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The map label for this gene is ycdQ [C]

Identifier: 116620612

GI number: 116620612

Start: 1828702

End: 1829826

Strand: Direct

Name: ycdQ [C]

Synonym: Acid_1491

Alternate gene names: 116620612

Gene position: 1828702-1829826 (Clockwise)

Preceding gene: 116620610

Following gene: 116620613

Centisome position: 18.35

GC content: 65.96

Gene sequence:

>1125_bases
GTGCTTGCCTGGCTGCTGCTGGCCCTGGTCACGGGCTCGCTGGTCTACTGCGTTCTCACGATAATCGCCGCGATCCGGTA
CCGCGCGGTGCGGCCGCCCGAACTGCGCGCGGCGATGCCGATCAGCGTGCTGAAGCCGCTGGCGGGCGTGGATGAGGGGC
TGGAAGAGAATCTGCGCAGCTTTTTCGAACAGGATTACGGAGAGTTCGAAATTTTGTTCGCGGTGCGCAAGCCGGATGAC
GCGGCGATCGCGGTGGCGGAGCGGTTGCGCGCGCGGTATCCGGACGTGCCTTCGCGGTTGATCGTGACGGGCGAGCCGCC
GTACGCCAACGCGAAAGTGTACAGCCTGGATTTGATGCTGGGGGCGGCGCGGCACGACCTGCTGGTGATGGCGGACAGCG
ACATCCGGGTGACGCGGGAGATGCTGAGGACGATCGCGGCGGAGTTTCAGGATCCTGCGCTGGGCCTGGCGACGTGCCCG
TATCGTGCGGTGCCGGGGCGGAGCTTTTGGAATACGCTGGAGGCGATCGGGCTAAATACGGAATTCATCGGCGGCGTGCT
GGTAGCGCGGATGCTGGATGGTATGAAGTTCGCGCTGGGGCCGACGATCGCGGCGCGGCGGGCGACGCTGGCGGGGATCG
GCGGGTTCGACGCGGTGAAAGATTTCCTGGCCGAGGATTTCGTGATGGGAAAGCTGGCCGCGGAGCGCGGGGACGGCGTG
ATTCTCTCGTCCTACGTGATTGAGCATCGCATCGGGGCGCAGGGGCTGCTGGCGAATTTGAAGCACAGGCTGCGGTGGAA
TCGGAGCACGCGCCGATCGCGCCCGGCGGGGTATGTGGGGCAGTTGTTCACCAATCCTCTGCCGCTGGCGCTGATGTTGT
ATGCGGTACGGCCGGAGTGGTGGCCGGTGGCGGCGGCGACGGTGGTGCTCCGCGCGGGGGCGGGATGGGCAACGGCGGGG
CGCGTGCTGCGGGATCCGTTGACGGCGCGGTTGTTTTTTCTGGTGCCGGTGCAGGATCTGTTGAGCTTCGCGATGTGGGT
GGGGGGATTCTTCGGGAATACGATTTTGTGGCGCGGGCGGAAGTATTATCTGCAGGCGGATGGGCGGTTCGAGCTGGTGA
GGTAG

Upstream 100 bases:

>100_bases
CTTTGACGAGCGCGGTTTTGCCGTGGTCGATGTGTCCGGCGGTGCCGACGATGATGTGCTTCACAGATTCATTGTAGGGT
GCGTGGGTTAGATTAGGAGT

Downstream 100 bases:

>100_bases
AGAGGGGCGCGCTGTACAATGGTCCACGATGAATCGCCTCGAGGAATTACGGCGCCGGCACGCGGCTGCGGAGCAGGGCG
GCGGGCCGGAGCGCAAGGCC

Product: ceramide glucosyltransferase

Products: UDP; D-glucosyl-N-acylsphingosine

Alternate protein names: Glycosyltransferase; Glycosyl Transferase Family Protein; Glucosyltransferase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Glycosyl Transferase Group 2 Family; Glycosyl Transferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase-Like Protein; UDP-GlucoseCeramide Glycosyltransferase; Glycosyl Transferase Protein; Glycosyl Tranferase Homolog; Syl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Putatiave Glycosyltransferase

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MLAWLLLALVTGSLVYCVLTIIAAIRYRAVRPPELRAAMPISVLKPLAGVDEGLEENLRSFFEQDYGEFEILFAVRKPDD
AAIAVAERLRARYPDVPSRLIVTGEPPYANAKVYSLDLMLGAARHDLLVMADSDIRVTREMLRTIAAEFQDPALGLATCP
YRAVPGRSFWNTLEAIGLNTEFIGGVLVARMLDGMKFALGPTIAARRATLAGIGGFDAVKDFLAEDFVMGKLAAERGDGV
ILSSYVIEHRIGAQGLLANLKHRLRWNRSTRRSRPAGYVGQLFTNPLPLALMLYAVRPEWWPVAAATVVLRAGAGWATAG
RVLRDPLTARLFFLVPVQDLLSFAMWVGGFFGNTILWRGRKYYLQADGRFELVR

Sequences:

>Translated_374_residues
MLAWLLLALVTGSLVYCVLTIIAAIRYRAVRPPELRAAMPISVLKPLAGVDEGLEENLRSFFEQDYGEFEILFAVRKPDD
AAIAVAERLRARYPDVPSRLIVTGEPPYANAKVYSLDLMLGAARHDLLVMADSDIRVTREMLRTIAAEFQDPALGLATCP
YRAVPGRSFWNTLEAIGLNTEFIGGVLVARMLDGMKFALGPTIAARRATLAGIGGFDAVKDFLAEDFVMGKLAAERGDGV
ILSSYVIEHRIGAQGLLANLKHRLRWNRSTRRSRPAGYVGQLFTNPLPLALMLYAVRPEWWPVAAATVVLRAGAGWATAG
RVLRDPLTARLFFLVPVQDLLSFAMWVGGFFGNTILWRGRKYYLQADGRFELVR
>Mature_374_residues
MLAWLLLALVTGSLVYCVLTIIAAIRYRAVRPPELRAAMPISVLKPLAGVDEGLEENLRSFFEQDYGEFEILFAVRKPDD
AAIAVAERLRARYPDVPSRLIVTGEPPYANAKVYSLDLMLGAARHDLLVMADSDIRVTREMLRTIAAEFQDPALGLATCP
YRAVPGRSFWNTLEAIGLNTEFIGGVLVARMLDGMKFALGPTIAARRATLAGIGGFDAVKDFLAEDFVMGKLAAERGDGV
ILSSYVIEHRIGAQGLLANLKHRLRWNRSTRRSRPAGYVGQLFTNPLPLALMLYAVRPEWWPVAAATVVLRAGAGWATAG
RVLRDPLTARLFFLVPVQDLLSFAMWVGGFFGNTILWRGRKYYLQADGRFELVR

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4507811, Length=253, Percent_Identity=30.0395256916996, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI25147526, Length=354, Percent_Identity=23.728813559322, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI32566973, Length=269, Percent_Identity=27.5092936802974, Blast_Score=98, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI32564728, Length=246, Percent_Identity=26.0162601626016, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI25149574, Length=246, Percent_Identity=26.0162601626016, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI25149577, Length=246, Percent_Identity=26.0162601626016, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI25149580, Length=246, Percent_Identity=26.0162601626016, Blast_Score=88, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24657569, Length=206, Percent_Identity=31.0679611650485, Blast_Score=100, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.4.1.80

Molecular weight: Translated: 41367; Mature: 41367

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAWLLLALVTGSLVYCVLTIIAAIRYRAVRPPELRAAMPISVLKPLAGVDEGLEENLRS
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHCCHHHHHHHHHH
FFEQDYGEFEILFAVRKPDDAAIAVAERLRARYPDVPSRLIVTGEPPYANAKVYSLDLML
HHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEEEH
GAARHDLLVMADSDIRVTREMLRTIAAEFQDPALGLATCPYRAVPGRSFWNTLEAIGLNT
HCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCH
EFIGGVLVARMLDGMKFALGPTIAARRATLAGIGGFDAVKDFLAEDFVMGKLAAERGDGV
HHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCE
ILSSYVIEHRIGAQGLLANLKHRLRWNRSTRRSRPAGYVGQLFTNPLPLALMLYAVRPEW
EHHHHHHHHHCCHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHCCCHHHHHHHHHHCCCC
WPVAAATVVLRAGAGWATAGRVLRDPLTARLFFLVPVQDLLSFAMWVGGFFGNTILWRGR
CHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHEECHHHHHHHHHHHHHHHCCEEEECCC
KYYLQADGRFELVR
EEEEEECCEEEECC
>Mature Secondary Structure
MLAWLLLALVTGSLVYCVLTIIAAIRYRAVRPPELRAAMPISVLKPLAGVDEGLEENLRS
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHCCHHHHHHHHHH
FFEQDYGEFEILFAVRKPDDAAIAVAERLRARYPDVPSRLIVTGEPPYANAKVYSLDLML
HHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEEEH
GAARHDLLVMADSDIRVTREMLRTIAAEFQDPALGLATCPYRAVPGRSFWNTLEAIGLNT
HCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCH
EFIGGVLVARMLDGMKFALGPTIAARRATLAGIGGFDAVKDFLAEDFVMGKLAAERGDGV
HHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCE
ILSSYVIEHRIGAQGLLANLKHRLRWNRSTRRSRPAGYVGQLFTNPLPLALMLYAVRPEW
EHHHHHHHHHCCHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHCCCHHHHHHHHHHCCCC
WPVAAATVVLRAGAGWATAGRVLRDPLTARLFFLVPVQDLLSFAMWVGGFFGNTILWRGR
CHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHEECHHHHHHHHHHHHHHHCCEEEECCC
KYYLQADGRFELVR
EEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: UDP-glucose; N-acylsphingosine

Specific reaction: UDP-glucose + N-acylsphingosine = UDP + D-glucosyl-N-acylsphingosine

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA