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The map label for this gene is 116620732

Identifier: 116620732

GI number: 116620732

Start: 1987973

End: 1988263

Strand: Direct

Name: 116620732

Synonym: Acid_1613

Alternate gene names: NA

Gene position: 1987973-1988263 (Clockwise)

Preceding gene: 116620731

Following gene: 116620734

Centisome position: 19.95

GC content: 66.32

Gene sequence:

>291_bases
ATGCCGTTTCCAGCCGCTCGTCTAACCGACTTTCACGTGTGTCCGCTGTTCAACGGACCTCAACCGCACGTGGGCGGCCC
GGTCGCCGCCGGATGTCCCACGGTCTTGATCGGAGGATTGCCCGTGGCCCGGGCCACCGATGTTTGCACCTGCGCCGGCC
CGCCCGACATGATCGCCAAAGGCTCCGCAACCGTCTTCATCGGCGGGCTGCCCGCCGCCAGGCAACTCGACCAAACTGCT
CACGGGGGCGTGGTCGTCACCGGCTATCCAACGGTGCTGATCGGAGGATGA

Upstream 100 bases:

>100_bases
TGTCCCGAGATCTGTGCGTTGACGCTGGCCAGCGTAGCCTTGCCCGCTTCGGACCGAGCCATTCTCAACGTTGCCATTAC
GAACGTGAGGTGACCCAGAC

Downstream 100 bases:

>100_bases
GGCAGGTTTGCCCGAGAAGCTTCATCGTAGTAATCTCCTCCACCCATGAGCAGAACCCGAATATTCGCTGGCAGCCCATC
AATTGCCTGCTGAGGCACTC

Product: PAAR repeat-containing protein

Products: NA

Alternate protein names: Type VI Secretion System Protein EvpJ; Type VI Secretion PAAR Domain Protein; PAAR Motif Family; Paar Repeat-Containing Protein; PAAR Domain-Containing Protein Containing Protein; Superfamily II DNA Helicase

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MPFPAARLTDFHVCPLFNGPQPHVGGPVAAGCPTVLIGGLPVARATDVCTCAGPPDMIAKGSATVFIGGLPAARQLDQTA
HGGVVVTGYPTVLIGG

Sequences:

>Translated_96_residues
MPFPAARLTDFHVCPLFNGPQPHVGGPVAAGCPTVLIGGLPVARATDVCTCAGPPDMIAKGSATVFIGGLPAARQLDQTA
HGGVVVTGYPTVLIGG
>Mature_95_residues
PFPAARLTDFHVCPLFNGPQPHVGGPVAAGCPTVLIGGLPVARATDVCTCAGPPDMIAKGSATVFIGGLPAARQLDQTAH
GGVVVTGYPTVLIGG

Specific function: Unknown

COG id: COG4104

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9517; Mature: 9386

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFPAARLTDFHVCPLFNGPQPHVGGPVAAGCPTVLIGGLPVARATDVCTCAGPPDMIAK
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCEEC
GSATVFIGGLPAARQLDQTAHGGVVVTGYPTVLIGG
CCCEEEEECCCCHHHHCCCCCCCEEEECCCEEEECC
>Mature Secondary Structure 
PFPAARLTDFHVCPLFNGPQPHVGGPVAAGCPTVLIGGLPVARATDVCTCAGPPDMIAK
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCEEC
GSATVFIGGLPAARQLDQTAHGGVVVTGYPTVLIGG
CCCEEEEECCCCHHHHCCCCCCCEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA