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The map label for this gene is nmeDIMP [H]

Identifier: 116620808

GI number: 116620808

Start: 2101203

End: 2102474

Strand: Reverse

Name: nmeDIMP [H]

Synonym: Acid_1689

Alternate gene names: 116620808

Gene position: 2102474-2101203 (Counterclockwise)

Preceding gene: 116620815

Following gene: 116620807

Centisome position: 21.1

GC content: 55.19

Gene sequence:

>1272_bases
ATGAAGGAACGAAGCGGAGTGAAACGCCCGGGCCTTGCCCATGCTCTGTCAAATGGGAGCGACCACGAATCTGGCCGTTT
CACTCCAAGGCTGTTTTCTTTCTTCTCCGGTCTCGGTTTTCTTGATCTGGGATTCGAGAAAGCCGGGTACACCGTCGCAT
TCGTAAATGAATTCCGTGCGTCTTTCCTCAAAGCCTACAAGCACGCCCGGCTGCACCTTAAGATGAATCCCCCGGAGTAC
GGTTACGTCCAAGGGGACATTTCTGATTTTTTGAATGGCGCAGGGGATCGTCTCTCCGGGCAAGTGCGGGACTCGAAGCT
GGCTGGCAATCTCGTAGGATTCGTCGGAGGTCCCCCATGCCCAGATTTTTCCGTGGGCGGCAAGAACCGTGGCCGGGAAG
GGGACAACGGAAAGCTCTCGGCAACATACGTGGAACTGATCTCGAAACAGAAACCCGACTTCTTCCTGTTCGAGAATGTG
AAGGGCCTTTGGCAGACGAAGGCGCACCGGGCGTTCTACGAAGAACTCAAGACGAAGCTCCACAAGGCCCGGTACGTCAC
AACAGAACGTCTCATTAATACGCTGGACTACGCCGCCCCTCAAGACCGGGCAAGGATTTTGCTGGTCGGAGTCCAAGAGG
GCCGTCTCCGGGACCAGAAAATCGCGTTCGACCAGAAGCGGATGGAGTTGGAAGACGGGTTTTTCCCTTGGACGAGGTAC
GCCAGGTATGCCAATGGCAGTGCTTTCGAGTTTCCTTGGCCTGAGACGGCTCCATTCAGGGAGAACTCCGAGCGGAAGTG
TCCTGAAGGGGTTCCGGCAGAGCTAACGGTTGAGCACTGGTTCCAGCAAAATGATGTTCTGAATCACGAGAACAGCACTC
ACTGTTTCAAGCCGAGAGCGGGGCTGGCCCGGTTCCTCAGCGTAGATGAGGGCGACGACTCAAAGAAGTCATACAAACGC
CTTCACCGATGGCGGTACTCACCAACGGTCTGCTACGGCAACAATGAAGTTCATCTCCATCCTTACAAGCCTCGGCGCAT
TTCTGTGGCCGAGGCACTGGCACTCCAGTCTCTGCCAAAAGAATTCGTGCTCCCCCCTGATATGACGCTTTCTGATATGT
TCAAAGGCGTTGGGAATGGCGTTCCATTCGTGGCCGCAAGAGCGGTAGCGATGGCCTTTCTCGACATCTTGAGAGCTGAT
GAGAGTGACAGCAGCAGAACTGACAAGAGCCATCGATGCGCTGCCAAGGAACAGGGCATACCAGTACGTTGA

Upstream 100 bases:

>100_bases
GGCTTGAGGATCAAACGCAATGAAAGCCAGATCGAAGACCCGAACCGACAGAAGCACCGGCAAGAACCAGGATGGGCTAA
AATGTGAAGATTCCCCCGAG

Downstream 100 bases:

>100_bases
TGAAGATAATCATGCCGTCATCAATTTGATCGGCGTAACCTATCCAGAAGGCCCAATTTCGTGCAAGCGTTTCGATCCAG
CAGAGGGCCAAACGGCTGGC

Product: DNA-cytosine methyltransferase

Products: NA

Alternate protein names: M.NmeDIP; Cytosine-specific methyltransferase NmeDIP [H]

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MKERSGVKRPGLAHALSNGSDHESGRFTPRLFSFFSGLGFLDLGFEKAGYTVAFVNEFRASFLKAYKHARLHLKMNPPEY
GYVQGDISDFLNGAGDRLSGQVRDSKLAGNLVGFVGGPPCPDFSVGGKNRGREGDNGKLSATYVELISKQKPDFFLFENV
KGLWQTKAHRAFYEELKTKLHKARYVTTERLINTLDYAAPQDRARILLVGVQEGRLRDQKIAFDQKRMELEDGFFPWTRY
ARYANGSAFEFPWPETAPFRENSERKCPEGVPAELTVEHWFQQNDVLNHENSTHCFKPRAGLARFLSVDEGDDSKKSYKR
LHRWRYSPTVCYGNNEVHLHPYKPRRISVAEALALQSLPKEFVLPPDMTLSDMFKGVGNGVPFVAARAVAMAFLDILRAD
ESDSSRTDKSHRCAAKEQGIPVR

Sequences:

>Translated_423_residues
MKERSGVKRPGLAHALSNGSDHESGRFTPRLFSFFSGLGFLDLGFEKAGYTVAFVNEFRASFLKAYKHARLHLKMNPPEY
GYVQGDISDFLNGAGDRLSGQVRDSKLAGNLVGFVGGPPCPDFSVGGKNRGREGDNGKLSATYVELISKQKPDFFLFENV
KGLWQTKAHRAFYEELKTKLHKARYVTTERLINTLDYAAPQDRARILLVGVQEGRLRDQKIAFDQKRMELEDGFFPWTRY
ARYANGSAFEFPWPETAPFRENSERKCPEGVPAELTVEHWFQQNDVLNHENSTHCFKPRAGLARFLSVDEGDDSKKSYKR
LHRWRYSPTVCYGNNEVHLHPYKPRRISVAEALALQSLPKEFVLPPDMTLSDMFKGVGNGVPFVAARAVAMAFLDILRAD
ESDSSRTDKSHRCAAKEQGIPVR
>Mature_423_residues
MKERSGVKRPGLAHALSNGSDHESGRFTPRLFSFFSGLGFLDLGFEKAGYTVAFVNEFRASFLKAYKHARLHLKMNPPEY
GYVQGDISDFLNGAGDRLSGQVRDSKLAGNLVGFVGGPPCPDFSVGGKNRGREGDNGKLSATYVELISKQKPDFFLFENV
KGLWQTKAHRAFYEELKTKLHKARYVTTERLINTLDYAAPQDRARILLVGVQEGRLRDQKIAFDQKRMELEDGFFPWTRY
ARYANGSAFEFPWPETAPFRENSERKCPEGVPAELTVEHWFQQNDVLNHENSTHCFKPRAGLARFLSVDEGDDSKKSYKR
LHRWRYSPTVCYGNNEVHLHPYKPRRISVAEALALQSLPKEFVLPPDMTLSDMFKGVGNGVPFVAARAVAMAFLDILRAD
ESDSSRTDKSHRCAAKEQGIPVR

Specific function: This methylase recognizes a double-stranded sequence, causes specific methylation on a C on both strands, and protects the DNA from cleavage by the NmeDIP endonuclease [H]

COG id: COG0270

COG function: function code L; Site-specific DNA methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the C5-methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001525 [H]

Pfam domain/function: PF00145 DNA_methylase [H]

EC number: =2.1.1.37 [H]

Molecular weight: Translated: 47808; Mature: 47808

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKERSGVKRPGLAHALSNGSDHESGRFTPRLFSFFSGLGFLDLGFEKAGYTVAFVNEFRA
CCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEECCCCCCCCEEEHHHHHHH
SFLKAYKHARLHLKMNPPEYGYVQGDISDFLNGAGDRLSGQVRDSKLAGNLVGFVGGPPC
HHHHHHHCCEEEEEECCCCCCEEECCHHHHHCCCCCCCCCCHHHHHHHCCEEEECCCCCC
PDFSVGGKNRGREGDNGKLSATYVELISKQKPDFFLFENVKGLWQTKAHRAFYEELKTKL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
HKARYVTTERLINTLDYAAPQDRARILLVGVQEGRLRDQKIAFDQKRMELEDGFFPWTRY
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHH
ARYANGSAFEFPWPETAPFRENSERKCPEGVPAELTVEHWFQQNDVLNHENSTHCFKPRA
HHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCHH
GLARFLSVDEGDDSKKSYKRLHRWRYSPTVCYGNNEVHLHPYKPRRISVAEALALQSLPK
HHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHCCH
EFVLPPDMTLSDMFKGVGNGVPFVAARAVAMAFLDILRADESDSSRTDKSHRCAAKEQGI
HHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC
PVR
CCC
>Mature Secondary Structure
MKERSGVKRPGLAHALSNGSDHESGRFTPRLFSFFSGLGFLDLGFEKAGYTVAFVNEFRA
CCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEECCCCCCCCEEEHHHHHHH
SFLKAYKHARLHLKMNPPEYGYVQGDISDFLNGAGDRLSGQVRDSKLAGNLVGFVGGPPC
HHHHHHHCCEEEEEECCCCCCEEECCHHHHHCCCCCCCCCCHHHHHHHCCEEEECCCCCC
PDFSVGGKNRGREGDNGKLSATYVELISKQKPDFFLFENVKGLWQTKAHRAFYEELKTKL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
HKARYVTTERLINTLDYAAPQDRARILLVGVQEGRLRDQKIAFDQKRMELEDGFFPWTRY
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHH
ARYANGSAFEFPWPETAPFRENSERKCPEGVPAELTVEHWFQQNDVLNHENSTHCFKPRA
HHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCHH
GLARFLSVDEGDDSKKSYKRLHRWRYSPTVCYGNNEVHLHPYKPRRISVAEALALQSLPK
HHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHCCH
EFVLPPDMTLSDMFKGVGNGVPFVAARAVAMAFLDILRADESDSSRTDKSHRCAAKEQGI
HHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC
PVR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10671450 [H]