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The map label for this gene is yrbE [H]

Identifier: 116620639

GI number: 116620639

Start: 1863199

End: 1864209

Strand: Reverse

Name: yrbE [H]

Synonym: Acid_1518

Alternate gene names: 116620639

Gene position: 1864209-1863199 (Counterclockwise)

Preceding gene: 116620641

Following gene: 116620629

Centisome position: 18.71

GC content: 61.82

Gene sequence:

>1011_bases
ATGAGAGTCGGAATGATCGGCACGGGCGCCATCTCGCACAAACACGCCCAAGCCTACAAGAATATTGGTTTTCAGTTGAC
CGTGTGCACGGATATCAACGAGACCTACGGGCGCAAGTTCGCCGACCAGTACGGCGCCGAGTTCGTCCCCACCTACGAGC
AGGTCTGCCGGCATTCCAACGTGGATTACGTTGATGTTTGCACCTTCCCCGATTTCCGCATGCAGCCGATCGCGATCTGC
GCCGAAGCCGGCAAGCATGTCCAGGTGCAAAAGCCGATATCCACGGACCTCGAAACCGCCCGCCTGATGCTCGATACCGC
GCGCCAGGCCGGCATTCTGCTCGGCGTGGTCAGCCAGCATCGCTTCGACGATGCCAGCCTCTTCCTCTCCAAGGCGATCG
CCGATGGCCGCCTCGGCAAATTGCTGCAGGCCGATTGCTACGTGAAATGGTTCCGCTCCGCCGACTACTATTCCCGGCCT
ATCAAAGGCAGTTGGAAGACCGAAGGCGGCGGCGCGCTGATCAACCAGGCCATCCACGGGATCGATATCCTGCGCTGGCT
GGCCGGCCCCGTGAAGGAGCTCTTCGCCGTCTGGCAGCTCGGCGCGCTGCACAAAATCGAATCCGAAGACGTGGTCAACG
CCGTCATGAAATTCTCCAGCGGCGCCACCGGCGTGGTGCAGGCCTCCACCGCATTCTGGCCGGGTTACACCGAGCGCACC
GAATTTCACGGCACTAAAGGCACCGCCATCATCTCCGGCGACAAGCTGACCACATGGGATGTGGAGAACGATTCCGGCGA
ACCCGCTCCCGTAGCCAAGGAAGTGGCCTCCGGCGCCAGCGACCCGATGGCCATCTCACTCGAGCCCTTCGAGCGCCAGT
TCCTGGATTTCGGCGAAGCCATCGCCAAAGGCCGCAAACCGCGAGTCGCCGGCGAAGAGGGGTACCAGGCCCTCGAAATC
GTCGATGCCGTCTATCGCTCCTGCCGCACCGGGGAAAAAATCACGCTCTGA

Upstream 100 bases:

>100_bases
AAAGACAACAAAAATGCGCTTCATTTGTATGGTTGGCTAACCCTTTATTGTATCCTGTAGCACCCGCCTCAACATAAAGC
TCGCTAGAATAGTCGTACCC

Downstream 100 bases:

>100_bases
CCACGAGCCGCGACCGCCTCGTTGGATCCACTTTACTCTAGCCAGGTATCGAGGTATTCGAGGTACGCGGTTGCCAGGCG
GTACGTGGCGTAATACTCAT

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MRVGMIGTGAISHKHAQAYKNIGFQLTVCTDINETYGRKFADQYGAEFVPTYEQVCRHSNVDYVDVCTFPDFRMQPIAIC
AEAGKHVQVQKPISTDLETARLMLDTARQAGILLGVVSQHRFDDASLFLSKAIADGRLGKLLQADCYVKWFRSADYYSRP
IKGSWKTEGGGALINQAIHGIDILRWLAGPVKELFAVWQLGALHKIESEDVVNAVMKFSSGATGVVQASTAFWPGYTERT
EFHGTKGTAIISGDKLTTWDVENDSGEPAPVAKEVASGASDPMAISLEPFERQFLDFGEAIAKGRKPRVAGEEGYQALEI
VDAVYRSCRTGEKITL

Sequences:

>Translated_336_residues
MRVGMIGTGAISHKHAQAYKNIGFQLTVCTDINETYGRKFADQYGAEFVPTYEQVCRHSNVDYVDVCTFPDFRMQPIAIC
AEAGKHVQVQKPISTDLETARLMLDTARQAGILLGVVSQHRFDDASLFLSKAIADGRLGKLLQADCYVKWFRSADYYSRP
IKGSWKTEGGGALINQAIHGIDILRWLAGPVKELFAVWQLGALHKIESEDVVNAVMKFSSGATGVVQASTAFWPGYTERT
EFHGTKGTAIISGDKLTTWDVENDSGEPAPVAKEVASGASDPMAISLEPFERQFLDFGEAIAKGRKPRVAGEEGYQALEI
VDAVYRSCRTGEKITL
>Mature_336_residues
MRVGMIGTGAISHKHAQAYKNIGFQLTVCTDINETYGRKFADQYGAEFVPTYEQVCRHSNVDYVDVCTFPDFRMQPIAIC
AEAGKHVQVQKPISTDLETARLMLDTARQAGILLGVVSQHRFDDASLFLSKAIADGRLGKLLQADCYVKWFRSADYYSRP
IKGSWKTEGGGALINQAIHGIDILRWLAGPVKELFAVWQLGALHKIESEDVVNAVMKFSSGATGVVQASTAFWPGYTERT
EFHGTKGTAIISGDKLTTWDVENDSGEPAPVAKEVASGASDPMAISLEPFERQFLDFGEAIAKGRKPRVAGEEGYQALEI
VDAVYRSCRTGEKITL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=365, Percent_Identity=25.7534246575342, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI87081947, Length=262, Percent_Identity=28.6259541984733, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36865; Mature: 36865

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVGMIGTGAISHKHAQAYKNIGFQLTVCTDINETYGRKFADQYGAEFVPTYEQVCRHSN
CEECEEECCCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHCCCC
VDYVDVCTFPDFRMQPIAICAEAGKHVQVQKPISTDLETARLMLDTARQAGILLGVVSQH
CCEEEEECCCCCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHEEHHHHC
RFDDASLFLSKAIADGRLGKLLQADCYVKWFRSADYYSRPIKGSWKTEGGGALINQAIHG
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHH
IDILRWLAGPVKELFAVWQLGALHKIESEDVVNAVMKFSSGATGVVQASTAFWPGYTERT
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC
EFHGTKGTAIISGDKLTTWDVENDSGEPAPVAKEVASGASDPMAISLEPFERQFLDFGEA
CCCCCCCCEEEECCEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECHHHHHHHHHHHH
IAKGRKPRVAGEEGYQALEIVDAVYRSCRTGEKITL
HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRVGMIGTGAISHKHAQAYKNIGFQLTVCTDINETYGRKFADQYGAEFVPTYEQVCRHSN
CEECEEECCCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHCCCC
VDYVDVCTFPDFRMQPIAICAEAGKHVQVQKPISTDLETARLMLDTARQAGILLGVVSQH
CCEEEEECCCCCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHEEHHHHC
RFDDASLFLSKAIADGRLGKLLQADCYVKWFRSADYYSRPIKGSWKTEGGGALINQAIHG
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHH
IDILRWLAGPVKELFAVWQLGALHKIESEDVVNAVMKFSSGATGVVQASTAFWPGYTERT
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC
EFHGTKGTAIISGDKLTTWDVENDSGEPAPVAKEVASGASDPMAISLEPFERQFLDFGEA
CCCCCCCCEEEECCEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECHHHHHHHHHHHH
IAKGRKPRVAGEEGYQALEIVDAVYRSCRTGEKITL
HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]