| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116620869
Identifier: 116620869
GI number: 116620869
Start: 2176499
End: 2176966
Strand: Reverse
Name: 116620869
Synonym: Acid_1750
Alternate gene names: NA
Gene position: 2176966-2176499 (Counterclockwise)
Preceding gene: 116620870
Following gene: 116620868
Centisome position: 21.84
GC content: 61.75
Gene sequence:
>468_bases ATGTCCCATCACCTCGCCCAGGTCAACATCGGCCGCATACTGCACCCCATTGACGATCCCCGTATGTCTGGCTTCGTCAA CCAGCTCGCGCCCATCAACGCGCTCGCCGATGCCTCCCCGGGTTTCGTCTGGCGCCTGCAATCCTCTTCCGGCAATGCAA CCGACGTCGTCTACAGCGAAGACCCGTTCGTCCTCGTCAATATGTCCGTCTGGGAATCGCTCGAGTCCCTCCGGGACTAC ACCTACAGCCCCCGTCACATCGGCGTTTTCCGCGACCGCGCCCATTGGTTTGAGAAAATGGACAAGCCGAATTACTGCCT GTGGTGGATCCCCGCCGGCCACACCCCCACCGTCCCCGAAGCCCGCGAGCGTCTGGAGCACTACCAAATCCACGGCGCGA CTCCCTACTCCTTCTGGTTCTCCCAACCCTTTCCCGCCCCGTGCGCCGAACCTGCAGTGATAAAGTAG
Upstream 100 bases:
>100_bases GGCATGGACGATCACCTCAGCAAGCCGGTCAGCCTTCGCTCGCTCGCCGCCATCCTCGACCGCTGGTCCATCGCCGCCCG CGAGTCGTAGAATAGTCGGC
Downstream 100 bases:
>100_bases GTCGCATCATGACCCGCATCCCGATTCTCGCGATTCTCTTCGCGGGCGCCGCGCTCGCCCAGGCCGATAAACCGCCAGCC GCCGTCGTCGCGGGCATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSHHLAQVNIGRILHPIDDPRMSGFVNQLAPINALADASPGFVWRLQSSSGNATDVVYSEDPFVLVNMSVWESLESLRDY TYSPRHIGVFRDRAHWFEKMDKPNYCLWWIPAGHTPTVPEARERLEHYQIHGATPYSFWFSQPFPAPCAEPAVIK
Sequences:
>Translated_155_residues MSHHLAQVNIGRILHPIDDPRMSGFVNQLAPINALADASPGFVWRLQSSSGNATDVVYSEDPFVLVNMSVWESLESLRDY TYSPRHIGVFRDRAHWFEKMDKPNYCLWWIPAGHTPTVPEARERLEHYQIHGATPYSFWFSQPFPAPCAEPAVIK >Mature_154_residues SHHLAQVNIGRILHPIDDPRMSGFVNQLAPINALADASPGFVWRLQSSSGNATDVVYSEDPFVLVNMSVWESLESLRDYT YSPRHIGVFRDRAHWFEKMDKPNYCLWWIPAGHTPTVPEARERLEHYQIHGATPYSFWFSQPFPAPCAEPAVIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17734; Mature: 17603
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHHLAQVNIGRILHPIDDPRMSGFVNQLAPINALADASPGFVWRLQSSSGNATDVVYSE CCCCCEEEECCCEECCCCCHHHHHHHHHHCCCHHHCCCCCCEEEEEECCCCCCEEEEECC DPFVLVNMSVWESLESLRDYTYSPRHIGVFRDRAHWFEKMDKPNYCLWWIPAGHTPTVPE CCEEEEEHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCCEEEEEEECCCCCCCHH ARERLEHYQIHGATPYSFWFSQPFPAPCAEPAVIK HHHHHHHEEECCCCCCEEECCCCCCCCCCCCCCCC >Mature Secondary Structure SHHLAQVNIGRILHPIDDPRMSGFVNQLAPINALADASPGFVWRLQSSSGNATDVVYSE CCCCEEEECCCEECCCCCHHHHHHHHHHCCCHHHCCCCCCEEEEEECCCCCCEEEEECC DPFVLVNMSVWESLESLRDYTYSPRHIGVFRDRAHWFEKMDKPNYCLWWIPAGHTPTVPE CCEEEEEHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCCEEEEEEECCCCCCCHH ARERLEHYQIHGATPYSFWFSQPFPAPCAEPAVIK HHHHHHHEEECCCCCCEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA