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The map label for this gene is xylS [H]

Identifier: 116620915

GI number: 116620915

Start: 2234538

End: 2236700

Strand: Direct

Name: xylS [H]

Synonym: Acid_1796

Alternate gene names: 116620915

Gene position: 2234538-2236700 (Clockwise)

Preceding gene: 116620914

Following gene: 116620916

Centisome position: 22.42

GC content: 64.59

Gene sequence:

>2163_bases
ATGAGCCAACAACTGAATCGCAGGCAATTACTCAGTGCGGCGCTACTCGGCGGAGTGCGCGCCGTCGCGGCGCCCGGCGA
TATCGAGGTGCGGATCTCGCAGGTCAGCCCCCACACCTTCCGTGTCACCATCGGCGGCGATCCGCCGGACGACGGCGCGC
TCGTGCAGTCCTCCTGGGGCGCAACGCTCGCCACGCTTCGCGGCGCCTTCGCCGCACAGGCCGTGAAGGCCGGGGGCGTC
GTGATCAAGGCCAGTTCCAACCCGATCGCCTTCGCCATCGAAACCGGGAAAGGCGAGGCGGTGCAGCACCTCAAGCTCGA
TCCCGATACAGGCGCCCTCTCCTTCACCGCCGGCAGCGCGCCGCTGCTCGCGCTCGGCGAAGGCGGCCCGCAGTTCGATC
GGCGCGGCGCCAATATTCCCGGCCGCAGCGGACAGGGCGGCTATCAGCTCCGCACCTTCGGCGGACGCGTTCCCATTCAA
TGGCTCATCGGTACCAGCGGGTGGGCCATGTTCATTCACGCGCCTTATGGCAGCTTCGATCTCACCGGCGCCGAGGCCAA
ATTTCTGCCGCCCTCCAAGGAAGGCGCGCTGCCGCTCGATCTCTTCTTTGTCACCGCCAAAGAGCCCGCGCTCCTGATGG
CGGAGTACGCGCGCATTACCGGCCTTCCCGAACTCCCGCCGCTGTGGAGCTTTGGCTATCAGCAATCCCACCGTACGCTC
GCCAGCCGCGAAGAGATCCTCGCGGAGGCCAAGACCTTCCGCGAAAAGAAGCTCCCCTGCGACACCCTGATCTATCTCGG
CACCGGATTCTGCCCCTCCGGCTGGAACACCAACAACACGGAGTTCACCTGGAACTCCAAGGTCTTCCCGGATCCCAAGG
CGATGCTGGACCAGCTCCACCAGGATCACTTCAAGGTCGCGCTCCATATCGCGTATCCCACTGGAATTCGCGAAATGACC
GGCTCGGTCAAGGATCCCTGCGATCCGCAGCGCCGCGCCGAAACACAGCCCAGCTGCTACTGGGAAATGCACCGTCCGCT
GCTGGCCGCGGGCGCCGATGGCTGGTGGCCCGACGAAGGCGACGCTCTCAACACGCCCTCCCGGCTCACGCGCATTCGCA
TGTACCGGGAGGGCGCGCAGATCGATCGCCCCAACCAGCGCGTCTTCGCGCTCCATCGCAATGGCTATGCCGGCATGCAG
CGCTATGGCGCTTTCCTTTGGTCGGGTGATGTCAGCTCTCTTTGGGAGACCCTGAAGAACCACATCCCGGTCGCCGTCAA
TGTCGGGCTGAGCGGCGTTCCCTATTGGGGCACCGATATCGGCGGCTTCGTGCCCACCAAGGAACTGACGGGCGAACTCT
ACGTGCGCTGGTTCCAGTTCGCCGCCTTCAACACGCTTTTCCGGTCACACGGCCGCACCTGGAAACTGCGCCTGCCCTGG
GGCTGGAACACCGGCGAGACCGGACCCGTCGAGACTCCCAACGTGCCGCTCGACCCCAAGGAACTGCACAACGCCGCGAT
TGAGCCCATCTGCCGCAAGTACCTCGAACTGCGCTACCGCATGATGCCCTACCTGTATAGTGCCGTCCGCGAAGCCACGG
TCAGCGGCATGCCTGTGCTGCGCTCGATGTGGCTGCACTATCCCGACGACCCGGCCGCCGTATCGCGCGGCGACCAATAC
CTGTGGGGACGCGACGTGCTGGTCGCTCCCGTGGTGGAGCAGGGCGCCACCTCGCGCAAACTCTACCTGCCCCGCGGCAA
CTGGTACGATTTCTGGAACAACAAGCGCCTCGAAGGAGGCCGCGAAATCACTCGCGCCGTCGATCTAGAGACTACGCCGC
TCTACGTGCGCTCCGGCGCCATCATTCCGATGGGTCCCGTCAAACAGTACACTGCCGAGAAGGTAGATGCGCCGTTGAGC
GTGACCGTCTATCCCGGCGCCAACGGCAGTTTCCTCCTCTATGACGACGATGGCGAGACCTTCAACTACCGCAAAGGCGA
GTGGATGGGCCTGCAATTGGCGTGGAACGACGCCCGCAGGTCTCTCTCCATCCAACTCGCGCCGGGCTCCAAAGTTCTCG
GCGATCGCGATCTCGAAATCAAATCCGGGGCCGCCACCAAGCGAGCAACCTTCCGCGGACGCCCCCTCGAAATACGCATG
TAA

Upstream 100 bases:

>100_bases
TCCTCATCGTCCAGGGCACCGGAAATGACAACGTTCATTTTCAGGGCTGTCGCAATAACTCGAACAACACTTGCCCGCTG
GAGGGCGATAGGAAGGCACC

Downstream 100 bases:

>100_bases
TCTATAATCGCGATCATGCGCCGCTACTTTGTGTGTGCCCTGTTCGTTTCCGTGGCATACGCCCAGACCAACGCCGATCT
GCAAGAACAGGTCCGCAAGA

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 720; Mature: 719

Protein sequence:

>720_residues
MSQQLNRRQLLSAALLGGVRAVAAPGDIEVRISQVSPHTFRVTIGGDPPDDGALVQSSWGATLATLRGAFAAQAVKAGGV
VIKASSNPIAFAIETGKGEAVQHLKLDPDTGALSFTAGSAPLLALGEGGPQFDRRGANIPGRSGQGGYQLRTFGGRVPIQ
WLIGTSGWAMFIHAPYGSFDLTGAEAKFLPPSKEGALPLDLFFVTAKEPALLMAEYARITGLPELPPLWSFGYQQSHRTL
ASREEILAEAKTFREKKLPCDTLIYLGTGFCPSGWNTNNTEFTWNSKVFPDPKAMLDQLHQDHFKVALHIAYPTGIREMT
GSVKDPCDPQRRAETQPSCYWEMHRPLLAAGADGWWPDEGDALNTPSRLTRIRMYREGAQIDRPNQRVFALHRNGYAGMQ
RYGAFLWSGDVSSLWETLKNHIPVAVNVGLSGVPYWGTDIGGFVPTKELTGELYVRWFQFAAFNTLFRSHGRTWKLRLPW
GWNTGETGPVETPNVPLDPKELHNAAIEPICRKYLELRYRMMPYLYSAVREATVSGMPVLRSMWLHYPDDPAAVSRGDQY
LWGRDVLVAPVVEQGATSRKLYLPRGNWYDFWNNKRLEGGREITRAVDLETTPLYVRSGAIIPMGPVKQYTAEKVDAPLS
VTVYPGANGSFLLYDDDGETFNYRKGEWMGLQLAWNDARRSLSIQLAPGSKVLGDRDLEIKSGAATKRATFRGRPLEIRM

Sequences:

>Translated_720_residues
MSQQLNRRQLLSAALLGGVRAVAAPGDIEVRISQVSPHTFRVTIGGDPPDDGALVQSSWGATLATLRGAFAAQAVKAGGV
VIKASSNPIAFAIETGKGEAVQHLKLDPDTGALSFTAGSAPLLALGEGGPQFDRRGANIPGRSGQGGYQLRTFGGRVPIQ
WLIGTSGWAMFIHAPYGSFDLTGAEAKFLPPSKEGALPLDLFFVTAKEPALLMAEYARITGLPELPPLWSFGYQQSHRTL
ASREEILAEAKTFREKKLPCDTLIYLGTGFCPSGWNTNNTEFTWNSKVFPDPKAMLDQLHQDHFKVALHIAYPTGIREMT
GSVKDPCDPQRRAETQPSCYWEMHRPLLAAGADGWWPDEGDALNTPSRLTRIRMYREGAQIDRPNQRVFALHRNGYAGMQ
RYGAFLWSGDVSSLWETLKNHIPVAVNVGLSGVPYWGTDIGGFVPTKELTGELYVRWFQFAAFNTLFRSHGRTWKLRLPW
GWNTGETGPVETPNVPLDPKELHNAAIEPICRKYLELRYRMMPYLYSAVREATVSGMPVLRSMWLHYPDDPAAVSRGDQY
LWGRDVLVAPVVEQGATSRKLYLPRGNWYDFWNNKRLEGGREITRAVDLETTPLYVRSGAIIPMGPVKQYTAEKVDAPLS
VTVYPGANGSFLLYDDDGETFNYRKGEWMGLQLAWNDARRSLSIQLAPGSKVLGDRDLEIKSGAATKRATFRGRPLEIRM
>Mature_719_residues
SQQLNRRQLLSAALLGGVRAVAAPGDIEVRISQVSPHTFRVTIGGDPPDDGALVQSSWGATLATLRGAFAAQAVKAGGVV
IKASSNPIAFAIETGKGEAVQHLKLDPDTGALSFTAGSAPLLALGEGGPQFDRRGANIPGRSGQGGYQLRTFGGRVPIQW
LIGTSGWAMFIHAPYGSFDLTGAEAKFLPPSKEGALPLDLFFVTAKEPALLMAEYARITGLPELPPLWSFGYQQSHRTLA
SREEILAEAKTFREKKLPCDTLIYLGTGFCPSGWNTNNTEFTWNSKVFPDPKAMLDQLHQDHFKVALHIAYPTGIREMTG
SVKDPCDPQRRAETQPSCYWEMHRPLLAAGADGWWPDEGDALNTPSRLTRIRMYREGAQIDRPNQRVFALHRNGYAGMQR
YGAFLWSGDVSSLWETLKNHIPVAVNVGLSGVPYWGTDIGGFVPTKELTGELYVRWFQFAAFNTLFRSHGRTWKLRLPWG
WNTGETGPVETPNVPLDPKELHNAAIEPICRKYLELRYRMMPYLYSAVREATVSGMPVLRSMWLHYPDDPAAVSRGDQYL
WGRDVLVAPVVEQGATSRKLYLPRGNWYDFWNNKRLEGGREITRAVDLETTPLYVRSGAIIPMGPVKQYTAEKVDAPLSV
TVYPGANGSFLLYDDDGETFNYRKGEWMGLQLAWNDARRSLSIQLAPGSKVLGDRDLEIKSGAATKRATFRGRPLEIRM

Specific function: Catalyzes the liberation of alpha-xylose from the non- reducing terminal glucose of xyloglucan oligosaccharides. Has high hydrolytic activity on the disaccharide isoprimeverose. Follows a retaining mechanism of substrate hydrolysis [H]

COG id: COG1501

COG function: function code G; Alpha-glucosidases, family 31 of glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 31 family [H]

Homologues:

Organism=Homo sapiens, GI38202257, Length=527, Percent_Identity=29.0322580645161, Blast_Score=188, Evalue=2e-47,
Organism=Homo sapiens, GI88900491, Length=527, Percent_Identity=29.0322580645161, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI66346737, Length=285, Percent_Identity=34.0350877192982, Blast_Score=154, Evalue=3e-37,
Organism=Homo sapiens, GI119393895, Length=296, Percent_Identity=30.4054054054054, Blast_Score=126, Evalue=8e-29,
Organism=Homo sapiens, GI119393893, Length=296, Percent_Identity=30.4054054054054, Blast_Score=126, Evalue=8e-29,
Organism=Homo sapiens, GI119393891, Length=296, Percent_Identity=30.4054054054054, Blast_Score=126, Evalue=8e-29,
Organism=Homo sapiens, GI157364974, Length=291, Percent_Identity=30.9278350515464, Blast_Score=117, Evalue=4e-26,
Organism=Homo sapiens, GI221316699, Length=295, Percent_Identity=29.8305084745763, Blast_Score=106, Evalue=7e-23,
Organism=Homo sapiens, GI310115361, Length=239, Percent_Identity=30.1255230125523, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI153791946, Length=210, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI2367256, Length=548, Percent_Identity=24.4525547445255, Blast_Score=154, Evalue=2e-38,
Organism=Escherichia coli, GI2367323, Length=334, Percent_Identity=27.2455089820359, Blast_Score=114, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71991189, Length=533, Percent_Identity=25.891181988743, Blast_Score=159, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI17560798, Length=339, Percent_Identity=27.4336283185841, Blast_Score=128, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17560800, Length=339, Percent_Identity=27.4336283185841, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI32563849, Length=313, Percent_Identity=28.1150159744409, Blast_Score=125, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI71985706, Length=281, Percent_Identity=29.8932384341637, Blast_Score=110, Evalue=3e-24,
Organism=Saccharomyces cerevisiae, GI6319706, Length=302, Percent_Identity=28.476821192053, Blast_Score=133, Evalue=8e-32,
Organism=Drosophila melanogaster, GI24643749, Length=328, Percent_Identity=28.9634146341463, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24643753, Length=328, Percent_Identity=28.9634146341463, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24643751, Length=328, Percent_Identity=28.9634146341463, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24643746, Length=328, Percent_Identity=28.9634146341463, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI21357605, Length=328, Percent_Identity=28.9634146341463, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI28571438, Length=392, Percent_Identity=22.7040816326531, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571440, Length=392, Percent_Identity=22.7040816326531, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24650054, Length=201, Percent_Identity=28.3582089552239, Blast_Score=71, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011013
- InterPro:   IPR000322
- InterPro:   IPR017853 [H]

Pfam domain/function: PF01055 Glyco_hydro_31 [H]

EC number: NA

Molecular weight: Translated: 79715; Mature: 79583

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQQLNRRQLLSAALLGGVRAVAAPGDIEVRISQVSPHTFRVTIGGDPPDDGALVQSSWG
CCCCHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCEEEEEEECCCCCCCCCEEECCCC
ATLATLRGAFAAQAVKAGGVVIKASSNPIAFAIETGKGEAVQHLKLDPDTGALSFTAGSA
HHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCC
PLLALGEGGPQFDRRGANIPGRSGQGGYQLRTFGGRVPIQWLIGTSGWAMFIHAPYGSFD
CEEEECCCCCCHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEE
LTGAEAKFLPPSKEGALPLDLFFVTAKEPALLMAEYARITGLPELPPLWSFGYQQSHRTL
CCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHH
ASREEILAEAKTFREKKLPCDTLIYLGTGFCPSGWNTNNTEFTWNSKVFPDPKAMLDQLH
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHC
QDHFKVALHIAYPTGIREMTGSVKDPCDPQRRAETQPSCYWEMHRPLLAAGADGWWPDEG
CCCEEEEEEEECCCCHHHHCCCCCCCCCHHHHCCCCCCEEHHHCCCEEEECCCCCCCCCC
DALNTPSRLTRIRMYREGAQIDRPNQRVFALHRNGYAGMQRYGAFLWSGDVSSLWETLKN
CCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHCEEEECCCHHHHHHHHHC
HIPVAVNVGLSGVPYWGTDIGGFVPTKELTGELYVRWFQFAAFNTLFRSHGRTWKLRLPW
CCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
GWNTGETGPVETPNVPLDPKELHNAAIEPICRKYLELRYRMMPYLYSAVREATVSGMPVL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
RSMWLHYPDDPAAVSRGDQYLWGRDVLVAPVVEQGATSRKLYLPRGNWYDFWNNKRLEGG
HHHHCCCCCCCHHHCCCCCEEECCCEEEEEHHHCCCCCCEEEECCCCEECCCCCCCCCCC
REITRAVDLETTPLYVRSGAIIPMGPVKQYTAEKVDAPLSVTVYPGANGSFLLYDDDGET
HHHHHEECCCCCCEEEECCCEECCCCCHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCE
FNYRKGEWMGLQLAWNDARRSLSIQLAPGSKVLGDRDLEIKSGAATKRATFRGRPLEIRM
ECCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure 
SQQLNRRQLLSAALLGGVRAVAAPGDIEVRISQVSPHTFRVTIGGDPPDDGALVQSSWG
CCCHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCEEEEEEECCCCCCCCCEEECCCC
ATLATLRGAFAAQAVKAGGVVIKASSNPIAFAIETGKGEAVQHLKLDPDTGALSFTAGSA
HHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCC
PLLALGEGGPQFDRRGANIPGRSGQGGYQLRTFGGRVPIQWLIGTSGWAMFIHAPYGSFD
CEEEECCCCCCHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEE
LTGAEAKFLPPSKEGALPLDLFFVTAKEPALLMAEYARITGLPELPPLWSFGYQQSHRTL
CCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHH
ASREEILAEAKTFREKKLPCDTLIYLGTGFCPSGWNTNNTEFTWNSKVFPDPKAMLDQLH
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHC
QDHFKVALHIAYPTGIREMTGSVKDPCDPQRRAETQPSCYWEMHRPLLAAGADGWWPDEG
CCCEEEEEEEECCCCHHHHCCCCCCCCCHHHHCCCCCCEEHHHCCCEEEECCCCCCCCCC
DALNTPSRLTRIRMYREGAQIDRPNQRVFALHRNGYAGMQRYGAFLWSGDVSSLWETLKN
CCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHCEEEECCCHHHHHHHHHC
HIPVAVNVGLSGVPYWGTDIGGFVPTKELTGELYVRWFQFAAFNTLFRSHGRTWKLRLPW
CCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
GWNTGETGPVETPNVPLDPKELHNAAIEPICRKYLELRYRMMPYLYSAVREATVSGMPVL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
RSMWLHYPDDPAAVSRGDQYLWGRDVLVAPVVEQGATSRKLYLPRGNWYDFWNNKRLEGG
HHHHCCCCCCCHHHCCCCCEEECCCEEEEEHHHCCCCCCEEEECCCCEECCCCCCCCCCC
REITRAVDLETTPLYVRSGAIIPMGPVKQYTAEKVDAPLSVTVYPGANGSFLLYDDDGET
HHHHHEECCCCCCEEEECCCEECCCCCHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCE
FNYRKGEWMGLQLAWNDARRSLSIQLAPGSKVLGDRDLEIKSGAATKRATFRGRPLEIRM
ECCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10801892; 11427726 [H]