| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is vorC [H]
Identifier: 116620991
GI number: 116620991
Start: 2330236
End: 2330472
Strand: Reverse
Name: vorC [H]
Synonym: Acid_1872
Alternate gene names: 116620991
Gene position: 2330472-2330236 (Counterclockwise)
Preceding gene: 116620992
Following gene: 116620990
Centisome position: 23.39
GC content: 60.76
Gene sequence:
>237_bases ATGGCCGTCAAACCAGACCGCGGATCGGTCGCCATCAATTCGGAAGAATGCAAAGGATGCGGACTCTGCGTGGAGGCCTG CCCTCCCAAAGTTCTCCGCCTCGCCGAATCGCTCAACCATTACGGCTATCACACCTCCGAATATTACGGCTCGGGCTGCA CCGGATGCGGCATCTGCTTCTTCGTCTGTCCCGAACCCGGCGGTATCCAGGTCTCCCGCCTCGCCGCTGCCGCTTAA
Upstream 100 bases:
>100_bases GGATGCATAATAACCCTTGAAGACCTCTTTATAGGGATATATACTGTGATCGGAATGGTAAGCACCAACTTTAAGTGGGT CTACATTCCAGGAGGCAGCA
Downstream 100 bases:
>100_bases GGAGCGCCCATGTCCAAACAACTCACCAAGGGCAATGAAGCCATCGTCAAAGCCGCCGTGCTCGCCGGCTGTCGCGCCTT CTACGGCTACCCCATCACCC
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: VOR; 2-oxoisovalerate ferredoxin reductase subunit gamma; 2-oxoisovalerate oxidoreductase gamma chain [H]
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MAVKPDRGSVAINSEECKGCGLCVEACPPKVLRLAESLNHYGYHTSEYYGSGCTGCGICFFVCPEPGGIQVSRLAAAA
Sequences:
>Translated_78_residues MAVKPDRGSVAINSEECKGCGLCVEACPPKVLRLAESLNHYGYHTSEYYGSGCTGCGICFFVCPEPGGIQVSRLAAAA >Mature_77_residues AVKPDRGSVAINSEECKGCGLCVEACPPKVLRLAESLNHYGYHTSEYYGSGCTGCGICFFVCPEPGGIQVSRLAAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 [H]
Pfam domain/function: NA
EC number: =1.2.7.7 [H]
Molecular weight: Translated: 8144; Mature: 8013
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: PS00028 ZINC_FINGER_C2H2_1 ; PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
10.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 11.5 %Cys+Met (Translated Protein) 10.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 10.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVKPDRGSVAINSEECKGCGLCVEACPPKVLRLAESLNHYGYHTSEYYGSGCTGCGICF CCCCCCCCCEEECCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEE FVCPEPGGIQVSRLAAAA EECCCCCCEEEECEEECC >Mature Secondary Structure AVKPDRGSVAINSEECKGCGLCVEACPPKVLRLAESLNHYGYHTSEYYGSGCTGCGICF CCCCCCCCEEECCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEE FVCPEPGGIQVSRLAAAA EECCCCCCEEEECEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]