| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620993
Identifier: 116620993
GI number: 116620993
Start: 2332913
End: 2333425
Strand: Reverse
Name: 116620993
Synonym: Acid_1874
Alternate gene names: NA
Gene position: 2333425-2332913 (Counterclockwise)
Preceding gene: 116620995
Following gene: 116620992
Centisome position: 23.41
GC content: 59.45
Gene sequence:
>513_bases ATGGGATCGGAAAGACTCTGCGCCGCGTTGCTGGCGAAAATCCACGAACAGATTGAGGGGACCGTACACCTCATCAGCGC CGTTCCCGCCGATCGCCTGAATTGGACGCCCGCGATTCCAGGCGCCTGGCCAGTAGATATCCTGCTCGGCCATCTTCTGG AATGTCTCGCCGGATTCTGCGCCGTGTTGTCCGCGGTCGAACCGAAGCGGCTGGCGCACTTCTCGGAGCTCCGAGCTCTC CCGGTGAATCACGCGTGCTCACCGGGCGATGCGATACGCCGGATTGCCCTTTATCGAACACGCATCGACGAAGGCTTCGC GTTGCTGGTGGATGCCAGTCTCTGCAAATCGGTTTCCACCGTCTTTGTGCGCGAGGGCGAACCGTTGCTGACGCTGCTGT TGGGCAACCTGGAGCATCTGGTCAACCACAAGCACCAGTTGTTCACGTATCTACGACAACTGGGAGTTGATGTGACCACG CGCGATCTTTACCAGTTTCGCGGAGACGTGTGA
Upstream 100 bases:
>100_bases AGCCGGGCGACGGACACAGACATGGTGTTCGCCGCGCTGACCCCGGCGGATACCGAGCTGCTCGAACGGGCGCATATGAA ATGTGACACTGAAAGGCACG
Downstream 100 bases:
>100_bases CTTGAGTCCGGGCGCTTCGCCTTCAAGCGAGCGCACCGGTAGCCGTGCCGCCCGGCACTTTCACTATCGGCGCAGACCCA ACGTACGACCCCTCTCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MGSERLCAALLAKIHEQIEGTVHLISAVPADRLNWTPAIPGAWPVDILLGHLLECLAGFCAVLSAVEPKRLAHFSELRAL PVNHACSPGDAIRRIALYRTRIDEGFALLVDASLCKSVSTVFVREGEPLLTLLLGNLEHLVNHKHQLFTYLRQLGVDVTT RDLYQFRGDV
Sequences:
>Translated_170_residues MGSERLCAALLAKIHEQIEGTVHLISAVPADRLNWTPAIPGAWPVDILLGHLLECLAGFCAVLSAVEPKRLAHFSELRAL PVNHACSPGDAIRRIALYRTRIDEGFALLVDASLCKSVSTVFVREGEPLLTLLLGNLEHLVNHKHQLFTYLRQLGVDVTT RDLYQFRGDV >Mature_169_residues GSERLCAALLAKIHEQIEGTVHLISAVPADRLNWTPAIPGAWPVDILLGHLLECLAGFCAVLSAVEPKRLAHFSELRALP VNHACSPGDAIRRIALYRTRIDEGFALLVDASLCKSVSTVFVREGEPLLTLLLGNLEHLVNHKHQLFTYLRQLGVDVTTR DLYQFRGDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18768; Mature: 18637
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSERLCAALLAKIHEQIEGTVHLISAVPADRLNWTPAIPGAWPVDILLGHLLECLAGFC CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AVLSAVEPKRLAHFSELRALPVNHACSPGDAIRRIALYRTRIDEGFALLVDASLCKSVST HHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHEEECHHHHHHHHH VFVREGEPLLTLLLGNLEHLVNHKHQLFTYLRQLGVDVTTRDLYQFRGDV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC >Mature Secondary Structure GSERLCAALLAKIHEQIEGTVHLISAVPADRLNWTPAIPGAWPVDILLGHLLECLAGFC CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AVLSAVEPKRLAHFSELRALPVNHACSPGDAIRRIALYRTRIDEGFALLVDASLCKSVST HHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHEEECHHHHHHHHH VFVREGEPLLTLLLGNLEHLVNHKHQLFTYLRQLGVDVTTRDLYQFRGDV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA