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The map label for this gene is nmeDIRP [H]

Identifier: 116620807

GI number: 116620807

Start: 2100203

End: 2101099

Strand: Reverse

Name: nmeDIRP [H]

Synonym: Acid_1688

Alternate gene names: 116620807

Gene position: 2101099-2100203 (Counterclockwise)

Preceding gene: 116620808

Following gene: 116620806

Centisome position: 21.08

GC content: 53.29

Gene sequence:

>897_bases
GTGGACGTCAAAACGATCTCCCGGAATGCGCTATGGAGATTGGCGAATGCGCTGATCCCCGGCCACCCGATCAACGTTGA
CCGACTTTTTGCAGGTAGCTACAACATAAGATCGGTGCTCGAAGCCCTTTTGGTTCACACGCCACAGTTCTACTCCTGTA
TGCCGGGGAGAATTGAATTGATCGGCTCTGCAAGCCCAGAGATCAAGCGTGGGCATGAACACATCGTCTGGAGGCCGGAT
CAGCCTCATGAACTAGGAACCCTCGCAAGAATCGAAACCGATGTGGTCATTTCTGAGGTTCCAAACGCTGAAGCAGTGTA
CGACTCCTTGACGATCGTCGAGCCTGATCGGGAGATGAACATTGAGCTCCAACGTCGTCACTCGCAGATTCAGGTAGCCC
TCACTATGATCGGTCAGCAACTAGGCTTTCGGACGTGGATCGCACAAAACGACAGGGGCATCATCTACGGCGGTCAGCCC
ATCAGTGAGATGCCCGGTGTGATCGGTGAGCTTCGGGACGAAAGACTATTCAGCGGATTCGGAGAAGCCGCCGCAGCCGG
AGTTTTCATAGATGTGATCTGGCTTCGCAATCACCGCTTCATGCCAGCCGTCTTGGAAATCGAACACAGCACGGGTGTTA
CATCCGGCCTCAGCCGTATGCTGGCATTTCGTGATCTCTTGCCTCAAATCGCAACCCGTTGGGTGATCGTAGCTCCCGAC
GAAGACAGGGCAAAAGTAATCGAGGAAGCGAACCTCCAACAGTTTCGGGAGATGAAAGGCTTCTATTTCCCCTATTCGGC
AGTGGAAGAGCTCTATTCGTTCTGCGATCGACGAAAACTCAAAGGCGTCAAAGATGATTTCTTGGAATGCTTCATGGAGC
CGTGTGTCACGGCCTGA

Upstream 100 bases:

>100_bases
AGATAATCATGCCGTCATCAATTTGATCGGCGTAACCTATCCAGAAGGCCCAATTTCGTGCAAGCGTTTCGATCCAGCAG
AGGGCCAAACGGCTGGCACC

Downstream 100 bases:

>100_bases
GTGCTGAACCGGGATGGATTCGATCTCTCCCGAGCGTCGCTCGGCAAACATGCGCCGGATTCGGAGCCGGGACACGTCAC
CGGAGATCGCTGTACGACGG

Product: type II site-specific deoxyribonuclease

Products: NA

Alternate protein names: R.NmeDIP; Endonuclease NmeDIP; Type II restriction enzyme NmeDIP [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MDVKTISRNALWRLANALIPGHPINVDRLFAGSYNIRSVLEALLVHTPQFYSCMPGRIELIGSASPEIKRGHEHIVWRPD
QPHELGTLARIETDVVISEVPNAEAVYDSLTIVEPDREMNIELQRRHSQIQVALTMIGQQLGFRTWIAQNDRGIIYGGQP
ISEMPGVIGELRDERLFSGFGEAAAAGVFIDVIWLRNHRFMPAVLEIEHSTGVTSGLSRMLAFRDLLPQIATRWVIVAPD
EDRAKVIEEANLQQFREMKGFYFPYSAVEELYSFCDRRKLKGVKDDFLECFMEPCVTA

Sequences:

>Translated_298_residues
MDVKTISRNALWRLANALIPGHPINVDRLFAGSYNIRSVLEALLVHTPQFYSCMPGRIELIGSASPEIKRGHEHIVWRPD
QPHELGTLARIETDVVISEVPNAEAVYDSLTIVEPDREMNIELQRRHSQIQVALTMIGQQLGFRTWIAQNDRGIIYGGQP
ISEMPGVIGELRDERLFSGFGEAAAAGVFIDVIWLRNHRFMPAVLEIEHSTGVTSGLSRMLAFRDLLPQIATRWVIVAPD
EDRAKVIEEANLQQFREMKGFYFPYSAVEELYSFCDRRKLKGVKDDFLECFMEPCVTA
>Mature_298_residues
MDVKTISRNALWRLANALIPGHPINVDRLFAGSYNIRSVLEALLVHTPQFYSCMPGRIELIGSASPEIKRGHEHIVWRPD
QPHELGTLARIETDVVISEVPNAEAVYDSLTIVEPDREMNIELQRRHSQIQVALTMIGQQLGFRTWIAQNDRGIIYGGQP
ISEMPGVIGELRDERLFSGFGEAAAAGVFIDVIWLRNHRFMPAVLEIEHSTGVTSGLSRMLAFRDLLPQIATRWVIVAPD
EDRAKVIEEANLQQFREMKGFYFPYSAVEELYSFCDRRKLKGVKDDFLECFMEPCVTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: =3.1.21.4 [H]

Molecular weight: Translated: 33794; Mature: 33794

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVKTISRNALWRLANALIPGHPINVDRLFAGSYNIRSVLEALLVHTPQFYSCMPGRIEL
CCCCHHHHHHHHHHHHHHCCCCCCCHHEEEECCCCHHHHHHHHHHCCCHHHHCCCCCEEE
IGSASPEIKRGHEHIVWRPDQPHELGTLARIETDVVISEVPNAEAVYDSLTIVEPDREMN
EECCCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHEECCCCHHHHHCCEEEECCCCCCC
IELQRRHSQIQVALTMIGQQLGFRTWIAQNDRGIIYGGQPISEMPGVIGELRDERLFSGF
HHHHHHHHHHHHHHHHHHHHHCHHHHEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHCC
GEAAAAGVFIDVIWLRNHRFMPAVLEIEHSTGVTSGLSRMLAFRDLLPQIATRWVIVAPD
CHHHHHHHHEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCEEEECCC
EDRAKVIEEANLQQFREMKGFYFPYSAVEELYSFCDRRKLKGVKDDFLECFMEPCVTA
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDVKTISRNALWRLANALIPGHPINVDRLFAGSYNIRSVLEALLVHTPQFYSCMPGRIEL
CCCCHHHHHHHHHHHHHHCCCCCCCHHEEEECCCCHHHHHHHHHHCCCHHHHCCCCCEEE
IGSASPEIKRGHEHIVWRPDQPHELGTLARIETDVVISEVPNAEAVYDSLTIVEPDREMN
EECCCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHEECCCCHHHHHCCEEEECCCCCCC
IELQRRHSQIQVALTMIGQQLGFRTWIAQNDRGIIYGGQPISEMPGVIGELRDERLFSGF
HHHHHHHHHHHHHHHHHHHHHCHHHHEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHCC
GEAAAAGVFIDVIWLRNHRFMPAVLEIEHSTGVTSGLSRMLAFRDLLPQIATRWVIVAPD
CHHHHHHHHEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCEEEECCC
EDRAKVIEEANLQQFREMKGFYFPYSAVEELYSFCDRRKLKGVKDDFLECFMEPCVTA
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10671450 [H]