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The map label for this gene is 116620908

Identifier: 116620908

GI number: 116620908

Start: 2226856

End: 2227344

Strand: Direct

Name: 116620908

Synonym: Acid_1789

Alternate gene names: NA

Gene position: 2226856-2227344 (Clockwise)

Preceding gene: 116620905

Following gene: 116620909

Centisome position: 22.35

GC content: 60.74

Gene sequence:

>489_bases
GTGATCATCAAGAAATACCCCAACCGCCGCCTTTACAACACATCCTCCAGGGCTTACGTAAATCTCAACGAAATCGCCGC
CCTCATCCGTAAGGGCCAGGACGTTCAGGTCGTCGATGCACGCAGCGGCGAAGACCTTACCCGCGTCGTCCTTACCCAGA
TCATCGTCGAGGATGCCAAGGACGCCCCCACCGGCCTGCCGCTCGAGCTGCTGCGCCAGTTGATTATGGCGAGCGACCGC
GCCGGCCAGGAATTTATCATGTGGTATCTGAAGTCGGCCTTCGATACCTACGAAAAAGTACAGGGCGCTGTGCAAAGCCG
CCTTCAGGATGTCCGGTCGGCCGCGCTTTCGCCCTTGAGCCTGATGAAGAATCTGCTCACCCCGCCTGCCGAACCCCAGG
CGGAAAGTGAGCTGGAGCAGCTCCGCCGCCGTGTGGCGGAACTGGAACAGCGCCAAAAACCTCGGGCCCGCGCCAAACGC
AAGCCCTGA

Upstream 100 bases:

>100_bases
GCAGCATGCACCATAAATATAGACCTAAAGGTCTTTTTATGTCAATATAAAGTTGGCAGGACGCAGCGCAGCAAAAGTCC
GGCGAGAGAATAGGCCTTAA

Downstream 100 bases:

>100_bases
AGAAGGAGTGCGATGGAAACCGCATCGCCCGCCGGTATCGACCTGGGAGCACTCGCGCCCTGGGCCGCCCTCTTCTCCGC
CCTCGATTCCCCCGCCCGCA

Product: PHA accumulation regulator DNA-binding protein

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MIIKKYPNRRLYNTSSRAYVNLNEIAALIRKGQDVQVVDARSGEDLTRVVLTQIIVEDAKDAPTGLPLELLRQLIMASDR
AGQEFIMWYLKSAFDTYEKVQGAVQSRLQDVRSAALSPLSLMKNLLTPPAEPQAESELEQLRRRVAELEQRQKPRARAKR
KP

Sequences:

>Translated_162_residues
MIIKKYPNRRLYNTSSRAYVNLNEIAALIRKGQDVQVVDARSGEDLTRVVLTQIIVEDAKDAPTGLPLELLRQLIMASDR
AGQEFIMWYLKSAFDTYEKVQGAVQSRLQDVRSAALSPLSLMKNLLTPPAEPQAESELEQLRRRVAELEQRQKPRARAKR
KP
>Mature_162_residues
MIIKKYPNRRLYNTSSRAYVNLNEIAALIRKGQDVQVVDARSGEDLTRVVLTQIIVEDAKDAPTGLPLELLRQLIMASDR
AGQEFIMWYLKSAFDTYEKVQGAVQSRLQDVRSAALSPLSLMKNLLTPPAEPQAESELEQLRRRVAELEQRQKPRARAKR
KP

Specific function: Unknown

COG id: COG5394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012909
- InterPro:   IPR010134
- InterPro:   IPR007897 [H]

Pfam domain/function: PF05233 PHB_acc; PF07879 PHB_acc_N [H]

EC number: NA

Molecular weight: Translated: 18459; Mature: 18459

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIKKYPNRRLYNTSSRAYVNLNEIAALIRKGQDVQVVDARSGEDLTRVVLTQIIVEDAK
CCCCCCCCCCCCCCCCCCEECHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCC
DAPTGLPLELLRQLIMASDRAGQEFIMWYLKSAFDTYEKVQGAVQSRLQDVRSAALSPLS
CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LMKNLLTPPAEPQAESELEQLRRRVAELEQRQKPRARAKRKP
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCC
>Mature Secondary Structure
MIIKKYPNRRLYNTSSRAYVNLNEIAALIRKGQDVQVVDARSGEDLTRVVLTQIIVEDAK
CCCCCCCCCCCCCCCCCCEECHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCC
DAPTGLPLELLRQLIMASDRAGQEFIMWYLKSAFDTYEKVQGAVQSRLQDVRSAALSPLS
CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LMKNLLTPPAEPQAESELEQLRRRVAELEQRQKPRARAKRKP
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1396692 [H]