| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620872
Identifier: 116620872
GI number: 116620872
Start: 2181135
End: 2182646
Strand: Reverse
Name: 116620872
Synonym: Acid_1753
Alternate gene names: NA
Gene position: 2182646-2181135 (Counterclockwise)
Preceding gene: 116620874
Following gene: 116620870
Centisome position: 21.9
GC content: 63.1
Gene sequence:
>1512_bases GTGGGAACTCTGGTCCGAGAGGCAAGGCGCCGCATCTTAAGGAACGAACTGCTCGCTCAGGGAGCGACAGCCGGAAGTAT CACCCTCGCCGCCCTCATCCTGCTGCTTCTTCTTGGTACTCAGATTCTCAGTTGGCAGATCATCGCAGCAGTCCCCCTGC TTGCCGCCGCGATAGGGATTTATCGCATCAGGAAGCGGCTTCCCGCGCCCTATGCCGTCGCTCAACTCGTGGATCGACGC CTGGATCTCGCCGACCATCTCTCCACCGCGCTCTTCTTCAGTGAAGTTGCGCCCGGCGCGCCGGTTCGCGAAGATGTCCG TCGCGCGCAGTTCGAAAGCGCCGGACGCATCGCGCAGAGCGTGGACGTCCGTCTCGCCGTGCCCTACCGGATGCCGCGCG GACTTTACGTAATGGCCGCGCTTCTCGTGGTCGCCGGCAGCCTGTTCGCGCTGCGCTACGGCCTTTCGCGCCGTCTCGAT CTCAAGCAGCCCCTGGCCAACTTCCTTCCCGAATCGCTCGCCGGCGGCAAGACCGTGCGCCAGGCCAACAACGCACGCCG TAATCCCAAACAGATTCCCGAAACGCCCGATGAGGGCAACGGCGCCGAAGACAAGGACCAGAAGGGGCCGGGACAGCAGG ACCCCAACCAGGAAATGCAAACCGCCGGCGAACCCGAATCCAAAGCCGACGCCAAGACCGAATCCAAATCCATGCCCGGC CAGAAATCGGCGGACCAGCAGGGCGACAACCAGATGGCCTCCGACGACCAGGAGGACGCGCAGAGCGATGCCAGCGGCGG CAAGGCCGGCGACGAAAACCAGAGCGGGCAGCAGGGCGAGAGCAAGTCCGGTCAATCGGAAAAGCAGCAAAACGGCAAGC AGGAATCGGCCAACAACGAGAATTCCAGCTTGATGAGCAAGATGAAAGATGCCTTCCACAACCTGATGTCGAAGGTGAAG CCGCAGCAGAACCAGCAGGGCGCGCCGCAGCAGGGAAACCAGGAACAGAACTCGCGCCAGGGCAAGCCGCAACAGGGACA GAAGGGCCAGAACAATAAGGACGGCCAGCAGCAGTCCGGCAATCAGCAGGGCGATGCCCAGGAAGGCGAGGACGGCCAGG AGGCCAAGAACTCCGAGAACGCCCAGCAGGGCAAAGGCCAGGGCAAGAGCGATTCGCAGCAGACCAGCAAGCAGCCCGGG AGCGGCATCGGCAGCCAGGACGGCGATAAGGCCATCAAGAACGCCGAGCAGCTCGCAGCCATGGGCAAGATCAGCGAGAT CCTCGGCAAACGCTCCGCCACTATCAGCGGCGAAGCCACCGTCGAGGTGCAATCCACCAGCCAGCAGTTGCACACGCCTT ACGCCCAGAAAGGCGCGCAACACACGCAGGGCGGCGCCGAAATCAGCCGCGACGAAGTTCCGGTATCACTCCAACCCTAC GTGCAGCAGTATTTCGAACAGTTGCGCAAGCAGTCCGCCCCCGCGCCTGCCGCCCCATCTGTGAAGAAGTAA
Upstream 100 bases:
>100_bases TCTCCGGACCACCCTGTGGGAGATGCTAAGATTGAGGTGAAAGCTAGCGTTTCGGGACCAGCGCGTTCCGAAAATGGTGC GGAAACGCACGAGGGGCGAT
Downstream 100 bases:
>100_bases TCTGAGCCGAGCGCGGATAGGGAGCGATCGCTCTCTATTCCCAAATCCGCTTGGGCACGCCGCGATCCCGATCCTTCACG CGGTCGTATTGATACAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 503; Mature: 502
Protein sequence:
>503_residues MGTLVREARRRILRNELLAQGATAGSITLAALILLLLLGTQILSWQIIAAVPLLAAAIGIYRIRKRLPAPYAVAQLVDRR LDLADHLSTALFFSEVAPGAPVREDVRRAQFESAGRIAQSVDVRLAVPYRMPRGLYVMAALLVVAGSLFALRYGLSRRLD LKQPLANFLPESLAGGKTVRQANNARRNPKQIPETPDEGNGAEDKDQKGPGQQDPNQEMQTAGEPESKADAKTESKSMPG QKSADQQGDNQMASDDQEDAQSDASGGKAGDENQSGQQGESKSGQSEKQQNGKQESANNENSSLMSKMKDAFHNLMSKVK PQQNQQGAPQQGNQEQNSRQGKPQQGQKGQNNKDGQQQSGNQQGDAQEGEDGQEAKNSENAQQGKGQGKSDSQQTSKQPG SGIGSQDGDKAIKNAEQLAAMGKISEILGKRSATISGEATVEVQSTSQQLHTPYAQKGAQHTQGGAEISRDEVPVSLQPY VQQYFEQLRKQSAPAPAAPSVKK
Sequences:
>Translated_503_residues MGTLVREARRRILRNELLAQGATAGSITLAALILLLLLGTQILSWQIIAAVPLLAAAIGIYRIRKRLPAPYAVAQLVDRR LDLADHLSTALFFSEVAPGAPVREDVRRAQFESAGRIAQSVDVRLAVPYRMPRGLYVMAALLVVAGSLFALRYGLSRRLD LKQPLANFLPESLAGGKTVRQANNARRNPKQIPETPDEGNGAEDKDQKGPGQQDPNQEMQTAGEPESKADAKTESKSMPG QKSADQQGDNQMASDDQEDAQSDASGGKAGDENQSGQQGESKSGQSEKQQNGKQESANNENSSLMSKMKDAFHNLMSKVK PQQNQQGAPQQGNQEQNSRQGKPQQGQKGQNNKDGQQQSGNQQGDAQEGEDGQEAKNSENAQQGKGQGKSDSQQTSKQPG SGIGSQDGDKAIKNAEQLAAMGKISEILGKRSATISGEATVEVQSTSQQLHTPYAQKGAQHTQGGAEISRDEVPVSLQPY VQQYFEQLRKQSAPAPAAPSVKK >Mature_502_residues GTLVREARRRILRNELLAQGATAGSITLAALILLLLLGTQILSWQIIAAVPLLAAAIGIYRIRKRLPAPYAVAQLVDRRL DLADHLSTALFFSEVAPGAPVREDVRRAQFESAGRIAQSVDVRLAVPYRMPRGLYVMAALLVVAGSLFALRYGLSRRLDL KQPLANFLPESLAGGKTVRQANNARRNPKQIPETPDEGNGAEDKDQKGPGQQDPNQEMQTAGEPESKADAKTESKSMPGQ KSADQQGDNQMASDDQEDAQSDASGGKAGDENQSGQQGESKSGQSEKQQNGKQESANNENSSLMSKMKDAFHNLMSKVKP QQNQQGAPQQGNQEQNSRQGKPQQGQKGQNNKDGQQQSGNQQGDAQEGEDGQEAKNSENAQQGKGQGKSDSQQTSKQPGS GIGSQDGDKAIKNAEQLAAMGKISEILGKRSATISGEATVEVQSTSQQLHTPYAQKGAQHTQGGAEISRDEVPVSLQPYV QQYFEQLRKQSAPAPAAPSVKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53959; Mature: 53828
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTLVREARRRILRNELLAQGATAGSITLAALILLLLLGTQILSWQIIAAVPLLAAAIGI CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRIRKRLPAPYAVAQLVDRRLDLADHLSTALFFSEVAPGAPVREDVRRAQFESAGRIAQS HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH VDVRLAVPYRMPRGLYVMAALLVVAGSLFALRYGLSRRLDLKQPLANFLPESLAGGKTVR CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHH QANNARRNPKQIPETPDEGNGAEDKDQKGPGQQDPNQEMQTAGEPESKADAKTESKSMPG HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCC QKSADQQGDNQMASDDQEDAQSDASGGKAGDENQSGQQGESKSGQSEKQQNGKQESANNE CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHCCCCH NSSLMSKMKDAFHNLMSKVKPQQNQQGAPQQGNQEQNSRQGKPQQGQKGQNNKDGQQQSG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHCC NQQGDAQEGEDGQEAKNSENAQQGKGQGKSDSQQTSKQPGSGIGSQDGDKAIKNAEQLAA CCCCCCCCCCCCHHHHCCCHHHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHH MGKISEILGKRSATISGEATVEVQSTSQQLHTPYAQKGAQHTQGGAEISRDEVPVSLQPY HHHHHHHHCCCCCCCCCCEEEEEHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHHH VQQYFEQLRKQSAPAPAAPSVKK HHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GTLVREARRRILRNELLAQGATAGSITLAALILLLLLGTQILSWQIIAAVPLLAAAIGI CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRIRKRLPAPYAVAQLVDRRLDLADHLSTALFFSEVAPGAPVREDVRRAQFESAGRIAQS HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH VDVRLAVPYRMPRGLYVMAALLVVAGSLFALRYGLSRRLDLKQPLANFLPESLAGGKTVR CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHH QANNARRNPKQIPETPDEGNGAEDKDQKGPGQQDPNQEMQTAGEPESKADAKTESKSMPG HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCC QKSADQQGDNQMASDDQEDAQSDASGGKAGDENQSGQQGESKSGQSEKQQNGKQESANNE CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHCCCCH NSSLMSKMKDAFHNLMSKVKPQQNQQGAPQQGNQEQNSRQGKPQQGQKGQNNKDGQQQSG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHCC NQQGDAQEGEDGQEAKNSENAQQGKGQGKSDSQQTSKQPGSGIGSQDGDKAIKNAEQLAA CCCCCCCCCCCCHHHHCCCHHHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHH MGKISEILGKRSATISGEATVEVQSTSQQLHTPYAQKGAQHTQGGAEISRDEVPVSLQPY HHHHHHHHCCCCCCCCCCEEEEEHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHHH VQQYFEQLRKQSAPAPAAPSVKK HHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA