCCCHHHHHHHHCC
NALALIKAPGIEREVEEIARRILRQVEGRPFREIGVIVRAPEIYAPILRATLDRFGIPAR
CCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHCEEEECCHHHHHHHHHHHHHHCCCEE
FYFDEKLERHPVIRFLAGAMDAMLGGWEHGATLAVLRLAPRFADFGVMDRFDFDVRERIP
EHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCC
RSGLGELRSLLIDEDGQPRPYAERLLHKIDSLAALEEWRALELAPRDWAARFATLREIFK
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
PARPADEITHELALQYRSQAAVLDLFDEALDEAAQALHGIRHLPLEDYWRAVKSILRLKP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
LRLEDGRRNVVHVMSAHEARQWVLPVVFVCGMVEKQFPKFHQQDPFFGDAARCRLNGSGI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCEEEECCCCE
RVRTAAEFEREERMLFDAAITRATMLATLSYPEFDGRGERNLPSIYLEDLDLPAEDAVAV
EEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHCCCCCCCCCEEE
RPAPRARTGDSAPVEIRNAQLLEYMRHRTAQLSPTALETFLQCPFQYFTQRFLRLKTAPD
CCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCC
RPEQRLDFLTQGNVVHAVLAEWWLEPQDLAALFERVFAAQLKEKCIPPGYHTERLRNAML
CHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
DDLRRFTSEDPWPKIAFRSQIETKFCFPLDDTVEINGRIDRLDTAPDGRTFVIDYKYSAA
HHHHHHCCCCCCCCHHHHHCCCCEEECCCCCCEEECCCEEECCCCCCCCEEEEEECHHHH
QRVKDKLKDASLLQAPLYMLAAQHLNLDAAGMYYVGVKGGIEYAGWSDHPLLESLGVPEN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCHH
WFDITRQRTLEIVRQIRSGRVEVHPADRESCRFCDSKDICRVETQPAAALVQLAEGS
HHHHHHHHHHHHHHHHHCCCEEECCCCCHHHCCCCCCCCEEECCCHHHHHHHHCCCC
>Mature Secondary Structure
MRLLSGAAGSGKTTYVLARFREALATGNTSVRLLVPTATMAQHLQNRLAREGFVFRRGQI
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCEEECCCH
QTLSGFLRPWTTDLPEVSPPVLHLLVEQAARRVARPEFERVTQFHGFCASLAKTIAEFAS
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGCDSARLAANLPEVPLGGAFLAVYEEVDRELRRRGLALRGRILTAAAERIEAGGLPGIA
CCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHH
TIWLDGFHALPDPELSVIAALGKHADLTLTLDEAELGEATLARLGALDFSEEQVRGTRTR
HHHCCCCCCCCCCHHHHHHHHCCCCCEEEEECCHHHCHHHHHHHHCCCCCHHHHHHHHCC
NALALIKAPGIEREVEEIARRILRQVEGRPFREIGVIVRAPEIYAPILRATLDRFGIPAR
CCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHCEEEECCHHHHHHHHHHHHHHCCCEE
FYFDEKLERHPVIRFLAGAMDAMLGGWEHGATLAVLRLAPRFADFGVMDRFDFDVRERIP
EHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCC
RSGLGELRSLLIDEDGQPRPYAERLLHKIDSLAALEEWRALELAPRDWAARFATLREIFK
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
PARPADEITHELALQYRSQAAVLDLFDEALDEAAQALHGIRHLPLEDYWRAVKSILRLKP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
LRLEDGRRNVVHVMSAHEARQWVLPVVFVCGMVEKQFPKFHQQDPFFGDAARCRLNGSGI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCEEEECCCCE
RVRTAAEFEREERMLFDAAITRATMLATLSYPEFDGRGERNLPSIYLEDLDLPAEDAVAV
EEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHCCCCCCCCCEEE
RPAPRARTGDSAPVEIRNAQLLEYMRHRTAQLSPTALETFLQCPFQYFTQRFLRLKTAPD
CCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCC
RPEQRLDFLTQGNVVHAVLAEWWLEPQDLAALFERVFAAQLKEKCIPPGYHTERLRNAML
CHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
DDLRRFTSEDPWPKIAFRSQIETKFCFPLDDTVEINGRIDRLDTAPDGRTFVIDYKYSAA
HHHHHHCCCCCCCCHHHHHCCCCEEECCCCCCEEECCCEEECCCCCCCCEEEEEECHHHH
QRVKDKLKDASLLQAPLYMLAAQHLNLDAAGMYYVGVKGGIEYAGWSDHPLLESLGVPEN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCHH
WFDITRQRTLEIVRQIRSGRVEVHPADRESCRFCDSKDICRVETQPAAALVQLAEGS
HHHHHHHHHHHHHHHHHCCCEEECCCCCHHHCCCCCCCCEEECCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA