| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116620973
Identifier: 116620973
GI number: 116620973
Start: 2308144
End: 2309877
Strand: Direct
Name: 116620973
Synonym: Acid_1854
Alternate gene names: NA
Gene position: 2308144-2309877 (Clockwise)
Preceding gene: 116620972
Following gene: 116620977
Centisome position: 23.16
GC content: 61.25
Gene sequence:
>1734_bases ATGGCTTTGGCTCCATCGCGGTTTGTCCGTTTGTTCGTGTCCTCCTCTTCGGGTCCCGGATTCTCTTCCGGGACCCTCTT TTTTGGGGCGAACGAACACCAGACAACTCAAAAAGGAATTTCAAATCGGATTGCCTGGTGTATACTAACCGCCGGTCCTG ATTTCAGCCTGGAGGTTGCTATGCGCCAGCGCGAGTGTCTGATCGCTCTCCTGATCGCGGTCCTGATGGTTGGCTGCCGC GGGACGAAAAATGCCGGGACCGGCGCCGCGGGCCGCGTAAATTTCGCGGAAGCCGCAAAGTCGCCGGACGCCAAAACACT GCCGCCCAACCACCAGGTGTTCGATCCTGGAACCCAGCCGGATGTGCCCTCCGTACCGACCACCGGGACCCGCAGGCAGG CTGCGCCCCCCGCCGCGAATCCGCAGCCATTGCGCATTCGTCCCTGTAATGTTGCCCTCTTTCCCTGCCCGTTCGATGGC GTGGCGCAAGGCACGTTCGGTTCGCCGCCGGACCCGAACTCCGCAGTCGGCGCCGGCGACATCGTCGAAGTTGTCAACGA CCAGATCCAGGTCACGAGCCGGACGGGTGCCGTGCTGTGCGGTGGCTCCATCACCCTGCAGCGCCTTCTGAGGACCACGG ACAGCCTGACCGATCCGCGGGTGCAGTTCGACAACGTGAACCAGCGCTTTAGTCTGTCGGTTACCGTCGGCAGTCCAGGC GCTTCAGACACGCCCGCTATGCATGTTGCCGCTACCGAGACTTCGGACCCATGTGGCAGCTGGTTCATCTACCGCCTCAC CTTTCACGGAGATGTCTACCCCGCGGGCGAGTTTCTGGATTTTCCCATGCTGGGCCAGGACCAAAACGCCCTGCTGATCT CGCTCCGAGGCTGCCCGAAGAACAACTGCTCCAATGCGAACTTCACCGTATTCGGAATTCCCAAATCCACCATCTACTCC GGCCAGCACGTGGAATTCGATGCCTTCCAGGTGGATTCGCTCACCGCGCCGGTCACCAATGCCGGGCAGCCCCTGATCTC GAGCCCCGCCAGCTTCTTCCTTGCCGCCGTACCCGGCACTGGATACAAGCTCTACCGGCTGACGAATAGCGGCGGCTCCG GCGCAAGCCTGTCGAAGACCACCATCAGCGATGCATTCTCGAAGCCCTCGCGAAGAGTCAACCAGCCCGGAGTCAGCGAC ACGATCGATCCCTCCGATGGCAACATCACCAGCTTCCCCTACTTCGATGGCGCCTTCATCTGGTTTGCCCATGACGCTGA CGACGATGGCTTTCCCACCGTGCGATACGGCAGGGTAGACCCCGGCAAGAACACCGTGGAAACGGCCTTCGCATTCCACA GCGGCAGCAGCGACGATTTCAACCCTTCTATCGCGGTGGGCTTCACGCCAAACGGAGAGAAGGTGTTTCTCAACTGGGTC TTTACCGATACCCCTGCCGGGACGGCGACCACAAACGTGTTCGCCGAAGGGGATGCGCATCTGCCGCTGGTACAGATCGC CGGCCCCGGCACCGCCGACGCCACCGGAGGCGTCGTTACCGGGTGCGGCACGAAATGCAGGTTCGGTGACTATTCGTCGG TGTCCGTGGATCCGGGTGTCGCCGGCTGTGCTTTTGCGACTCAGCAGTATTTTGCAACCAATGGAACTTGGAAGACGCGC ATCACACCCATCGGCCAGTGCGAAAGCATCGTGACTAATGCTCCAGCGCGTTAA
Upstream 100 bases:
>100_bases TGAGCCTCTTCAGGTCAAGCGCCGCAAGTGGTACGCGTTCTGGTAAACGGCTCACCCTAAAGCTTTCCGACTGGATGCCG ATATAACAGGTGTAATAACG
Downstream 100 bases:
>100_bases TTGGCCGGCGTCTTATGGTTTTGCGATGGGCTGCCACAGCTCAATCTTATTCCCATCCGCGTCATAGATCCAGGCAAAGC GGCCGTAGGATTCATCCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 577; Mature: 576
Protein sequence:
>577_residues MALAPSRFVRLFVSSSSGPGFSSGTLFFGANEHQTTQKGISNRIAWCILTAGPDFSLEVAMRQRECLIALLIAVLMVGCR GTKNAGTGAAGRVNFAEAAKSPDAKTLPPNHQVFDPGTQPDVPSVPTTGTRRQAAPPAANPQPLRIRPCNVALFPCPFDG VAQGTFGSPPDPNSAVGAGDIVEVVNDQIQVTSRTGAVLCGGSITLQRLLRTTDSLTDPRVQFDNVNQRFSLSVTVGSPG ASDTPAMHVAATETSDPCGSWFIYRLTFHGDVYPAGEFLDFPMLGQDQNALLISLRGCPKNNCSNANFTVFGIPKSTIYS GQHVEFDAFQVDSLTAPVTNAGQPLISSPASFFLAAVPGTGYKLYRLTNSGGSGASLSKTTISDAFSKPSRRVNQPGVSD TIDPSDGNITSFPYFDGAFIWFAHDADDDGFPTVRYGRVDPGKNTVETAFAFHSGSSDDFNPSIAVGFTPNGEKVFLNWV FTDTPAGTATTNVFAEGDAHLPLVQIAGPGTADATGGVVTGCGTKCRFGDYSSVSVDPGVAGCAFATQQYFATNGTWKTR ITPIGQCESIVTNAPAR
Sequences:
>Translated_577_residues MALAPSRFVRLFVSSSSGPGFSSGTLFFGANEHQTTQKGISNRIAWCILTAGPDFSLEVAMRQRECLIALLIAVLMVGCR GTKNAGTGAAGRVNFAEAAKSPDAKTLPPNHQVFDPGTQPDVPSVPTTGTRRQAAPPAANPQPLRIRPCNVALFPCPFDG VAQGTFGSPPDPNSAVGAGDIVEVVNDQIQVTSRTGAVLCGGSITLQRLLRTTDSLTDPRVQFDNVNQRFSLSVTVGSPG ASDTPAMHVAATETSDPCGSWFIYRLTFHGDVYPAGEFLDFPMLGQDQNALLISLRGCPKNNCSNANFTVFGIPKSTIYS GQHVEFDAFQVDSLTAPVTNAGQPLISSPASFFLAAVPGTGYKLYRLTNSGGSGASLSKTTISDAFSKPSRRVNQPGVSD TIDPSDGNITSFPYFDGAFIWFAHDADDDGFPTVRYGRVDPGKNTVETAFAFHSGSSDDFNPSIAVGFTPNGEKVFLNWV FTDTPAGTATTNVFAEGDAHLPLVQIAGPGTADATGGVVTGCGTKCRFGDYSSVSVDPGVAGCAFATQQYFATNGTWKTR ITPIGQCESIVTNAPAR >Mature_576_residues ALAPSRFVRLFVSSSSGPGFSSGTLFFGANEHQTTQKGISNRIAWCILTAGPDFSLEVAMRQRECLIALLIAVLMVGCRG TKNAGTGAAGRVNFAEAAKSPDAKTLPPNHQVFDPGTQPDVPSVPTTGTRRQAAPPAANPQPLRIRPCNVALFPCPFDGV AQGTFGSPPDPNSAVGAGDIVEVVNDQIQVTSRTGAVLCGGSITLQRLLRTTDSLTDPRVQFDNVNQRFSLSVTVGSPGA SDTPAMHVAATETSDPCGSWFIYRLTFHGDVYPAGEFLDFPMLGQDQNALLISLRGCPKNNCSNANFTVFGIPKSTIYSG QHVEFDAFQVDSLTAPVTNAGQPLISSPASFFLAAVPGTGYKLYRLTNSGGSGASLSKTTISDAFSKPSRRVNQPGVSDT IDPSDGNITSFPYFDGAFIWFAHDADDDGFPTVRYGRVDPGKNTVETAFAFHSGSSDDFNPSIAVGFTPNGEKVFLNWVF TDTPAGTATTNVFAEGDAHLPLVQIAGPGTADATGGVVTGCGTKCRFGDYSSVSVDPGVAGCAFATQQYFATNGTWKTRI TPIGQCESIVTNAPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60619; Mature: 60488
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALAPSRFVRLFVSSSSGPGFSSGTLFFGANEHQTTQKGISNRIAWCILTAGPDFSLEVA CCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHCCCEEEEEEECCCCCEEEEE MRQRECLIALLIAVLMVGCRGTKNAGTGAAGRVNFAEAAKSPDAKTLPPNHQVFDPGTQP HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEECCCCCC DVPSVPTTGTRRQAAPPAANPQPLRIRPCNVALFPCPFDGVAQGTFGSPPDPNSAVGAGD CCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCH IVEVVNDQIQVTSRTGAVLCGGSITLQRLLRTTDSLTDPRVQFDNVNQRFSLSVTVGSPG HHHHHCCEEEEEECCCEEEECCHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEEECCCC ASDTPAMHVAATETSDPCGSWFIYRLTFHGDVYPAGEFLDFPMLGQDQNALLISLRGCPK CCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC NNCSNANFTVFGIPKSTIYSGQHVEFDAFQVDSLTAPVTNAGQPLISSPASFFLAAVPGT CCCCCCCEEEEECCHHHEECCCCEEEEEEEECCCCCCCCCCCCCHHCCCCEEEEEECCCC GYKLYRLTNSGGSGASLSKTTISDAFSKPSRRVNQPGVSDTIDPSDGNITSFPYFDGAFI CEEEEEEECCCCCCCEECHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCEEE WFAHDADDDGFPTVRYGRVDPGKNTVETAFAFHSGSSDDFNPSIAVGFTPNGEKVFLNWV EEEECCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCEEEEEEE FTDTPAGTATTNVFAEGDAHLPLVQIAGPGTADATGGVVTGCGTKCRFGDYSSVSVDPGV EECCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEEECCCC AGCAFATQQYFATNGTWKTRITPIGQCESIVTNAPAR CHHHHHHHHHEECCCEEEEEECCCCCHHHHHHCCCCC >Mature Secondary Structure ALAPSRFVRLFVSSSSGPGFSSGTLFFGANEHQTTQKGISNRIAWCILTAGPDFSLEVA CCCCCEEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHCCCEEEEEEECCCCCEEEEE MRQRECLIALLIAVLMVGCRGTKNAGTGAAGRVNFAEAAKSPDAKTLPPNHQVFDPGTQP HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEECCCCCC DVPSVPTTGTRRQAAPPAANPQPLRIRPCNVALFPCPFDGVAQGTFGSPPDPNSAVGAGD CCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCH IVEVVNDQIQVTSRTGAVLCGGSITLQRLLRTTDSLTDPRVQFDNVNQRFSLSVTVGSPG HHHHHCCEEEEEECCCEEEECCHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEEECCCC ASDTPAMHVAATETSDPCGSWFIYRLTFHGDVYPAGEFLDFPMLGQDQNALLISLRGCPK CCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC NNCSNANFTVFGIPKSTIYSGQHVEFDAFQVDSLTAPVTNAGQPLISSPASFFLAAVPGT CCCCCCCEEEEECCHHHEECCCCEEEEEEEECCCCCCCCCCCCCHHCCCCEEEEEECCCC GYKLYRLTNSGGSGASLSKTTISDAFSKPSRRVNQPGVSDTIDPSDGNITSFPYFDGAFI CEEEEEEECCCCCCCEECHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCEEECCCCCCEEE WFAHDADDDGFPTVRYGRVDPGKNTVETAFAFHSGSSDDFNPSIAVGFTPNGEKVFLNWV EEEECCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCEEEEEEE FTDTPAGTATTNVFAEGDAHLPLVQIAGPGTADATGGVVTGCGTKCRFGDYSSVSVDPGV EECCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEEECCCC AGCAFATQQYFATNGTWKTRITPIGQCESIVTNAPAR CHHHHHHHHHEECCCEEEEEECCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA