| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620882
Identifier: 116620882
GI number: 116620882
Start: 2190298
End: 2191560
Strand: Direct
Name: 116620882
Synonym: Acid_1763
Alternate gene names: NA
Gene position: 2190298-2191560 (Clockwise)
Preceding gene: 116620881
Following gene: 116620883
Centisome position: 21.98
GC content: 61.6
Gene sequence:
>1263_bases GTGAAGGATACGGGCAAACGGCCGCTGGCATTTTGCTTCAACGGCGGGCCAGGGTCGGCGAGCGTGTGGGTGCACATGGG CGCGATGGGGCCGCGCAGTCCGCGGCTGATGCCGAACGGGAGCATGCCGCCGCCGCCCTACCAGCTGCGCGATAACCCGA ACACGTGGCTGGACCAGGCGGACCTGGTCTTCATCGATCCGGTGGGCACGGGGTATAGCCGGGCGAAGACGGTGGAGATC GCGCGGCGCATGAATGGCGTGCAGGGCGATTTGCAATCGGTGGGCGAGTTCATCCGGATGTACGTGACGCGCAACGATCG AACGCTATCGCCGCTGTTCGTGGCGGGCGAGAGCTATGGCACGTTCCGCGCGGCCGGGCTGGCGGGCTACCTGATCGATC GCGGGATCGCGTTCAACGGCGTGGTGCTGATTTCGGCGACGCTCAATCTGGAGACGATCTGGTCGCGGTCGGACGATCTG GTGTACGCGCTCGAGCTGCCGACGTACGCGGCGGACGCCTGGTATCACAAGAAAGTCCCGGCGGATTTGCAGAAGAAGGA CGTGAAGAGCTTCCTCAAGGAAGTGGAAGGCTTCGCGATGGGCGAGTACACGGTAGCGCTCAATAAGGGCGATGCGATTT CGGCGGCGGAGCGCAAGGCGACGATCGATAAGCTGGTGCGCTACACGGGACTGGAAGCGCGCTACATCGACCAGAGCAAT CTCCGGTATGATGTGTCGCACTTTACGCGCGAGCTGCTGCGCGACAAGCACGAGACCATCGGGCGCCTGGACGGGCGGCT CACGGGACCTTCGTCGTTGAACACGGGGGAGACCAGCGAGTTCGACCCGTCGAATACGCTGATCGCTCCGCCATTTCAGG CGGCCTTCACCAATTACGTACGCAGCGAGCTCGGGTACAAGACGGACCTGTACTACTACGTCAGCGGCGGCATTCAGCCG TGGGATTGGGGCGTGCAGAACGGGTTCGGCGATACCACGGCGCTGCTGCGCAACGCGTTCGCGAAGAATCCCTATTTGAA GGTGATGGTGGCAGCAGGGTATTACGACCTGGCGACGCCATATTTCGCGATCGAGCACACGTTCAATCACATGGGGCTGC ATCCGGAGATGCACAAGAATGTGATCTGGAATTACTACCAGGCGGGTCACATGCTGTACATCGACAGCGATTCGAGCGTG AAGCTCAAGCACGATATTTCCGAGTTCATTTCAGGCGCGGTGGCGAAAGAGACGCTGCAATAA
Upstream 100 bases:
>100_bases AGACGCTGGCCTACACGGCGACGGTCGCGCAGATGCCGATCAAGGACGCGGCCGGTGAGACCGAAGCGCACATCTTCTAC GTGGCCTACAGTTGGATGGC
Downstream 100 bases:
>100_bases CGAGCCGCGACCGTGAGGGAGATTACGGCAGTTGATGTGCGGGGGCCGGTGCGTGACCTTTTTGGAGTAGTTGCGTCCCT ATATGTATAATAGCCACATA
Product: peptidase S10, serine carboxypeptidase
Products: NA
Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; S10 Family Peptidase; Carboxypeptidase; S10 Family Carboxypeptidase; Carboxypeptidase-Like Protein; Serine Carboxypeptidase Superfamily; Peptidase S
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MKDTGKRPLAFCFNGGPGSASVWVHMGAMGPRSPRLMPNGSMPPPPYQLRDNPNTWLDQADLVFIDPVGTGYSRAKTVEI ARRMNGVQGDLQSVGEFIRMYVTRNDRTLSPLFVAGESYGTFRAAGLAGYLIDRGIAFNGVVLISATLNLETIWSRSDDL VYALELPTYAADAWYHKKVPADLQKKDVKSFLKEVEGFAMGEYTVALNKGDAISAAERKATIDKLVRYTGLEARYIDQSN LRYDVSHFTRELLRDKHETIGRLDGRLTGPSSLNTGETSEFDPSNTLIAPPFQAAFTNYVRSELGYKTDLYYYVSGGIQP WDWGVQNGFGDTTALLRNAFAKNPYLKVMVAAGYYDLATPYFAIEHTFNHMGLHPEMHKNVIWNYYQAGHMLYIDSDSSV KLKHDISEFISGAVAKETLQ
Sequences:
>Translated_420_residues MKDTGKRPLAFCFNGGPGSASVWVHMGAMGPRSPRLMPNGSMPPPPYQLRDNPNTWLDQADLVFIDPVGTGYSRAKTVEI ARRMNGVQGDLQSVGEFIRMYVTRNDRTLSPLFVAGESYGTFRAAGLAGYLIDRGIAFNGVVLISATLNLETIWSRSDDL VYALELPTYAADAWYHKKVPADLQKKDVKSFLKEVEGFAMGEYTVALNKGDAISAAERKATIDKLVRYTGLEARYIDQSN LRYDVSHFTRELLRDKHETIGRLDGRLTGPSSLNTGETSEFDPSNTLIAPPFQAAFTNYVRSELGYKTDLYYYVSGGIQP WDWGVQNGFGDTTALLRNAFAKNPYLKVMVAAGYYDLATPYFAIEHTFNHMGLHPEMHKNVIWNYYQAGHMLYIDSDSSV KLKHDISEFISGAVAKETLQ >Mature_420_residues MKDTGKRPLAFCFNGGPGSASVWVHMGAMGPRSPRLMPNGSMPPPPYQLRDNPNTWLDQADLVFIDPVGTGYSRAKTVEI ARRMNGVQGDLQSVGEFIRMYVTRNDRTLSPLFVAGESYGTFRAAGLAGYLIDRGIAFNGVVLISATLNLETIWSRSDDL VYALELPTYAADAWYHKKVPADLQKKDVKSFLKEVEGFAMGEYTVALNKGDAISAAERKATIDKLVRYTGLEARYIDQSN LRYDVSHFTRELLRDKHETIGRLDGRLTGPSSLNTGETSEFDPSNTLIAPPFQAAFTNYVRSELGYKTDLYYYVSGGIQP WDWGVQNGFGDTTALLRNAFAKNPYLKVMVAAGYYDLATPYFAIEHTFNHMGLHPEMHKNVIWNYYQAGHMLYIDSDSSV KLKHDISEFISGAVAKETLQ
Specific function: Unknown
COG id: COG2939
COG function: function code E; Carboxypeptidase C (cathepsin A)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46858; Mature: 46858
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDTGKRPLAFCFNGGPGSASVWVHMGAMGPRSPRLMPNGSMPPPPYQLRDNPNTWLDQA CCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DLVFIDPVGTGYSRAKTVEIARRMNGVQGDLQSVGEFIRMYVTRNDRTLSPLFVAGESYG CEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCCCCCEEEEECCCCC TFRAAGLAGYLIDRGIAFNGVVLISATLNLETIWSRSDDLVYALELPTYAADAWYHKKVP CCHHHHHHHHHHHCCCEECCEEEEEEEECEEEEECCCCCEEEEEECCCHHCCCHHHCCCC ADLQKKDVKSFLKEVEGFAMGEYTVALNKGDAISAAERKATIDKLVRYTGLEARYIDQSN CCHHHHHHHHHHHHHCCCEECEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCC LRYDVSHFTRELLRDKHETIGRLDGRLTGPSSLNTGETSEFDPSNTLIAPPFQAAFTNYV CEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHH RSELGYKTDLYYYVSGGIQPWDWGVQNGFGDTTALLRNAFAKNPYLKVMVAAGYYDLATP HHHCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHCCC YFAIEHTFNHMGLHPEMHKNVIWNYYQAGHMLYIDSDSSVKLKHDISEFISGAVAKETLQ EEEEEHHHHHCCCCHHHHHHHHHHEECCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKDTGKRPLAFCFNGGPGSASVWVHMGAMGPRSPRLMPNGSMPPPPYQLRDNPNTWLDQA CCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DLVFIDPVGTGYSRAKTVEIARRMNGVQGDLQSVGEFIRMYVTRNDRTLSPLFVAGESYG CEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCCCCCEEEEECCCCC TFRAAGLAGYLIDRGIAFNGVVLISATLNLETIWSRSDDLVYALELPTYAADAWYHKKVP CCHHHHHHHHHHHCCCEECCEEEEEEEECEEEEECCCCCEEEEEECCCHHCCCHHHCCCC ADLQKKDVKSFLKEVEGFAMGEYTVALNKGDAISAAERKATIDKLVRYTGLEARYIDQSN CCHHHHHHHHHHHHHCCCEECEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCC LRYDVSHFTRELLRDKHETIGRLDGRLTGPSSLNTGETSEFDPSNTLIAPPFQAAFTNYV CEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHH RSELGYKTDLYYYVSGGIQPWDWGVQNGFGDTTALLRNAFAKNPYLKVMVAAGYYDLATP HHHCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHCCC YFAIEHTFNHMGLHPEMHKNVIWNYYQAGHMLYIDSDSSVKLKHDISEFISGAVAKETLQ EEEEEHHHHHCCCCHHHHHHHHHHEECCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA