| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is ybbP [H]
Identifier: 116620951
GI number: 116620951
Start: 2284107
End: 2286662
Strand: Reverse
Name: ybbP [H]
Synonym: Acid_1832
Alternate gene names: 116620951
Gene position: 2286662-2284107 (Counterclockwise)
Preceding gene: 116620952
Following gene: 116620950
Centisome position: 22.95
GC content: 66.9
Gene sequence:
>2556_bases ATGAGATCCTCGCTGCCCTGGAGCACCGCGCTGCGCATCGCCTGGCGCGAGACCCGCGCCTCGCGCGCCAAATTCCTGTT CGTGATTCTCGCAGTGGCGATCGGTGTCGGCTCACTAACAGGTGTGCGCGGCTTCAGCCGCTCCTTCCGCCACATGCTGC TGCGCGAGGCGCGCACGCTGATGGCCGGCGACATCACGGCACGGGTCTTCGCCCTGCCCAACGCGGAGCAGGAGGCCGCG CTGCACGATCTCGATGCGCGCGGCGTGCGCCGCACCTGGATCACCGAGACGGTCACGATGGCCTCCTCGAGTACGACGCC CGACCCGCTGTTGATCTCGGTTAAGGCCGTGGACCCGGCGGCATATCCCTATTACGGAGTGGTCAAACTCAATCCGCCGC GACCGCTGCGCGGCGCCCTCGACGCCAATTCCGTCGTGGTTTCCGACGACCTGTTAGTACGGCTGAACGTCCATACCGGC GACACGCTGCACATCGGCGGTCAGGATTTCCGCATCGCCGGCGTGGTCACGAGCGAGCCCGACCGTATGACCGGCAGCCT CAACGTCGGCCCGCGCGTCATGATCACGCGCGCCGGGCTGGACCGCACCGGGCTGATCAGCACCGGCAGCCGCGCGGCCG AGCGCTACCTCTTCGCGCTGCCTGCAAGCGGCGGCCCCGATGTTGCCGACGTGCGCGCGGTGCTCAAGCAGGCCTTCCCG GAGGCCACGATCTCCGACTACCGCGAGACCCATCCGATCATCACCCGCGGCCTGGATCGCGCGACGACATTCCTCAGCCT GATCGGGCTGATCGCGCTGGTCATCGGCGCTATGGGGGTGGCCAGCGCGATGCACGGCCACCTGCAGCAGAAGCTCGATT CCATAGCGGTGATGAAGTGTATCGGCGCACGCTCCGCACAGATCATCCGCATCTACGTGGCGCAGACTTTGATGCTCGGG CTGGCCGGCGGATTGCTCGGCGTCGCATTCGGCGTGCTGGTCTCCGCCGCCTTCCCCGGGCTGATCGCGAAGTATTTCCA GATCGACGTCGCAGCCTATTGGGATCCGTGGCCCGCGGTGCAAGGCATCGCAATCGCCTGCCTGGTCACGCTGCTGTTCA CGCTGCCGCCGCTGCTCTCTATCCGCGCCATCCGGCCCGCGTTGATCTTCCGGCGCGATGTGGAGACCGGCCGCGGCGGC GGCAGGCGGCAGGCGCTGCTGGCTCGCGTCGCGATCCTGATTGGCACGGCGGTGGTCGCGGCCACGGTTACGGAAGGCTC GCTCAGGGATTCGGTGCGAACGGGAGCCTATTTCACTCTCGGAGTCGCGATCGGGCTCGCGCTGCTCTGGGCCGCGGGGT GGCTCGCGCTGAAGGGCTTCCGCGCATTTTTGCGACGCTTCGGCGCGCGGCTGCCGGGAGTGCTACGCCACGGCATCGCC AACCTTTATCGTCCGGGAAACCAGGCGCAGGCCGCGGTGGTCGCACTCGGCGTTGGCGTGATGTTTACGCTCACCGTCTT CCTGGTGCAGGGCGCGCTGGTGGAGCAGATCCGCGGGTCGGCGCCACCGGGGATGCCCAATGTTTTTCTGCTGGATATCC CGGGCAATCAGCGGGTGGCGCTCAGCGAGCTGATCCAGAGCCAGCCGGGCGTGAAGGAAGCGCCCGACGTCGCCTTCGCG GTGGCCGCGCGCATCACCGCGGTCAACGGAGTCCCGATCGAGCAGATTCCGCTGCGCGATTTCAATCGACGCTTCATGCG CACGCGCACGGTCACATCGCTCGAGGCCATGCCGCCCGACACCGTCATTTTGCAGGGCGCCTGGTGGAAGCCCGGCGATC ACGAACCGCAGATCTGCGCCAACGAGGAAGCAGCCAAGATTCTCAACCTGAAGCCCGGCTCGGTGGTGGATTGGAATATC TGGAACCGCACCGTGCGCACGCGCGTGGCTTGCGTGGAGCGCACCGAATCGATCCGGATGAGCGGCCGCTTCGAGTTTCT GTTCAACGCGGGGCAGCTCGATGGCTTGCCCGCGGTTTATTATGGCAGCGCGCGGGTGCGGCCCGCCGACGTGGTCGGCC TGCAGCGCGTGGTGTACCAGAAGTTCCCGACGGTGACGGTGGTCAACGTCGCCGACGTGATGCAGATTGTTGAAGACGTA GTGCAGCGCATCGCGGCGGTGATCCGCTTCATTTCCGGCTTCACGATTTTGGCGGGCGCGGTGATGGTGGCTTCGAGCGT CGCGGGGACGCGCTTCCGCCGGATGCGCGAGGTGGTGACGCTGAAGACGCTGGGCGCGACGCGACGCCGCATCGCGTGGA TCTTCTCGGTGGAGTTCATCGCGCTCGGCGCGGTCGCCGGGTTGATGGGCAGTCTGCTGGCCGCCGGGTTCGCCGCGCTG GTACTGAAGAAGCTGCTCGAGATTGAGTTCCATCCCTCGCTTGGAACGCATACTCTCGCGATCGTGATTGCCGCCGCGGT GGCCGCCGGCGCGGGCTGGGCCGCTAGTTTCCGCATCCTCGGCAGGAAGCCGCTCGAAATTCTACGCGAGGAATAG
Upstream 100 bases:
>100_bases GCGAGCAGGGCACCACGATGGTGATGGTGACGCACGAACAAACCCTGGCGGATAGCGCGGACCGCCGCATCGTACTCCAC GACGGGCTGATTGTAAGTCA
Downstream 100 bases:
>100_bases GTTAGGATATTTGGATCCGAGGTATTAATGAGACTGTCTCGCCAAATCACCGCTATCGCTCTATCTGTCTGCATGACGGC AGCCTTTGCACCCGCCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 851; Mature: 851
Protein sequence:
>851_residues MRSSLPWSTALRIAWRETRASRAKFLFVILAVAIGVGSLTGVRGFSRSFRHMLLREARTLMAGDITARVFALPNAEQEAA LHDLDARGVRRTWITETVTMASSSTTPDPLLISVKAVDPAAYPYYGVVKLNPPRPLRGALDANSVVVSDDLLVRLNVHTG DTLHIGGQDFRIAGVVTSEPDRMTGSLNVGPRVMITRAGLDRTGLISTGSRAAERYLFALPASGGPDVADVRAVLKQAFP EATISDYRETHPIITRGLDRATTFLSLIGLIALVIGAMGVASAMHGHLQQKLDSIAVMKCIGARSAQIIRIYVAQTLMLG LAGGLLGVAFGVLVSAAFPGLIAKYFQIDVAAYWDPWPAVQGIAIACLVTLLFTLPPLLSIRAIRPALIFRRDVETGRGG GRRQALLARVAILIGTAVVAATVTEGSLRDSVRTGAYFTLGVAIGLALLWAAGWLALKGFRAFLRRFGARLPGVLRHGIA NLYRPGNQAQAAVVALGVGVMFTLTVFLVQGALVEQIRGSAPPGMPNVFLLDIPGNQRVALSELIQSQPGVKEAPDVAFA VAARITAVNGVPIEQIPLRDFNRRFMRTRTVTSLEAMPPDTVILQGAWWKPGDHEPQICANEEAAKILNLKPGSVVDWNI WNRTVRTRVACVERTESIRMSGRFEFLFNAGQLDGLPAVYYGSARVRPADVVGLQRVVYQKFPTVTVVNVADVMQIVEDV VQRIAAVIRFISGFTILAGAVMVASSVAGTRFRRMREVVTLKTLGATRRRIAWIFSVEFIALGAVAGLMGSLLAAGFAAL VLKKLLEIEFHPSLGTHTLAIVIAAAVAAGAGWAASFRILGRKPLEILREE
Sequences:
>Translated_851_residues MRSSLPWSTALRIAWRETRASRAKFLFVILAVAIGVGSLTGVRGFSRSFRHMLLREARTLMAGDITARVFALPNAEQEAA LHDLDARGVRRTWITETVTMASSSTTPDPLLISVKAVDPAAYPYYGVVKLNPPRPLRGALDANSVVVSDDLLVRLNVHTG DTLHIGGQDFRIAGVVTSEPDRMTGSLNVGPRVMITRAGLDRTGLISTGSRAAERYLFALPASGGPDVADVRAVLKQAFP EATISDYRETHPIITRGLDRATTFLSLIGLIALVIGAMGVASAMHGHLQQKLDSIAVMKCIGARSAQIIRIYVAQTLMLG LAGGLLGVAFGVLVSAAFPGLIAKYFQIDVAAYWDPWPAVQGIAIACLVTLLFTLPPLLSIRAIRPALIFRRDVETGRGG GRRQALLARVAILIGTAVVAATVTEGSLRDSVRTGAYFTLGVAIGLALLWAAGWLALKGFRAFLRRFGARLPGVLRHGIA NLYRPGNQAQAAVVALGVGVMFTLTVFLVQGALVEQIRGSAPPGMPNVFLLDIPGNQRVALSELIQSQPGVKEAPDVAFA VAARITAVNGVPIEQIPLRDFNRRFMRTRTVTSLEAMPPDTVILQGAWWKPGDHEPQICANEEAAKILNLKPGSVVDWNI WNRTVRTRVACVERTESIRMSGRFEFLFNAGQLDGLPAVYYGSARVRPADVVGLQRVVYQKFPTVTVVNVADVMQIVEDV VQRIAAVIRFISGFTILAGAVMVASSVAGTRFRRMREVVTLKTLGATRRRIAWIFSVEFIALGAVAGLMGSLLAAGFAAL VLKKLLEIEFHPSLGTHTLAIVIAAAVAAGAGWAASFRILGRKPLEILREE >Mature_851_residues MRSSLPWSTALRIAWRETRASRAKFLFVILAVAIGVGSLTGVRGFSRSFRHMLLREARTLMAGDITARVFALPNAEQEAA LHDLDARGVRRTWITETVTMASSSTTPDPLLISVKAVDPAAYPYYGVVKLNPPRPLRGALDANSVVVSDDLLVRLNVHTG DTLHIGGQDFRIAGVVTSEPDRMTGSLNVGPRVMITRAGLDRTGLISTGSRAAERYLFALPASGGPDVADVRAVLKQAFP EATISDYRETHPIITRGLDRATTFLSLIGLIALVIGAMGVASAMHGHLQQKLDSIAVMKCIGARSAQIIRIYVAQTLMLG LAGGLLGVAFGVLVSAAFPGLIAKYFQIDVAAYWDPWPAVQGIAIACLVTLLFTLPPLLSIRAIRPALIFRRDVETGRGG GRRQALLARVAILIGTAVVAATVTEGSLRDSVRTGAYFTLGVAIGLALLWAAGWLALKGFRAFLRRFGARLPGVLRHGIA NLYRPGNQAQAAVVALGVGVMFTLTVFLVQGALVEQIRGSAPPGMPNVFLLDIPGNQRVALSELIQSQPGVKEAPDVAFA VAARITAVNGVPIEQIPLRDFNRRFMRTRTVTSLEAMPPDTVILQGAWWKPGDHEPQICANEEAAKILNLKPGSVVDWNI WNRTVRTRVACVERTESIRMSGRFEFLFNAGQLDGLPAVYYGSARVRPADVVGLQRVVYQKFPTVTVVNVADVMQIVEDV VQRIAAVIRFISGFTILAGAVMVASSVAGTRFRRMREVVTLKTLGATRRRIAWIFSVEFIALGAVAGLMGSLLAAGFAAL VLKKLLEIEFHPSLGTHTLAIVIAAAVAAGAGWAASFRILGRKPLEILREE
Specific function: Unknown
COG id: COG3127
COG function: function code Q; Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1786704, Length=812, Percent_Identity=26.4778325123153, Blast_Score=213, Evalue=5e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 91527; Mature: 91527
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSLPWSTALRIAWRETRASRAKFLFVILAVAIGVGSLTGVRGFSRSFRHMLLREARTL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH MAGDITARVFALPNAEQEAALHDLDARGVRRTWITETVTMASSSTTPDPLLISVKAVDPA HHCCCEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHEECCCCCCCCCEEEEEEECCCC AYPYYGVVKLNPPRPLRGALDANSVVVSDDLLVRLNVHTGDTLHIGGQDFRIAGVVTSEP CCCEEEEEEECCCCCCCCCCCCCCEEEECCEEEEEEECCCCEEEECCCCEEEEEEEECCC DRMTGSLNVGPRVMITRAGLDRTGLISTGSRAAERYLFALPASGGPDVADVRAVLKQAFP CCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCEEEEECCCCCCCHHHHHHHHHHHCC EATISDYRETHPIITRGLDRATTFLSLIGLIALVIGAMGVASAMHGHLQQKLDSIAVMKC CCHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGARSAQIIRIYVAQTLMLGLAGGLLGVAFGVLVSAAFPGLIAKYFQIDVAAYWDPWPAV HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHH QGIAIACLVTLLFTLPPLLSIRAIRPALIFRRDVETGRGGGRRQALLARVAILIGTAVVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH ATVTEGSLRDSVRTGAYFTLGVAIGLALLWAAGWLALKGFRAFLRRFGARLPGVLRHGIA HHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH NLYRPGNQAQAAVVALGVGVMFTLTVFLVQGALVEQIRGSAPPGMPNVFLLDIPGNQRVA HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHH LSELIQSQPGVKEAPDVAFAVAARITAVNGVPIEQIPLRDFNRRFMRTRTVTSLEAMPPD HHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC TVILQGAWWKPGDHEPQICANEEAAKILNLKPGSVVDWNIWNRTVRTRVACVERTESIRM CEEEECCCCCCCCCCCCCCCCCHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHEE SGRFEFLFNAGQLDGLPAVYYGSARVRPADVVGLQRVVYQKFPTVTVVNVADVMQIVEDV CCCEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHH VQRIAAVIRFISGFTILAGAVMVASSVAGTRFRRMREVVTLKTLGATRRRIAWIFSVEFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEHHHHHHHH ALGAVAGLMGSLLAAGFAALVLKKLLEIEFHPSLGTHTLAIVIAAAVAAGAGWAASFRIL HHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHCC GRKPLEILREE CCCCHHHHCCC >Mature Secondary Structure MRSSLPWSTALRIAWRETRASRAKFLFVILAVAIGVGSLTGVRGFSRSFRHMLLREARTL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH MAGDITARVFALPNAEQEAALHDLDARGVRRTWITETVTMASSSTTPDPLLISVKAVDPA HHCCCEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHEECCCCCCCCCEEEEEEECCCC AYPYYGVVKLNPPRPLRGALDANSVVVSDDLLVRLNVHTGDTLHIGGQDFRIAGVVTSEP CCCEEEEEEECCCCCCCCCCCCCCEEEECCEEEEEEECCCCEEEECCCCEEEEEEEECCC DRMTGSLNVGPRVMITRAGLDRTGLISTGSRAAERYLFALPASGGPDVADVRAVLKQAFP CCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCEEEEECCCCCCCHHHHHHHHHHHCC EATISDYRETHPIITRGLDRATTFLSLIGLIALVIGAMGVASAMHGHLQQKLDSIAVMKC CCHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGARSAQIIRIYVAQTLMLGLAGGLLGVAFGVLVSAAFPGLIAKYFQIDVAAYWDPWPAV HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHH QGIAIACLVTLLFTLPPLLSIRAIRPALIFRRDVETGRGGGRRQALLARVAILIGTAVVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH ATVTEGSLRDSVRTGAYFTLGVAIGLALLWAAGWLALKGFRAFLRRFGARLPGVLRHGIA HHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH NLYRPGNQAQAAVVALGVGVMFTLTVFLVQGALVEQIRGSAPPGMPNVFLLDIPGNQRVA HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHH LSELIQSQPGVKEAPDVAFAVAARITAVNGVPIEQIPLRDFNRRFMRTRTVTSLEAMPPD HHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC TVILQGAWWKPGDHEPQICANEEAAKILNLKPGSVVDWNIWNRTVRTRVACVERTESIRM CEEEECCCCCCCCCCCCCCCCCHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHEE SGRFEFLFNAGQLDGLPAVYYGSARVRPADVVGLQRVVYQKFPTVTVVNVADVMQIVEDV CCCEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHH VQRIAAVIRFISGFTILAGAVMVASSVAGTRFRRMREVVTLKTLGATRRRIAWIFSVEFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEHHHHHHHH ALGAVAGLMGSLLAAGFAALVLKKLLEIEFHPSLGTHTLAIVIAAAVAAGAGWAASFRIL HHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHCC GRKPLEILREE CCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]