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The map label for this gene is 116620712

Identifier: 116620712

GI number: 116620712

Start: 1956174

End: 1957226

Strand: Reverse

Name: 116620712

Synonym: Acid_1592

Alternate gene names: NA

Gene position: 1957226-1956174 (Counterclockwise)

Preceding gene: 116620713

Following gene: 116620710

Centisome position: 19.64

GC content: 61.63

Gene sequence:

>1053_bases
ATGGAAACATGGCGGCGGCTTTTTTTTTGCGGAGATCGCGGATCGCCGCGGAACCCGCGTAGGAGCCGAACGATGCGACA
ACGTTCATTGGCGGCTGCAATAGCCGTACTCACTTGCGGAACTGGGTTCCCCCAGAACGACGACTGGCGATCGCGGATGC
ACGAGGGCGCTGCCGCGGAAACCCTTGGCGACTACGTCAGCGCGACCTCCTCTTACCGCGCCGCAACCGAAATCGCCGAG
CACTTCGACCGCGGCGATCGGCGTAGAGGGATCTCCTGGAATTCTCTGTCCTTAATGTACGATGCGTTGGGACGATGCGC
TGAGGCCCAAGCCGGGTATCGCCGTGCGATCAAGGAGATTGCGGAGTCTAGCGGGAAAGCCGGGCCGGACTATGCCCTCG
TGCTTGCAAACCTTGGAGCTTCGTACGTGGAAACCGGTCAGACCGGTGCCGGGGAAAAGCTGTTGCGCGACGCCGTGGCG
ATTTACTCCGCGGCCGATCCGCCGGATAAGTTGCGCATTGCCGTTGCGCAGAATGGCCTGGCCGAGGCTCTCTGCATTAT
CCATAAATACAAAGAGGCCGATCCGCTGTTGACCGGTGCCCTGGCTGTGTTGGAAAAGAACCCCAGCTCTTGGGGCGAGA
CTGCGCTCGCAAAGAACAATCTGGGTATTGTGCGCCTCTTTGAAGGGGACCACCGGGAGGCCCGGCGCTTGCTTCCGCAG
GCGCTGGAGATGCTGGAACAGCGTTTGGGGCCGGATCATCCGATGCTGGTGCGAGTCCTAAACAATCTGGCATCGCTCGA
GCACAGCACCGGTCATCGCGAGGAGGCCATCCAGAGACTCCGCCGGGCGCTCGACATCGCGGAAAAGCGCCTGGGACCGG
AACACCCGTCCTATGGCCTCCTGCTCGCCAATTACGCGGCCTTGCTGCGGGAAGGAGGTGACAAGTCCCGGGCCAAAGTG
CTGGAGGCGCAGTCCAGCCAGATTCTGAAGGATAGTAGCCGGCGCAATGGCCTGGGGGCGGTGGTCGACATTAACTCGCT
TCGACGCAAGTAG

Upstream 100 bases:

>100_bases
AAGCAATACGGATTGAGGGATTCACGCTTGGCTGGAAGGAACGCCGCCGGGCGGTAGGCATAGATCAACCGGTTGACCGA
AGCTCTCGGAGGCCGTCGCT

Downstream 100 bases:

>100_bases
CCACACAAAAAAGGCGGCCCGCTGCCGGGCCGCCTTGTCACAGGAGTAACCGATCCTTCGTCCTACCAGAAGAACTTCAT
GCGGACCTGGATCTGGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family; Tetratricopeptide Repeat Family Protein; Kinesin Light Chain; NB-ARC Domain-Containing Protein; NB-ARC Domain Protein; Tetratricopeptide Domain-Containing Protein; Nb-Arc; TPR Domain Family Protein; SEC-C Motif Domain Protein; Tetratricopeptide Repeat-Containing Protein; Serine/Threonine Protein Kinase; Ankyrin And Tpr Repeat Domain Protein; Peptidase-Like; TPR Domain-Containing Protein

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
METWRRLFFCGDRGSPRNPRRSRTMRQRSLAAAIAVLTCGTGFPQNDDWRSRMHEGAAAETLGDYVSATSSYRAATEIAE
HFDRGDRRRGISWNSLSLMYDALGRCAEAQAGYRRAIKEIAESSGKAGPDYALVLANLGASYVETGQTGAGEKLLRDAVA
IYSAADPPDKLRIAVAQNGLAEALCIIHKYKEADPLLTGALAVLEKNPSSWGETALAKNNLGIVRLFEGDHREARRLLPQ
ALEMLEQRLGPDHPMLVRVLNNLASLEHSTGHREEAIQRLRRALDIAEKRLGPEHPSYGLLLANYAALLREGGDKSRAKV
LEAQSSQILKDSSRRNGLGAVVDINSLRRK

Sequences:

>Translated_350_residues
METWRRLFFCGDRGSPRNPRRSRTMRQRSLAAAIAVLTCGTGFPQNDDWRSRMHEGAAAETLGDYVSATSSYRAATEIAE
HFDRGDRRRGISWNSLSLMYDALGRCAEAQAGYRRAIKEIAESSGKAGPDYALVLANLGASYVETGQTGAGEKLLRDAVA
IYSAADPPDKLRIAVAQNGLAEALCIIHKYKEADPLLTGALAVLEKNPSSWGETALAKNNLGIVRLFEGDHREARRLLPQ
ALEMLEQRLGPDHPMLVRVLNNLASLEHSTGHREEAIQRLRRALDIAEKRLGPEHPSYGLLLANYAALLREGGDKSRAKV
LEAQSSQILKDSSRRNGLGAVVDINSLRRK
>Mature_350_residues
METWRRLFFCGDRGSPRNPRRSRTMRQRSLAAAIAVLTCGTGFPQNDDWRSRMHEGAAAETLGDYVSATSSYRAATEIAE
HFDRGDRRRGISWNSLSLMYDALGRCAEAQAGYRRAIKEIAESSGKAGPDYALVLANLGASYVETGQTGAGEKLLRDAVA
IYSAADPPDKLRIAVAQNGLAEALCIIHKYKEADPLLTGALAVLEKNPSSWGETALAKNNLGIVRLFEGDHREARRLLPQ
ALEMLEQRLGPDHPMLVRVLNNLASLEHSTGHREEAIQRLRRALDIAEKRLGPEHPSYGLLLANYAALLREGGDKSRAKV
LEAQSSQILKDSSRRNGLGAVVDINSLRRK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI41871960, Length=186, Percent_Identity=32.258064516129, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI41871955, Length=186, Percent_Identity=32.258064516129, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI41871946, Length=186, Percent_Identity=32.258064516129, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI110735431, Length=213, Percent_Identity=32.3943661971831, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI194306559, Length=213, Percent_Identity=32.3943661971831, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI33620730, Length=213, Percent_Identity=32.3943661971831, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI34304360, Length=274, Percent_Identity=27.007299270073, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI198041728, Length=189, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI198041734, Length=189, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI198041731, Length=189, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI12383062, Length=189, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI91825557, Length=126, Percent_Identity=38.8888888888889, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71984535, Length=184, Percent_Identity=34.2391304347826, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71984527, Length=184, Percent_Identity=34.2391304347826, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71984517, Length=187, Percent_Identity=34.2245989304813, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI71984524, Length=184, Percent_Identity=34.2391304347826, Blast_Score=78, Evalue=6e-15,
Organism=Drosophila melanogaster, GI17647555, Length=210, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38480; Mature: 38480

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METWRRLFFCGDRGSPRNPRRSRTMRQRSLAAAIAVLTCGTGFPQNDDWRSRMHEGAAAE
CCCHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHH
TLGDYVSATSSYRAATEIAEHFDRGDRRRGISWNSLSLMYDALGRCAEAQAGYRRAIKEI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AESSGKAGPDYALVLANLGASYVETGQTGAGEKLLRDAVAIYSAADPPDKLRIAVAQNGL
HHHCCCCCCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHEEEHHHHCCH
AEALCIIHKYKEADPLLTGALAVLEKNPSSWGETALAKNNLGIVRLFEGDHREARRLLPQ
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
ALEMLEQRLGPDHPMLVRVLNNLASLEHSTGHREEAIQRLRRALDIAEKRLGPEHPSYGL
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH
LLANYAALLREGGDKSRAKVLEAQSSQILKDSSRRNGLGAVVDINSLRRK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCC
>Mature Secondary Structure
METWRRLFFCGDRGSPRNPRRSRTMRQRSLAAAIAVLTCGTGFPQNDDWRSRMHEGAAAE
CCCHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHH
TLGDYVSATSSYRAATEIAEHFDRGDRRRGISWNSLSLMYDALGRCAEAQAGYRRAIKEI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AESSGKAGPDYALVLANLGASYVETGQTGAGEKLLRDAVAIYSAADPPDKLRIAVAQNGL
HHHCCCCCCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHEEEHHHHCCH
AEALCIIHKYKEADPLLTGALAVLEKNPSSWGETALAKNNLGIVRLFEGDHREARRLLPQ
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
ALEMLEQRLGPDHPMLVRVLNNLASLEHSTGHREEAIQRLRRALDIAEKRLGPEHPSYGL
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH
LLANYAALLREGGDKSRAKVLEAQSSQILKDSSRRNGLGAVVDINSLRRK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA