| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620734
Identifier: 116620734
GI number: 116620734
Start: 1989894
End: 1990856
Strand: Direct
Name: 116620734
Synonym: Acid_1615
Alternate gene names: NA
Gene position: 1989894-1990856 (Clockwise)
Preceding gene: 116620732
Following gene: 116620735
Centisome position: 19.97
GC content: 54.62
Gene sequence:
>963_bases ATGTCCAAGACGTACGAACTTTATAGAAGCTCTAAGGGAGGTGCCACCGGATCATGGGATAAGCGCGCGAGCTGGACGGA TTATACAGCCACTCTGTCCGTGGATCGCACATCCGCGGATAATGTTTACAGAGGGGGTGGCTTCTGGACATCGAGTGACG GCGGACAACTGTTTAATTCACTTGCTGGTCCTCACGCGGATCTACACGAGTTTGCAACTGATCCGACTAATCCTGGATTA CTGTACACGGTGTGTGATGGCGGAATCTACAGGTCGCTCGATTTCGGCACACATTGGGCCTTTTTCGGGGAAGGTCTCGC CAATGTGCAGTTCTACGACCACTCCGTATCGGTTACGGATTCCAATATCGCGATCGGCGGCACACAGGATAATGGAACAA TAAGATACGACGGCTCCAGTACAGTTTGGAGCTATATTGGGGGAGGCGATGGCGGAACGGTTGATATCGACCCATCCAAC TCCTCGCGGCTTTATGCGCAGATCGTCGATCCCGGCGGCGATCCAGGAACTCAATATATCGCGAGCATGAGCACGTCGGC GAATGGCGGGGCAAGCTTTACCAACATTGGCCTAGGTCTACCGGCCGCGCCAACTTGCCAAAACGGTTACTTTCAGGTCG TCCCGACGTTTTTGTCGAGAATACTAGCCTCCTGTCAAGACCTCTGGACGCGCACCTTGGTTGGAGGACCGCTGACCGAA CCTTGGCACCGAATTCTTTGCACAAGTGCGAACGCCTTCGCTTGCCCCGTGGGGAGCCCGATTGTGGGCGGTGATGTAAC ACGGACAGCCGTAGATGCGAGCGTGAATCTTTACTACGCAGGCACCAGTACCGGCGAGCTTTGGGCCGGACCAAATGGCG CTGACTGGAAACGCGTCGCTACTGGCATAGGAGGTGTAAGAGATACCGTGTCGACCCCAACGATTCGACTAATATCTATG TAG
Upstream 100 bases:
>100_bases GACATTGCTGACGGACCCGCAACTGTCCTTTACCGACTTCGATACGGTATTTCTTACTCTCTCTCCACCCACCACCATCT AGGCGGTCTTTCATAGAACT
Downstream 100 bases:
>100_bases CTTCGGATTGGGGCGGAAAGGTCGTCCGTCTAAACCGCTCTTCACCCGCGCCGTCCACCATGACGGTGACTGATATCACC TCGGATCTACCCACATCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSKTYELYRSSKGGATGSWDKRASWTDYTATLSVDRTSADNVYRGGGFWTSSDGGQLFNSLAGPHADLHEFATDPTNPGL LYTVCDGGIYRSLDFGTHWAFFGEGLANVQFYDHSVSVTDSNIAIGGTQDNGTIRYDGSSTVWSYIGGGDGGTVDIDPSN SSRLYAQIVDPGGDPGTQYIASMSTSANGGASFTNIGLGLPAAPTCQNGYFQVVPTFLSRILASCQDLWTRTLVGGPLTE PWHRILCTSANAFACPVGSPIVGGDVTRTAVDASVNLYYAGTSTGELWAGPNGADWKRVATGIGGVRDTVSTPTIRLISM
Sequences:
>Translated_320_residues MSKTYELYRSSKGGATGSWDKRASWTDYTATLSVDRTSADNVYRGGGFWTSSDGGQLFNSLAGPHADLHEFATDPTNPGL LYTVCDGGIYRSLDFGTHWAFFGEGLANVQFYDHSVSVTDSNIAIGGTQDNGTIRYDGSSTVWSYIGGGDGGTVDIDPSN SSRLYAQIVDPGGDPGTQYIASMSTSANGGASFTNIGLGLPAAPTCQNGYFQVVPTFLSRILASCQDLWTRTLVGGPLTE PWHRILCTSANAFACPVGSPIVGGDVTRTAVDASVNLYYAGTSTGELWAGPNGADWKRVATGIGGVRDTVSTPTIRLISM >Mature_319_residues SKTYELYRSSKGGATGSWDKRASWTDYTATLSVDRTSADNVYRGGGFWTSSDGGQLFNSLAGPHADLHEFATDPTNPGLL YTVCDGGIYRSLDFGTHWAFFGEGLANVQFYDHSVSVTDSNIAIGGTQDNGTIRYDGSSTVWSYIGGGDGGTVDIDPSNS SRLYAQIVDPGGDPGTQYIASMSTSANGGASFTNIGLGLPAAPTCQNGYFQVVPTFLSRILASCQDLWTRTLVGGPLTEP WHRILCTSANAFACPVGSPIVGGDVTRTAVDASVNLYYAGTSTGELWAGPNGADWKRVATGIGGVRDTVSTPTIRLISM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33687; Mature: 33556
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTYELYRSSKGGATGSWDKRASWTDYTATLSVDRTSADNVYRGGGFWTSSDGGQLFNS CCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEECCCEEECCCCHHHHHH LAGPHADLHEFATDPTNPGLLYTVCDGGIYRSLDFGTHWAFFGEGLANVQFYDHSVSVTD HCCCCCHHHHHCCCCCCCCEEEEEECCCEEEEECCCCCHHHHCCCCCEEEEECCEEEEEC SNIAIGGTQDNGTIRYDGSSTVWSYIGGGDGGTVDIDPSNSSRLYAQIVDPGGDPGTQYI CCEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEECCCCCCEEEEEEECCCCCCHHHHH ASMSTSANGGASFTNIGLGLPAAPTCQNGYFQVVPTFLSRILASCQDLWTRTLVGGPLTE EECCCCCCCCCCEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCC PWHRILCTSANAFACPVGSPIVGGDVTRTAVDASVNLYYAGTSTGELWAGPNGADWKRVA HHHHHEEECCCEEECCCCCCCCCCCCEEEEEECEEEEEEECCCCCCEECCCCCCCHHHHH TGIGGVRDTVSTPTIRLISM HHCCCCHHCCCCCEEEEEEC >Mature Secondary Structure SKTYELYRSSKGGATGSWDKRASWTDYTATLSVDRTSADNVYRGGGFWTSSDGGQLFNS CCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEECCCEEECCCCHHHHHH LAGPHADLHEFATDPTNPGLLYTVCDGGIYRSLDFGTHWAFFGEGLANVQFYDHSVSVTD HCCCCCHHHHHCCCCCCCCEEEEEECCCEEEEECCCCCHHHHCCCCCEEEEECCEEEEEC SNIAIGGTQDNGTIRYDGSSTVWSYIGGGDGGTVDIDPSNSSRLYAQIVDPGGDPGTQYI CCEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEECCCCCCEEEEEEECCCCCCHHHHH ASMSTSANGGASFTNIGLGLPAAPTCQNGYFQVVPTFLSRILASCQDLWTRTLVGGPLTE EECCCCCCCCCCEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCC PWHRILCTSANAFACPVGSPIVGGDVTRTAVDASVNLYYAGTSTGELWAGPNGADWKRVA HHHHHEEECCCEEECCCCCCCCCCCCEEEEEECEEEEEEECCCCCCEECCCCCCCHHHHH TGIGGVRDTVSTPTIRLISM HHCCCCHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA