| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116620644
Identifier: 116620644
GI number: 116620644
Start: 1867987
End: 1868400
Strand: Reverse
Name: 116620644
Synonym: Acid_1523
Alternate gene names: NA
Gene position: 1868400-1867987 (Counterclockwise)
Preceding gene: 116620649
Following gene: 116620642
Centisome position: 18.75
GC content: 60.14
Gene sequence:
>414_bases ATGAGCGTCTGGCCAAAAGTTTCGCCGGTCACACCTTCGCTTTCGACCGCCGAGGGAACGTTGGTTTCCATCTCCATTCA TGTGGAGCCCCACCAGTTGGAATCCCTGCTGGATTCCCTGGCCCAACTGAGCTTTCCGATTAACCCGCAGATCTATCACG ATGCCGCCATGGTGTATCGCTACCCCGATGGCAGCGAGGAATCCGAATCCATCACTCTGGTGGAATTCCCCGCCTACGCC AGTCGGATCGAGGAAGTGCGGCGCGGTCTGGAGTCGTACAGTTTCGACCCGGGCTGCATCCGCGTCACCGGAATGCTCGA CGAGATTCAATCGGAGCTGCAGCCCGAGCCTGCGCCGGCAGGCGTAGCTTACGTCTCGCGCTTTCGGGTCAAGCGCCGGG CAGCGATAGCGTAA
Upstream 100 bases:
>100_bases AAGGCGAGTCGGTCTGTTCAAGAAACATTCGACCCTGGCGCCTTGTGGCTCCAGGGTTTTTTGTCGAATAGGCCCCTTCG CCGGATGCTGGAGGATTACG
Downstream 100 bases:
>100_bases TCATTAATAGGAGTAGCGCTCCTCAAGCCACGGATCGCCGCGCATGTGATAGCCGTTGGCTTCCCAGAATCCCGGTTTAT CCTTCTCTATCAGCTCGACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSVWPKVSPVTPSLSTAEGTLVSISIHVEPHQLESLLDSLAQLSFPINPQIYHDAAMVYRYPDGSEESESITLVEFPAYA SRIEEVRRGLESYSFDPGCIRVTGMLDEIQSELQPEPAPAGVAYVSRFRVKRRAAIA
Sequences:
>Translated_137_residues MSVWPKVSPVTPSLSTAEGTLVSISIHVEPHQLESLLDSLAQLSFPINPQIYHDAAMVYRYPDGSEESESITLVEFPAYA SRIEEVRRGLESYSFDPGCIRVTGMLDEIQSELQPEPAPAGVAYVSRFRVKRRAAIA >Mature_136_residues SVWPKVSPVTPSLSTAEGTLVSISIHVEPHQLESLLDSLAQLSFPINPQIYHDAAMVYRYPDGSEESESITLVEFPAYAS RIEEVRRGLESYSFDPGCIRVTGMLDEIQSELQPEPAPAGVAYVSRFRVKRRAAIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15150; Mature: 15019
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVWPKVSPVTPSLSTAEGTLVSISIHVEPHQLESLLDSLAQLSFPINPQIYHDAAMVYR CCCCCCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCEECCEEEEEE YPDGSEESESITLVEFPAYASRIEEVRRGLESYSFDPGCIRVTGMLDEIQSELQPEPAPA CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCCCC GVAYVSRFRVKRRAAIA HHHHHHHHHHHHHHCCC >Mature Secondary Structure SVWPKVSPVTPSLSTAEGTLVSISIHVEPHQLESLLDSLAQLSFPINPQIYHDAAMVYR CCCCCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCEECCEEEEEE YPDGSEESESITLVEFPAYASRIEEVRRGLESYSFDPGCIRVTGMLDEIQSELQPEPAPA CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCCCC GVAYVSRFRVKRRAAIA HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA