| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116620646
Identifier: 116620646
GI number: 116620646
Start: 1870361
End: 1872013
Strand: Direct
Name: 116620646
Synonym: Acid_1525
Alternate gene names: NA
Gene position: 1870361-1872013 (Clockwise)
Preceding gene: 116620645
Following gene: 116620647
Centisome position: 18.77
GC content: 63.76
Gene sequence:
>1653_bases ATGCGAAGAAGAAGTAGCGCGGCGCTCTTTCTCACCCTGGCGATGGCCGCCGCGGCGTTCACCCAGACCCAGCCGCCGCG CGCCGACGAAAAACCGGCGTCGGTCGAAGGCGAGGTGCGCAACATGATCACCGGCTTGCCGGTTGAGCGCGCGCACGTTT CCTTGCGCCGCTATGTCAACGGCGGGTGGGACCGTTACGGCGCGCAGACCAATGCCGAGGGCAAGTTCAGCATCCTGGGA ATCCCGGCGGGAAATTATCAGGTCGCCCTGGACAGGGTGGGATACGTCGTTCCGGCGGAAGTCACGCGCGGACAGATGAC GCTCCGGTCCGATGAGAAGAAGAGTAACTACAAAGTCAAATTGATCCCGGTGGGGTCGATCTCCGGGCGCGTATTGGATG CCGATGGCGCACCCCTCGAAGGGCTCTCAGTGGAAGCGGAATTCGGCGGCAGGCCGGACCGCAGCGCGATGACCGACGAT CGCGGCCAATATCGGATCGGCGGATTGCATCCCGGAAAGTACCGGGTCCGTGCCAAGGTGCAGGCCCTCCCGATTCCGCC CGAGATCCGCACGGATGGGAGCGCGGAAGTGAACTATGCGGCCACCTACCATCCCGGCGCGCTGGACGCGAAATCGGCGG CCGCCATCACGGTGGGAGCGGCGACCGAGGTGACCGGCATCGATATCCGCATGGTGCGAATCCCGATTGTCAGGCTGGGC GGCAAGGTGTCCGGTATTCCCGCCGGCGTGAAACCCGTGGTCGTGCAGATCCAACAGAACGGTACCTATGGTGTGAGCGG CGCCCAGATGAAACCGGACGGCAGTTTCGAGGTATGGCGGCTCAGTCCGGGGAAGTACACGGCCACCGCGATGGCAAATA ACGCCGGCGACTTCCTGCGCTCGGTGCCGGTGGATTTCGAGATCGGCGAAAGCGACGTGGAGAATATCGAGCTGCGTGTG CTGCCGCCCGAAGACATCAAAGGCCAACTCGAGTTCGACGACGAAATGGCCAAGCCCAGGCCGCCGCAGCAGCAGTCCGG GCAGCAATCGACTCCGCAGGCCGCGCCCGGGGCTGCGACTTGGCAGCAGCCGCAGGCGCCGCGTCCGATGCACCGCATCA CGCTGCGCGAGCCCAATAACATGGCGCAGATGAAAATGGCGGATATCGCTGACGATGGCTCGTTCACCTTCGAGAAGGTA GCGCCCGGGAAGTATCAGGTGAACCTGATGGGCTACCCCGCGTTCGTCAAATCGGTGCGAATCGGGCAGACCGGAGAAGA CGGCCCCACGCTCGACGTACGGTCCGGCGTCAACGGCGCGGAGTTGACCGTCACAGTGAGCTCGGCCTGGGCAGGCGTCA GCGGGGTAGTCAACGATGACAAAGGGCCGTACGCAGGCGCGCGTGTGGTGGTCCGCGATACCGACAAGCGTAACTTCACC AACGGCACGATGACCGCGGCCGACGGAACCTACAGCATTAAGAACGTGCCGCCGGGGAAATACAAGCTGCTGGTGCTGGA TGAAGGCGAAACCAACCTGATGACCAGCGAAACGAATCTGGACGATTTCGACGACCGAGCGGAGACCATCGAACTGCGTC CCAAGGAGACCCTGACCCGCGACCTCAGACTGCGTCCCGCGCCCGGCAAGTAA
Upstream 100 bases:
>100_bases ATGCTGCAGGACATGTTCAATCGCGCCGAGGAAGTGGAATTCAAGGAAGGCGAAAAAGTAACCAGGGACCTGCGGGTGAT GGCGACGAAGGAGGATCCGA
Downstream 100 bases:
>100_bases GCTTGCGGACCTTGCGCGGCGAGTGATAGCCTCGAAGGAACCCGGAGGGGTTAAATTATGAGAGCGCTAGCTTTTCGCAG TCTTGTCTTCGGCGCCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 550; Mature: 550
Protein sequence:
>550_residues MRRRSSAALFLTLAMAAAAFTQTQPPRADEKPASVEGEVRNMITGLPVERAHVSLRRYVNGGWDRYGAQTNAEGKFSILG IPAGNYQVALDRVGYVVPAEVTRGQMTLRSDEKKSNYKVKLIPVGSISGRVLDADGAPLEGLSVEAEFGGRPDRSAMTDD RGQYRIGGLHPGKYRVRAKVQALPIPPEIRTDGSAEVNYAATYHPGALDAKSAAAITVGAATEVTGIDIRMVRIPIVRLG GKVSGIPAGVKPVVVQIQQNGTYGVSGAQMKPDGSFEVWRLSPGKYTATAMANNAGDFLRSVPVDFEIGESDVENIELRV LPPEDIKGQLEFDDEMAKPRPPQQQSGQQSTPQAAPGAATWQQPQAPRPMHRITLREPNNMAQMKMADIADDGSFTFEKV APGKYQVNLMGYPAFVKSVRIGQTGEDGPTLDVRSGVNGAELTVTVSSAWAGVSGVVNDDKGPYAGARVVVRDTDKRNFT NGTMTAADGTYSIKNVPPGKYKLLVLDEGETNLMTSETNLDDFDDRAETIELRPKETLTRDLRLRPAPGK
Sequences:
>Translated_550_residues MRRRSSAALFLTLAMAAAAFTQTQPPRADEKPASVEGEVRNMITGLPVERAHVSLRRYVNGGWDRYGAQTNAEGKFSILG IPAGNYQVALDRVGYVVPAEVTRGQMTLRSDEKKSNYKVKLIPVGSISGRVLDADGAPLEGLSVEAEFGGRPDRSAMTDD RGQYRIGGLHPGKYRVRAKVQALPIPPEIRTDGSAEVNYAATYHPGALDAKSAAAITVGAATEVTGIDIRMVRIPIVRLG GKVSGIPAGVKPVVVQIQQNGTYGVSGAQMKPDGSFEVWRLSPGKYTATAMANNAGDFLRSVPVDFEIGESDVENIELRV LPPEDIKGQLEFDDEMAKPRPPQQQSGQQSTPQAAPGAATWQQPQAPRPMHRITLREPNNMAQMKMADIADDGSFTFEKV APGKYQVNLMGYPAFVKSVRIGQTGEDGPTLDVRSGVNGAELTVTVSSAWAGVSGVVNDDKGPYAGARVVVRDTDKRNFT NGTMTAADGTYSIKNVPPGKYKLLVLDEGETNLMTSETNLDDFDDRAETIELRPKETLTRDLRLRPAPGK >Mature_550_residues MRRRSSAALFLTLAMAAAAFTQTQPPRADEKPASVEGEVRNMITGLPVERAHVSLRRYVNGGWDRYGAQTNAEGKFSILG IPAGNYQVALDRVGYVVPAEVTRGQMTLRSDEKKSNYKVKLIPVGSISGRVLDADGAPLEGLSVEAEFGGRPDRSAMTDD RGQYRIGGLHPGKYRVRAKVQALPIPPEIRTDGSAEVNYAATYHPGALDAKSAAAITVGAATEVTGIDIRMVRIPIVRLG GKVSGIPAGVKPVVVQIQQNGTYGVSGAQMKPDGSFEVWRLSPGKYTATAMANNAGDFLRSVPVDFEIGESDVENIELRV LPPEDIKGQLEFDDEMAKPRPPQQQSGQQSTPQAAPGAATWQQPQAPRPMHRITLREPNNMAQMKMADIADDGSFTFEKV APGKYQVNLMGYPAFVKSVRIGQTGEDGPTLDVRSGVNGAELTVTVSSAWAGVSGVVNDDKGPYAGARVVVRDTDKRNFT NGTMTAADGTYSIKNVPPGKYKLLVLDEGETNLMTSETNLDDFDDRAETIELRPKETLTRDLRLRPAPGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59250; Mature: 59250
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRSSAALFLTLAMAAAAFTQTQPPRADEKPASVEGEVRNMITGLPVERAHVSLRRYVN CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHC GGWDRYGAQTNAEGKFSILGIPAGNYQVALDRVGYVVPAEVTRGQMTLRSDEKKSNYKVK CCHHHCCCCCCCCCEEEEEEECCCCEEEEEECCCEEEECCCCCCEEEEECCCCCCCEEEE LIPVGSISGRVLDADGAPLEGLSVEAEFGGRPDRSAMTDDRGQYRIGGLHPGKYRVRAKV EEEECCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEE QALPIPPEIRTDGSAEVNYAATYHPGALDAKSAAAITVGAATEVTGIDIRMVRIPIVRLG EEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCEEECCEEEEEEEEEEEEC GKVSGIPAGVKPVVVQIQQNGTYGVSGAQMKPDGSFEVWRLSPGKYTATAMANNAGDFLR CEECCCCCCCCEEEEEEECCCCCCCCCCEECCCCCEEEEEECCCCEEEEEECCCHHHHHH SVPVDFEIGESDVENIELRVLPPEDIKGQLEFDDEMAKPRPPQQQSGQQSTPQAAPGAAT HCCCCEECCCCCCCCEEEEEECCCCCCCEEEECHHHCCCCCCHHHCCCCCCCCCCCCCCC WQQPQAPRPMHRITLREPNNMAQMKMADIADDGSFTFEKVAPGKYQVNLMGYPAFVKSVR CCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCEEEEEEECCHHHHHEEE IGQTGEDGPTLDVRSGVNGAELTVTVSSAWAGVSGVVNDDKGPYAGARVVVRDTDKRNFT CCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCEECCCCCCCCCEEEEEECCCCCCC NGTMTAADGTYSIKNVPPGKYKLLVLDEGETNLMTSETNLDDFDDRAETIELRPKETLTR CCEEEECCCEEEECCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCEEEEECCHHHHHH DLRLRPAPGK CCEECCCCCC >Mature Secondary Structure MRRRSSAALFLTLAMAAAAFTQTQPPRADEKPASVEGEVRNMITGLPVERAHVSLRRYVN CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHC GGWDRYGAQTNAEGKFSILGIPAGNYQVALDRVGYVVPAEVTRGQMTLRSDEKKSNYKVK CCHHHCCCCCCCCCEEEEEEECCCCEEEEEECCCEEEECCCCCCEEEEECCCCCCCEEEE LIPVGSISGRVLDADGAPLEGLSVEAEFGGRPDRSAMTDDRGQYRIGGLHPGKYRVRAKV EEEECCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEE QALPIPPEIRTDGSAEVNYAATYHPGALDAKSAAAITVGAATEVTGIDIRMVRIPIVRLG EEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCEEECCEEEEEEEEEEEEC GKVSGIPAGVKPVVVQIQQNGTYGVSGAQMKPDGSFEVWRLSPGKYTATAMANNAGDFLR CEECCCCCCCCEEEEEEECCCCCCCCCCEECCCCCEEEEEECCCCEEEEEECCCHHHHHH SVPVDFEIGESDVENIELRVLPPEDIKGQLEFDDEMAKPRPPQQQSGQQSTPQAAPGAAT HCCCCEECCCCCCCCEEEEEECCCCCCCEEEECHHHCCCCCCHHHCCCCCCCCCCCCCCC WQQPQAPRPMHRITLREPNNMAQMKMADIADDGSFTFEKVAPGKYQVNLMGYPAFVKSVR CCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCEEEEEEECCHHHHHEEE IGQTGEDGPTLDVRSGVNGAELTVTVSSAWAGVSGVVNDDKGPYAGARVVVRDTDKRNFT CCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCEECCCCCCCCCEEEEEECCCCCCC NGTMTAADGTYSIKNVPPGKYKLLVLDEGETNLMTSETNLDDFDDRAETIELRPKETLTR CCEEEECCCEEEECCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCEEEEECCHHHHHH DLRLRPAPGK CCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA