| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116620947
Identifier: 116620947
GI number: 116620947
Start: 2276463
End: 2278487
Strand: Direct
Name: 116620947
Synonym: Acid_1828
Alternate gene names: NA
Gene position: 2276463-2278487 (Clockwise)
Preceding gene: 116620937
Following gene: 116620948
Centisome position: 22.84
GC content: 62.37
Gene sequence:
>2025_bases ATGTTAGCCGTATCGGCTGCTTCCGCGGTACCCGGAAATCGCGACTTGCCCTTTCGCCAGGTCCATCTTGACTTCCACAA CGGAGAACTGATCCCGGATATCGGCGCGGAATTTGACGTCCGGGAATTCGTCGCGGTCCTCAAAAAGGCTCGCGTCAATT CCGTCAACATTTTCGCCAAGTGCATGCACGGGTATGCTTACTACCAGACGAAGATCGGCGTACCTCATCCCTCGCTGAAA ATCGATCTCTTAGGCGAGATGCTGAAGGAACTCCGCCCGGCGGGCATGGCCGCGAACTATTACTACGGCCTCACCTGGGA TGCGCTGGCGGCCGAGCGGCACCCCGAGTGGCGCATTCTCGCCCGTGATGGCAGCCCGGTAATCTTCGGCGGCCACAACT CTGGCGTGGAGTGGCGGCAGGTCTGCCTGAACTCCCCCTATCTGGATCAGGTGGCCCGCGAAAACGAGGAGATCCTCACC CGCTACCGTGCCGATGGCGCCTGGTTCGATATCGCCTGGACGCCGCCGGACGGCTGCTTCTGCCGCTGGTGCCGGGCCGA GCGCGAACGGACCGGGCTGGGCGATTCCGCCCCGGATATCAAGCGTCATAACAAGATGGTTGCCTTGCGCATGGAAGCGC GGCTGACCGAACTGGTGCATCGTCATTGGCCTGAAGCATTGGTCTTTTACAATAGCCGTACCGTGCTTGGAATCCGCGAC GAACTGGCCAACTATTCGCATATCGAGATCGAGTCGCTCCCCACCGGCGGGTGGGGATATACTCACCTGCAGCAGCGTGT GCGGCACATGCGAACTCTGGGGAAGCAACTGGTCGGGATGAACGGCCGCTTCCACAAGTCCTGGGGCGATTTCGGCGGGC TCAAGAATCAGGCCGCGTTGGATTACGAGTGTCTTAGCTTCCTCTCTAATGGCACGCGCTGCTGCGTGGGCGATCAACTG CATCCGCGCGGACGCCTGGATGCCGCCACCTACGCGCGGATCGGCGCTACTTATGCCAAGGTGGAGGCGCTCGAGCCCTA CGTGCGCGGAGCGCGAGTCCTCGCCGATATCGGGGTCGTCTCCGCCGCCGTCAATACAGTGGAGACCACCTCTGGAATTC CGCTTGTGGATGCCGGCTTTACGAACATGCTCGTGGAACTCCACCAGCAATTCGACATTCTGGACCTGGAGAGCCGGTTC GAGGATTACCGGCTGCTTATCCTGCCCGACGACATTCATCCGGTTCCCGGGCTGGTCGCCGCACTTCGGCGCTATTTGGC CGGCGGCGGCGCGCTGATCGCGAGCCACCGCAGCCTGTTCGACCCCGGCACTCGAGATTTTGCCCTACCCGAGCTGGGAG TGAAGTTCCTCGGAGAGTCTCGCTATCGCGACGAGTATTTTTATCCGGCCCCCGGCGCTTTCCCCGACCTCCCCGACTAC GCCTACTTTCTGTATCAGCGCGGCTTAAGTATCGCGGCACTGCCCGGCGCCGAGGTGCTCGCCACCTACGGCCATCCCTA TTTCGACCGTTCGCCCGAACACTACAGCTCGCACGTGCAGACGCCGGTAGACAGGCCGACCACTGAGCCGCTTGTGGTCG CGCTCGGGCGAACCGCGTATATCGCCAATCCCTTGTTCCGTTCCTATGCGGCCGATGGCTACGGCGTCTATAAGCAGATG GTCGGCGCGCTCATCCGCCGCCTGCTTCCGAGCCCCGTGCTCCGCACCGCCAATCTCCCTTCCACCGCGCAGGTCACCGT CATGGAACAGGATGGTCCGGCGGGGAAGCGCCGCGTGGTCCACTTGCTCTATTACCCGCTGACGCGCCGCGCTCCGAATC TGGACGTCATCGAAGAGCCGGGACTGCTCCAAAATGTTCATCTGCAACTACGTACTCCGGCCCCGCCGCGCGCCGCCCGC CTGGCGCCCGCGGGAACAGACCTGCCGGTACGGTATGCGAATGGTTATGCGGCATTGACCGTGCCCTTCGTCACCGGATA CCAGGCGATCATGATCGAGCTTTGA
Upstream 100 bases:
>100_bases AACACCTCTCTAAACCCTCATTTGAGGCTACTGTAGCACAGTGAGTCTCGCCAGGTTGTCGAGAATAGACCGCCGCCAGT TCCTGCTTTCCAGCGGCGCC
Downstream 100 bases:
>100_bases ATCGAGGAGAAACCATGAAGGTAGGGACCGTTATTGCGACTTTCGCGCTGGCTGCTCTGTTAACCCATGATGCGGCGGCT CAGATCAACTCCGGCGTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 674; Mature: 674
Protein sequence:
>674_residues MLAVSAASAVPGNRDLPFRQVHLDFHNGELIPDIGAEFDVREFVAVLKKARVNSVNIFAKCMHGYAYYQTKIGVPHPSLK IDLLGEMLKELRPAGMAANYYYGLTWDALAAERHPEWRILARDGSPVIFGGHNSGVEWRQVCLNSPYLDQVARENEEILT RYRADGAWFDIAWTPPDGCFCRWCRAERERTGLGDSAPDIKRHNKMVALRMEARLTELVHRHWPEALVFYNSRTVLGIRD ELANYSHIEIESLPTGGWGYTHLQQRVRHMRTLGKQLVGMNGRFHKSWGDFGGLKNQAALDYECLSFLSNGTRCCVGDQL HPRGRLDAATYARIGATYAKVEALEPYVRGARVLADIGVVSAAVNTVETTSGIPLVDAGFTNMLVELHQQFDILDLESRF EDYRLLILPDDIHPVPGLVAALRRYLAGGGALIASHRSLFDPGTRDFALPELGVKFLGESRYRDEYFYPAPGAFPDLPDY AYFLYQRGLSIAALPGAEVLATYGHPYFDRSPEHYSSHVQTPVDRPTTEPLVVALGRTAYIANPLFRSYAADGYGVYKQM VGALIRRLLPSPVLRTANLPSTAQVTVMEQDGPAGKRRVVHLLYYPLTRRAPNLDVIEEPGLLQNVHLQLRTPAPPRAAR LAPAGTDLPVRYANGYAALTVPFVTGYQAIMIEL
Sequences:
>Translated_674_residues MLAVSAASAVPGNRDLPFRQVHLDFHNGELIPDIGAEFDVREFVAVLKKARVNSVNIFAKCMHGYAYYQTKIGVPHPSLK IDLLGEMLKELRPAGMAANYYYGLTWDALAAERHPEWRILARDGSPVIFGGHNSGVEWRQVCLNSPYLDQVARENEEILT RYRADGAWFDIAWTPPDGCFCRWCRAERERTGLGDSAPDIKRHNKMVALRMEARLTELVHRHWPEALVFYNSRTVLGIRD ELANYSHIEIESLPTGGWGYTHLQQRVRHMRTLGKQLVGMNGRFHKSWGDFGGLKNQAALDYECLSFLSNGTRCCVGDQL HPRGRLDAATYARIGATYAKVEALEPYVRGARVLADIGVVSAAVNTVETTSGIPLVDAGFTNMLVELHQQFDILDLESRF EDYRLLILPDDIHPVPGLVAALRRYLAGGGALIASHRSLFDPGTRDFALPELGVKFLGESRYRDEYFYPAPGAFPDLPDY AYFLYQRGLSIAALPGAEVLATYGHPYFDRSPEHYSSHVQTPVDRPTTEPLVVALGRTAYIANPLFRSYAADGYGVYKQM VGALIRRLLPSPVLRTANLPSTAQVTVMEQDGPAGKRRVVHLLYYPLTRRAPNLDVIEEPGLLQNVHLQLRTPAPPRAAR LAPAGTDLPVRYANGYAALTVPFVTGYQAIMIEL >Mature_674_residues MLAVSAASAVPGNRDLPFRQVHLDFHNGELIPDIGAEFDVREFVAVLKKARVNSVNIFAKCMHGYAYYQTKIGVPHPSLK IDLLGEMLKELRPAGMAANYYYGLTWDALAAERHPEWRILARDGSPVIFGGHNSGVEWRQVCLNSPYLDQVARENEEILT RYRADGAWFDIAWTPPDGCFCRWCRAERERTGLGDSAPDIKRHNKMVALRMEARLTELVHRHWPEALVFYNSRTVLGIRD ELANYSHIEIESLPTGGWGYTHLQQRVRHMRTLGKQLVGMNGRFHKSWGDFGGLKNQAALDYECLSFLSNGTRCCVGDQL HPRGRLDAATYARIGATYAKVEALEPYVRGARVLADIGVVSAAVNTVETTSGIPLVDAGFTNMLVELHQQFDILDLESRF EDYRLLILPDDIHPVPGLVAALRRYLAGGGALIASHRSLFDPGTRDFALPELGVKFLGESRYRDEYFYPAPGAFPDLPDY AYFLYQRGLSIAALPGAEVLATYGHPYFDRSPEHYSSHVQTPVDRPTTEPLVVALGRTAYIANPLFRSYAADGYGVYKQM VGALIRRLLPSPVLRTANLPSTAQVTVMEQDGPAGKRRVVHLLYYPLTRRAPNLDVIEEPGLLQNVHLQLRTPAPPRAAR LAPAGTDLPVRYANGYAALTVPFVTGYQAIMIEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75183; Mature: 75183
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAVSAASAVPGNRDLPFRQVHLDFHNGELIPDIGAEFDVREFVAVLKKARVNSVNIFAK CEEECCCCCCCCCCCCCEEEEEEEECCCEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHH CMHGYAYYQTKIGVPHPSLKIDLLGEMLKELRPAGMAANYYYGLTWDALAAERHPEWRIL HHHCCEEEEEEECCCCCCEEHHHHHHHHHHHCCCCCEECEEEECCHHHHHHCCCCCEEEE ARDGSPVIFGGHNSGVEWRQVCLNSPYLDQVARENEEILTRYRADGAWFDIAWTPPDGCF EECCCEEEECCCCCCHHHHHHHCCCCHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCHH CRWCRAERERTGLGDSAPDIKRHNKMVALRMEARLTELVHRHWPEALVFYNSRTVLGIRD HHHHHHHHHHCCCCCCCCCHHHCCCEEEEEHHHHHHHHHHHHCCCEEEEECCCEEEEEHH ELANYSHIEIESLPTGGWGYTHLQQRVRHMRTLGKQLVGMNGRFHKSWGDFGGLKNQAAL HHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHCCCCCCCCCC DYECLSFLSNGTRCCVGDQLHPRGRLDAATYARIGATYAKVEALEPYVRGARVLADIGVV CHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAAVNTVETTSGIPLVDAGFTNMLVELHQQFDILDLESRFEDYRLLILPDDIHPVPGLVA HHHHHHHHCCCCCCEEECCHHHHHHHHHHHCCEEEHHCCCCCEEEEEEECCCCCCCHHHH ALRRYLAGGGALIASHRSLFDPGTRDFALPELGVKFLGESRYRDEYFYPAPGAFPDLPDY HHHHHHCCCCEEEECCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH AYFLYQRGLSIAALPGAEVLATYGHPYFDRSPEHYSSHVQTPVDRPTTEPLVVALGRTAY HHHHHHCCCCEEECCCHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCHHH IANPLFRSYAADGYGVYKQMVGALIRRLLPSPVLRTANLPSTAQVTVMEQDGPAGKRRVV HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEEECCCCCCHHHEE HLLYYPLTRRAPNLDVIEEPGLLQNVHLQLRTPAPPRAARLAPAGTDLPVRYANGYAALT EEEEEHHHCCCCCCCEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEECCCEEEEE VPFVTGYQAIMIEL EEECCCCEEEEEEC >Mature Secondary Structure MLAVSAASAVPGNRDLPFRQVHLDFHNGELIPDIGAEFDVREFVAVLKKARVNSVNIFAK CEEECCCCCCCCCCCCCEEEEEEEECCCEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHH CMHGYAYYQTKIGVPHPSLKIDLLGEMLKELRPAGMAANYYYGLTWDALAAERHPEWRIL HHHCCEEEEEEECCCCCCEEHHHHHHHHHHHCCCCCEECEEEECCHHHHHHCCCCCEEEE ARDGSPVIFGGHNSGVEWRQVCLNSPYLDQVARENEEILTRYRADGAWFDIAWTPPDGCF EECCCEEEECCCCCCHHHHHHHCCCCHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCHH CRWCRAERERTGLGDSAPDIKRHNKMVALRMEARLTELVHRHWPEALVFYNSRTVLGIRD HHHHHHHHHHCCCCCCCCCHHHCCCEEEEEHHHHHHHHHHHHCCCEEEEECCCEEEEEHH ELANYSHIEIESLPTGGWGYTHLQQRVRHMRTLGKQLVGMNGRFHKSWGDFGGLKNQAAL HHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHCCCCCCCCCC DYECLSFLSNGTRCCVGDQLHPRGRLDAATYARIGATYAKVEALEPYVRGARVLADIGVV CHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAAVNTVETTSGIPLVDAGFTNMLVELHQQFDILDLESRFEDYRLLILPDDIHPVPGLVA HHHHHHHHCCCCCCEEECCHHHHHHHHHHHCCEEEHHCCCCCEEEEEEECCCCCCCHHHH ALRRYLAGGGALIASHRSLFDPGTRDFALPELGVKFLGESRYRDEYFYPAPGAFPDLPDY HHHHHHCCCCEEEECCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH AYFLYQRGLSIAALPGAEVLATYGHPYFDRSPEHYSSHVQTPVDRPTTEPLVVALGRTAY HHHHHHCCCCEEECCCHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCHHH IANPLFRSYAADGYGVYKQMVGALIRRLLPSPVLRTANLPSTAQVTVMEQDGPAGKRRVV HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEEEECCCCCCHHHEE HLLYYPLTRRAPNLDVIEEPGLLQNVHLQLRTPAPPRAARLAPAGTDLPVRYANGYAALT EEEEEHHHCCCCCCCEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEECCCEEEEE VPFVTGYQAIMIEL EEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA