| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620645
Identifier: 116620645
GI number: 116620645
Start: 1868728
End: 1870377
Strand: Direct
Name: 116620645
Synonym: Acid_1524
Alternate gene names: NA
Gene position: 1868728-1870377 (Clockwise)
Preceding gene: 116620643
Following gene: 116620646
Centisome position: 18.75
GC content: 61.82
Gene sequence:
>1650_bases ATGAAAAGCGCGGTCTTACTCCTGCTTGCCGGGGCATGTCTATGCGCGCAGCAGCAGGGCAGCGTAGAAGGCATAGCGAC CGATGCTGTTACGCATGAGCCGCTGAGTAATGTTCATGTGCGCCTGATCGCCGCCAGCTTCGCGGGAATCAACGGGGCGT ACGGGGCGATGAGTGACCGCACCGGTCATTTTTCGATTGCCTCCATCCGGCCCGGCACGTACATTCTTCTTCCCGAGCGC CCGGGATATCTCCTCGTACAAACAAAAGGCGAGGCGGGCATTCCGAGCATAACGATCAAGCCGGGCGAGCAGGTTGCGGG ATACCAGTTGGAGATGACTCCCCGCGCGGTTCTGGCGGGGCGGGTGGTAGATGAAGCCGGCGACCCGGTGCAGGGCGTGA AGGTGCAGGCGCAACCGGCGGCGCCGGAAGGTTCGCCCGTCGTCTTGAACCCCGCACCCAACCCCAGTAGCGACGATCGC GGCGAGTTCCGGCTGATCATGCCGGCCGGTAAGTATTATCTGCTGGCGACCACAAATTCCCAGGGCGGAAATGAGCGGCC CGAAGCTCGCACGGATGGAACCAGCGAAGTGCTCTATGCAGCCACGTTCTATCCCTCCGCGGTTCGCAAAGATCGCGCCG GCATGGTGGAGGCGGTGGCGGGCAAAGATGTCGCGGGGCTGGAAATCCGGCTGGCGCGCCGGCAGCAAGGTCTCTCCATC AGCGGCGTGATCACCGGGATTCCCGAAGGGCAGACGCGGCCGTGGGTGGTAATGCAGTTCGGCGAAAAACCACCGCTGCC CACCAATAGCCGCAGCACCGCCGCGGCCGCCGACGGGAAATTCAAGTTTGAATCCCTGCAGCCCGGCTTCTACCGCATAT GGGCGCAGTACAACGAGGGCAAGACGAACCTGGTCACCCGCGCGATGGAGTGGACGCTCGAAAACACCGAGATTTCCAAC GTCGAACTGGCGCTGGTTCCGGGATTTCAAGTCTCCGGTAAAGTGCGGGTGGAGGGCGATACACCCGGCCTGGGCGCAGG CAAGCACACCGTGAGGCTCGAACCCATGCTGGGTTTCGCGATAGGCAGCCTGCAGAGGGGCGGTGGCGAACTGGATGCCG AAGGGATGTTCCGCATCACGAATGTCGGGCCGAGCCGCTACAAGTTGCGCGTCGAGCCCCTCGCGGAAGGACTGTACATC AAGACGGTGGAGATCGATGGCGCCGCCTCGCCGGCCGATGTGATCGATCTTTCGAATGCGTCGAAGGGTGTGAATGCCAG TGTCCTGCTGGGGCGCAACGGCGTCGTGGTTTCCGGCCGTGTGCTGGATTCCAACGGTGAGCGCATGCCGGCCAATCTGG TGATGATTTATCTGATTAAGGAATTCACCGAGATCTTGAGCGGCGCCAACAGCAACGGTACCGCGCAGGCAGAGCCGGAT GGCACCTACAAGCTGAGAGCCTTCGCTCCCGGCAAGTATAAGCTGTTCGCAATCGACGCGCTGCGGATCTCCGGTGGTCC GGCCGTGATCGACATGCTGCAGGACATGTTCAATCGCGCCGAGGAAGTGGAATTCAAGGAAGGCGAAAAAGTAACCAGGG ACCTGCGGGTGATGGCGACGAAGGAGGATCCGAATGCGAAGAAGAAGTAG
Upstream 100 bases:
>100_bases GAGCGATCCAGCTAGTGCTTTTGTTCACTACGTCTGCGCAACGAGCTTCGCCCGTCGATGCGCTTCCATCCGACATTGAG ATCCGTTATAGTCGTTCCAA
Downstream 100 bases:
>100_bases CGCGGCGCTCTTTCTCACCCTGGCGATGGCCGCCGCGGCGTTCACCCAGACCCAGCCGCCGCGCGCCGACGAAAAACCGG CGTCGGTCGAAGGCGAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MKSAVLLLLAGACLCAQQQGSVEGIATDAVTHEPLSNVHVRLIAASFAGINGAYGAMSDRTGHFSIASIRPGTYILLPER PGYLLVQTKGEAGIPSITIKPGEQVAGYQLEMTPRAVLAGRVVDEAGDPVQGVKVQAQPAAPEGSPVVLNPAPNPSSDDR GEFRLIMPAGKYYLLATTNSQGGNERPEARTDGTSEVLYAATFYPSAVRKDRAGMVEAVAGKDVAGLEIRLARRQQGLSI SGVITGIPEGQTRPWVVMQFGEKPPLPTNSRSTAAAADGKFKFESLQPGFYRIWAQYNEGKTNLVTRAMEWTLENTEISN VELALVPGFQVSGKVRVEGDTPGLGAGKHTVRLEPMLGFAIGSLQRGGGELDAEGMFRITNVGPSRYKLRVEPLAEGLYI KTVEIDGAASPADVIDLSNASKGVNASVLLGRNGVVVSGRVLDSNGERMPANLVMIYLIKEFTEILSGANSNGTAQAEPD GTYKLRAFAPGKYKLFAIDALRISGGPAVIDMLQDMFNRAEEVEFKEGEKVTRDLRVMATKEDPNAKKK
Sequences:
>Translated_549_residues MKSAVLLLLAGACLCAQQQGSVEGIATDAVTHEPLSNVHVRLIAASFAGINGAYGAMSDRTGHFSIASIRPGTYILLPER PGYLLVQTKGEAGIPSITIKPGEQVAGYQLEMTPRAVLAGRVVDEAGDPVQGVKVQAQPAAPEGSPVVLNPAPNPSSDDR GEFRLIMPAGKYYLLATTNSQGGNERPEARTDGTSEVLYAATFYPSAVRKDRAGMVEAVAGKDVAGLEIRLARRQQGLSI SGVITGIPEGQTRPWVVMQFGEKPPLPTNSRSTAAAADGKFKFESLQPGFYRIWAQYNEGKTNLVTRAMEWTLENTEISN VELALVPGFQVSGKVRVEGDTPGLGAGKHTVRLEPMLGFAIGSLQRGGGELDAEGMFRITNVGPSRYKLRVEPLAEGLYI KTVEIDGAASPADVIDLSNASKGVNASVLLGRNGVVVSGRVLDSNGERMPANLVMIYLIKEFTEILSGANSNGTAQAEPD GTYKLRAFAPGKYKLFAIDALRISGGPAVIDMLQDMFNRAEEVEFKEGEKVTRDLRVMATKEDPNAKKK >Mature_549_residues MKSAVLLLLAGACLCAQQQGSVEGIATDAVTHEPLSNVHVRLIAASFAGINGAYGAMSDRTGHFSIASIRPGTYILLPER PGYLLVQTKGEAGIPSITIKPGEQVAGYQLEMTPRAVLAGRVVDEAGDPVQGVKVQAQPAAPEGSPVVLNPAPNPSSDDR GEFRLIMPAGKYYLLATTNSQGGNERPEARTDGTSEVLYAATFYPSAVRKDRAGMVEAVAGKDVAGLEIRLARRQQGLSI SGVITGIPEGQTRPWVVMQFGEKPPLPTNSRSTAAAADGKFKFESLQPGFYRIWAQYNEGKTNLVTRAMEWTLENTEISN VELALVPGFQVSGKVRVEGDTPGLGAGKHTVRLEPMLGFAIGSLQRGGGELDAEGMFRITNVGPSRYKLRVEPLAEGLYI KTVEIDGAASPADVIDLSNASKGVNASVLLGRNGVVVSGRVLDSNGERMPANLVMIYLIKEFTEILSGANSNGTAQAEPD GTYKLRAFAPGKYKLFAIDALRISGGPAVIDMLQDMFNRAEEVEFKEGEKVTRDLRVMATKEDPNAKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58527; Mature: 58527
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSAVLLLLAGACLCAQQQGSVEGIATDAVTHEPLSNVHVRLIAASFAGINGAYGAMSDR CCCEEEEEEHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCC TGHFSIASIRPGTYILLPERPGYLLVQTKGEAGIPSITIKPGEQVAGYQLEMTPRAVLAG CCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCEEEEECCHHHHCC RVVDEAGDPVQGVKVQAQPAAPEGSPVVLNPAPNPSSDDRGEFRLIMPAGKYYLLATTNS HHHHCCCCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCEEEEEECCC QGGNERPEARTDGTSEVLYAATFYPSAVRKDRAGMVEAVAGKDVAGLEIRLARRQQGLSI CCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCEEECCCCCCCCEEEEEEHHHCCCEE SGVITGIPEGQTRPWVVMQFGEKPPLPTNSRSTAAAADGKFKFESLQPGFYRIWAQYNEG EEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEECCCCEEEECCCCCEEEEEEEECCC KTNLVTRAMEWTLENTEISNVELALVPGFQVSGKVRVEGDTPGLGAGKHTVRLEPMLGFA CHHHEEEEEEEEECCCEECCEEEEEECCEEECCEEEECCCCCCCCCCCEEEEECCHHHHH IGSLQRGGGELDAEGMFRITNVGPSRYKLRVEPLAEGLYIKTVEIDGAASPADVIDLSNA HHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEEEEECCCCCCCCEEEECCC SKGVNASVLLGRNGVVVSGRVLDSNGERMPANLVMIYLIKEFTEILSGANSNGTAQAEPD CCCCCEEEEECCCCEEEEEEEECCCCCCCCHHHEEHHHHHHHHHHHCCCCCCCEEECCCC GTYKLRAFAPGKYKLFAIDALRISGGPAVIDMLQDMFNRAEEVEFKEGEKVTRDLRVMAT CCEEEEEECCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHCEEEEEEEE KEDPNAKKK CCCCCCCCC >Mature Secondary Structure MKSAVLLLLAGACLCAQQQGSVEGIATDAVTHEPLSNVHVRLIAASFAGINGAYGAMSDR CCCEEEEEEHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCC TGHFSIASIRPGTYILLPERPGYLLVQTKGEAGIPSITIKPGEQVAGYQLEMTPRAVLAG CCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCEEEEECCHHHHCC RVVDEAGDPVQGVKVQAQPAAPEGSPVVLNPAPNPSSDDRGEFRLIMPAGKYYLLATTNS HHHHCCCCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCEEEEEECCC QGGNERPEARTDGTSEVLYAATFYPSAVRKDRAGMVEAVAGKDVAGLEIRLARRQQGLSI CCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCEEECCCCCCCCEEEEEEHHHCCCEE SGVITGIPEGQTRPWVVMQFGEKPPLPTNSRSTAAAADGKFKFESLQPGFYRIWAQYNEG EEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEECCCCEEEECCCCCEEEEEEEECCC KTNLVTRAMEWTLENTEISNVELALVPGFQVSGKVRVEGDTPGLGAGKHTVRLEPMLGFA CHHHEEEEEEEEECCCEECCEEEEEECCEEECCEEEECCCCCCCCCCCEEEEECCHHHHH IGSLQRGGGELDAEGMFRITNVGPSRYKLRVEPLAEGLYIKTVEIDGAASPADVIDLSNA HHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEEEEECCCCCCCCEEEECCC SKGVNASVLLGRNGVVVSGRVLDSNGERMPANLVMIYLIKEFTEILSGANSNGTAQAEPD CCCCCEEEEECCCCEEEEEEEECCCCCCCCHHHEEHHHHHHHHHHHCCCCCCCEEECCCC GTYKLRAFAPGKYKLFAIDALRISGGPAVIDMLQDMFNRAEEVEFKEGEKVTRDLRVMAT CCEEEEEECCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHCEEEEEEEE KEDPNAKKK CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA