| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620932
Identifier: 116620932
GI number: 116620932
Start: 2252264
End: 2253940
Strand: Direct
Name: 116620932
Synonym: Acid_1813
Alternate gene names: NA
Gene position: 2252264-2253940 (Clockwise)
Preceding gene: 116620928
Following gene: 116620933
Centisome position: 22.6
GC content: 62.73
Gene sequence:
>1677_bases ATGCGAATTCTTCCTGCCGTTCTTCTCGCCGTCTCTGCCGCCGCGGCGCAGACCGGGATCTTCGACCTCTCGACCAGCGG CGATGGCAGTATCGCGTTCTTCAGCACGGCACTTACACCCAAGGGCGCGGTCGCCTCTGCCCAGGCCGTACTCCCGCCAA CTCTCCGCATCTATCGCGCCGATTCCGCCGGGGTGCAACTGTACCTGGAGCGGCATCGTGTGGATCCGCCGGCAAATACC CCGATGGGCCAGTTCTCTCTTTCGAATTACTACAGCCTCGGGCGTCCGGAGGCCAGCCGCGATGGCAGCGTCACGGTCGT TACCGGACAGTGCCAGTGTGTCGGCGGAGCACACTGCATTAACGCCGCGCTGTTTCAGGCCAGCGTCGGGAATCGAAATT ATCCCGGCAAGGGTCGCTTGAGCGGGAACGGCCGTTATCTGTTCACCTATGGCGCCAACAATACGCCGGGCTTCTACGCG TCCATCATCGACCTGCAGACCGGAGACACCTACGACCGCGCGCCCGACAATCCTGAACACGCGCCCGGCGCCGGCCGCGT GGTCGCCGACGATGGCACGGTGGCCTACATGGATTTCGATCTCACACTGCTTACCCCGGTATCCGTGCAGCGCGTTCCGC TTCACTTTCCTAACTCCGGAGGAGCCGTGATCGATCGTGCCGCTCGCATGGTGGTCTATGTGAACCAGGGTTCGATCCGC ATTTACCGCATCGCCGAACAGCAGGACGCCCTGCTGGCGGCTGTCCCGGATTCCGATAGCTCCGCCCCCTATCTTGCCGC CGATGGAAGCCGCGTTATGTTTCTCTCCGGCCATCCCGGCGCCCTCCAGCTCTACACCGTCAACACCGATGGCTCACAAT TGCAGCGGGTGACGCACGAGCCATCGGGCGTGACGCAGGGCGCCATGTCCGACGACGGAAAAGCGGCATGGTACTTTGCG GGCGACGCGCGGCTCTACCGAATGAACCTCGATACCGGCGAAGCGCACCTACGCATGGCCGCACCGCCGCAGATCGGCGA CCCATTCCCGATCGCGCCCGGCTCAACCTATGCGCTCTCAGGCACCGGCTTCAGCGACCCGGTATTTACCGCCGGGTACC CGTTGCCGCGCTCTCTCGGCGGCGTTTCGGTGAGCGTGAACGGAGTCCTGGCGGCCCTCTACACAGTTGCGCCGCAGCAA ATCCTCTTTCAGGCGCCTTGGGACACCGTCACGCCCGCGACCCTGGAAGTGCACGCCGCATCCACCTCACCCTTCGAGCC GAAGCTTCAATTCCAGACCACGGCGGCCCCGTCGCTCCCCGCGATTCTACTGGCGATTCACGAGGATTGGAGCGGCCTTG TTACCGCCACAGAGCCCGCCCGCTCCGGCGAGATTCTGCATCTGTACGGTACCGGCTTTGGCCCGGTTGATTCCCAGCAA CTGGACGGTGTCCCCGCACCTGCCGATCCTCCCGCGCACACACAGTTGCCGGTCACCTGTTCCGATACAGCTACGAGCCA GGCAATTCCGGTGCTCTTCGCGGGTCTGGCGCCGAACCTCGTGGGATACTACCAGTTGGATTTGCAGCTGTTTCATTTTT ATGACGGAGTAACTCGGCTTACTTTGGAGTGCGATACTTCAGGTCATAAGATTACAGTTACGATACCCGCGGTATGA
Upstream 100 bases:
>100_bases AAGCAACAGCCAGCCAGTTGCAGGCAATCGCATGTAGATATCGTAAAGCACTTGCGCCAGTGTAGTTGGGTTACCGTGCC GCGGGTCTTAGTGTCGGACC
Downstream 100 bases:
>100_bases TTCCTCGCCTACCAGGTCGAAAGTCCCATGCTACGATCTACCGATTTCAGTCGTAACAGGAGGACTCAGACTCATGCGAA GTGTATTGATTCACCTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MRILPAVLLAVSAAAAQTGIFDLSTSGDGSIAFFSTALTPKGAVASAQAVLPPTLRIYRADSAGVQLYLERHRVDPPANT PMGQFSLSNYYSLGRPEASRDGSVTVVTGQCQCVGGAHCINAALFQASVGNRNYPGKGRLSGNGRYLFTYGANNTPGFYA SIIDLQTGDTYDRAPDNPEHAPGAGRVVADDGTVAYMDFDLTLLTPVSVQRVPLHFPNSGGAVIDRAARMVVYVNQGSIR IYRIAEQQDALLAAVPDSDSSAPYLAADGSRVMFLSGHPGALQLYTVNTDGSQLQRVTHEPSGVTQGAMSDDGKAAWYFA GDARLYRMNLDTGEAHLRMAAPPQIGDPFPIAPGSTYALSGTGFSDPVFTAGYPLPRSLGGVSVSVNGVLAALYTVAPQQ ILFQAPWDTVTPATLEVHAASTSPFEPKLQFQTTAAPSLPAILLAIHEDWSGLVTATEPARSGEILHLYGTGFGPVDSQQ LDGVPAPADPPAHTQLPVTCSDTATSQAIPVLFAGLAPNLVGYYQLDLQLFHFYDGVTRLTLECDTSGHKITVTIPAV
Sequences:
>Translated_558_residues MRILPAVLLAVSAAAAQTGIFDLSTSGDGSIAFFSTALTPKGAVASAQAVLPPTLRIYRADSAGVQLYLERHRVDPPANT PMGQFSLSNYYSLGRPEASRDGSVTVVTGQCQCVGGAHCINAALFQASVGNRNYPGKGRLSGNGRYLFTYGANNTPGFYA SIIDLQTGDTYDRAPDNPEHAPGAGRVVADDGTVAYMDFDLTLLTPVSVQRVPLHFPNSGGAVIDRAARMVVYVNQGSIR IYRIAEQQDALLAAVPDSDSSAPYLAADGSRVMFLSGHPGALQLYTVNTDGSQLQRVTHEPSGVTQGAMSDDGKAAWYFA GDARLYRMNLDTGEAHLRMAAPPQIGDPFPIAPGSTYALSGTGFSDPVFTAGYPLPRSLGGVSVSVNGVLAALYTVAPQQ ILFQAPWDTVTPATLEVHAASTSPFEPKLQFQTTAAPSLPAILLAIHEDWSGLVTATEPARSGEILHLYGTGFGPVDSQQ LDGVPAPADPPAHTQLPVTCSDTATSQAIPVLFAGLAPNLVGYYQLDLQLFHFYDGVTRLTLECDTSGHKITVTIPAV >Mature_558_residues MRILPAVLLAVSAAAAQTGIFDLSTSGDGSIAFFSTALTPKGAVASAQAVLPPTLRIYRADSAGVQLYLERHRVDPPANT PMGQFSLSNYYSLGRPEASRDGSVTVVTGQCQCVGGAHCINAALFQASVGNRNYPGKGRLSGNGRYLFTYGANNTPGFYA SIIDLQTGDTYDRAPDNPEHAPGAGRVVADDGTVAYMDFDLTLLTPVSVQRVPLHFPNSGGAVIDRAARMVVYVNQGSIR IYRIAEQQDALLAAVPDSDSSAPYLAADGSRVMFLSGHPGALQLYTVNTDGSQLQRVTHEPSGVTQGAMSDDGKAAWYFA GDARLYRMNLDTGEAHLRMAAPPQIGDPFPIAPGSTYALSGTGFSDPVFTAGYPLPRSLGGVSVSVNGVLAALYTVAPQQ ILFQAPWDTVTPATLEVHAASTSPFEPKLQFQTTAAPSLPAILLAIHEDWSGLVTATEPARSGEILHLYGTGFGPVDSQQ LDGVPAPADPPAHTQLPVTCSDTATSQAIPVLFAGLAPNLVGYYQLDLQLFHFYDGVTRLTLECDTSGHKITVTIPAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58729; Mature: 58729
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILPAVLLAVSAAAAQTGIFDLSTSGDGSIAFFSTALTPKGAVASAQAVLPPTLRIYRA CCCHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCCCCCCCCCCEECCCEEEEEEC DSAGVQLYLERHRVDPPANTPMGQFSLSNYYSLGRPEASRDGSVTVVTGQCQCVGGAHCI CCCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEECCEEEECCHHHH NAALFQASVGNRNYPGKGRLSGNGRYLFTYGANNTPGFYASIIDLQTGDTYDRAPDNPEH HHHHEEECCCCCCCCCCCEECCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCC APGAGRVVADDGTVAYMDFDLTLLTPVSVQRVPLHFPNSGGAVIDRAARMVVYVNQGSIR CCCCCEEEECCCEEEEEEEEEEEECCCCEEEEEEECCCCCCHHHCCCEEEEEEEECCCEE IYRIAEQQDALLAAVPDSDSSAPYLAADGSRVMFLSGHPGALQLYTVNTDGSQLQRVTHE EEEECCCCCEEEEEECCCCCCCCEEEECCCEEEEEECCCCEEEEEEECCCHHHHHHHHCC PSGVTQGAMSDDGKAAWYFAGDARLYRMNLDTGEAHLRMAAPPQIGDPFPIAPGSTYALS CCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEE GTGFSDPVFTAGYPLPRSLGGVSVSVNGVLAALYTVAPQQILFQAPWDTVTPATLEVHAA CCCCCCCCEECCCCCCCCCCCEEEEHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEC STSPFEPKLQFQTTAAPSLPAILLAIHEDWSGLVTATEPARSGEILHLYGTGFGPVDSQQ CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCHH LDGVPAPADPPAHTQLPVTCSDTATSQAIPVLFAGLAPNLVGYYQLDLQLFHFYDGVTRL CCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCEEEEEEEEEEEEEEECCEEEE TLECDTSGHKITVTIPAV EEEECCCCCEEEEEECCC >Mature Secondary Structure MRILPAVLLAVSAAAAQTGIFDLSTSGDGSIAFFSTALTPKGAVASAQAVLPPTLRIYRA CCCHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCCCCCCCCCCEECCCEEEEEEC DSAGVQLYLERHRVDPPANTPMGQFSLSNYYSLGRPEASRDGSVTVVTGQCQCVGGAHCI CCCCEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEECCEEEECCHHHH NAALFQASVGNRNYPGKGRLSGNGRYLFTYGANNTPGFYASIIDLQTGDTYDRAPDNPEH HHHHEEECCCCCCCCCCCEECCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCC APGAGRVVADDGTVAYMDFDLTLLTPVSVQRVPLHFPNSGGAVIDRAARMVVYVNQGSIR CCCCCEEEECCCEEEEEEEEEEEECCCCEEEEEEECCCCCCHHHCCCEEEEEEEECCCEE IYRIAEQQDALLAAVPDSDSSAPYLAADGSRVMFLSGHPGALQLYTVNTDGSQLQRVTHE EEEECCCCCEEEEEECCCCCCCCEEEECCCEEEEEECCCCEEEEEEECCCHHHHHHHHCC PSGVTQGAMSDDGKAAWYFAGDARLYRMNLDTGEAHLRMAAPPQIGDPFPIAPGSTYALS CCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEE GTGFSDPVFTAGYPLPRSLGGVSVSVNGVLAALYTVAPQQILFQAPWDTVTPATLEVHAA CCCCCCCCEECCCCCCCCCCCEEEEHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEC STSPFEPKLQFQTTAAPSLPAILLAIHEDWSGLVTATEPARSGEILHLYGTGFGPVDSQQ CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCHH LDGVPAPADPPAHTQLPVTCSDTATSQAIPVLFAGLAPNLVGYYQLDLQLFHFYDGVTRL CCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCEEEEEEEEEEEEEEECCEEEE TLECDTSGHKITVTIPAV EEEECCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA