| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is yneN [H]
Identifier: 116620608
GI number: 116620608
Start: 1824633
End: 1825151
Strand: Direct
Name: yneN [H]
Synonym: Acid_1487
Alternate gene names: 116620608
Gene position: 1824633-1825151 (Clockwise)
Preceding gene: 116620607
Following gene: 116620609
Centisome position: 18.31
GC content: 64.55
Gene sequence:
>519_bases ATGAAGAAACTTGCGATTGCATTATTGTGCGCGATGGCGCTGACGGGCGCGGACGCACCGAGGCGCGCGCCCGGGTTCTG CCTGCCGGATCAGACCATGCAGTGGAGGGACCTGGCGGACTATCGCGGAAAAGTGGTGGTGCTGGAGTTCATGCAATCCA CCTGTCCGCACTGCGCCGCGTTCGTGCCGGTGCTGACCAGCCTGCAGCAGAAGTACGCGGGCAGGCTCCAGGTGATTTCG GTGGCGGTGGCGCCGGATCCGCCGCAGGCCGTGGTGCAGTTCGCCACGGGACACAAGCTCACCTACCCGCTGCTCTACGA CAGCGGCCAGATGACGATGTCGTACGTGCGCGCGCAGGGGGTGGATTTCCCGACCGTATACCTGATTGACGCGGCGGGAA TGATCCGCGGCAGTTGGGCGAACGGTCCGATGACGAAGGACTTCTTCGAAGGCAACGGGATCACGCGCGAGGTGGATAAA CTGATGGCGGGCGCTCCGGCGGCGGCGGGGAAGAAGTAG
Upstream 100 bases:
>100_bases TCGACGTTACGCCCGCGCGATACGTCACGGGGATTATCACGGAGAAGGGCGTGGCGCACGCGCCATACGAAGAATCTTTG AAGAAACTGGTGACAACGAA
Downstream 100 bases:
>100_bases GAGCGAGGGAGAAGGTACAATAAGCAGCTATGATCGGGCTATTTAAGAATCGGACGCCCGCCCCGCAACCGCTGGGTCCG CTGGAAATCACGCTGATGGA
Product: redoxin domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKKLAIALLCAMALTGADAPRRAPGFCLPDQTMQWRDLADYRGKVVVLEFMQSTCPHCAAFVPVLTSLQQKYAGRLQVIS VAVAPDPPQAVVQFATGHKLTYPLLYDSGQMTMSYVRAQGVDFPTVYLIDAAGMIRGSWANGPMTKDFFEGNGITREVDK LMAGAPAAAGKK
Sequences:
>Translated_172_residues MKKLAIALLCAMALTGADAPRRAPGFCLPDQTMQWRDLADYRGKVVVLEFMQSTCPHCAAFVPVLTSLQQKYAGRLQVIS VAVAPDPPQAVVQFATGHKLTYPLLYDSGQMTMSYVRAQGVDFPTVYLIDAAGMIRGSWANGPMTKDFFEGNGITREVDK LMAGAPAAAGKK >Mature_172_residues MKKLAIALLCAMALTGADAPRRAPGFCLPDQTMQWRDLADYRGKVVVLEFMQSTCPHCAAFVPVLTSLQQKYAGRLQVIS VAVAPDPPQAVVQFATGHKLTYPLLYDSGQMTMSYVRAQGVDFPTVYLIDAAGMIRGSWANGPMTKDFFEGNGITREVDK LMAGAPAAAGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 18573; Mature: 18573
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLAIALLCAMALTGADAPRRAPGFCLPDQTMQWRDLADYRGKVVVLEFMQSTCPHCAA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEHHHHCCCCHHHH FVPVLTSLQQKYAGRLQVISVAVAPDPPQAVVQFATGHKLTYPLLYDSGQMTMSYVRAQG HHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHCC VDFPTVYLIDAAGMIRGSWANGPMTKDFFEGNGITREVDKLMAGAPAAAGKK CCCCEEEEEECCCCEECCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKKLAIALLCAMALTGADAPRRAPGFCLPDQTMQWRDLADYRGKVVVLEFMQSTCPHCAA CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEHHHHCCCCHHHH FVPVLTSLQQKYAGRLQVISVAVAPDPPQAVVQFATGHKLTYPLLYDSGQMTMSYVRAQG HHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHCC VDFPTVYLIDAAGMIRGSWANGPMTKDFFEGNGITREVDKLMAGAPAAAGKK CCCCEEEEEECCCCEECCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]