| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is iolE [H]
Identifier: 116620605
GI number: 116620605
Start: 1821295
End: 1822227
Strand: Direct
Name: iolE [H]
Synonym: Acid_1484
Alternate gene names: 116620605
Gene position: 1821295-1822227 (Clockwise)
Preceding gene: 116620604
Following gene: 116620606
Centisome position: 18.28
GC content: 63.77
Gene sequence:
>933_bases ATGGCAAAACTACTGGTCGGCAACGCCCCTTGTTCCTGGGGCAGGTTGGAATTCGATGAAGCGAAGGGAGAGCAAATCCC GTTTAACCGCATGCTCGACGAGCTTGCTGAAACCGGCTATACGGGAACCGAGCTGGGTGATTGGGGCTATATGCCCACGG ACCCGGCGGGGCTGAAGGGGGAGCTCGACAAGCGCGGGCTGATGATGCTGGGCGCGTTTGTACCGGTTGCATTGAAGGAC CCCTCGGCGCATGAGGTGGGGATTGCGAATGCGGTCAAGACGGCGCGATTGCTGGCGGCCGTCGGGGGCAATCCCGCGCC CTACCTGGTGCTGGCCGATGATAATGGCACGGTGTTGGACCGGACGCGGATGGCGGGCCGGGTGACCGAGCAACTGGGGC TGACACCTTCGGAGTGGAGAATTTTCGCGCGCGGCGCCGATGGCGTGGCGCGGGCCGTGCACGAGGAAACCGGACTGCGA ACGGTCTTCCACCATCATTGCGCGGGCTATGTGGAGACGCCGGACGAGATCGCGACGCTGCTGGCGCTGACGGACCCGAA GCGGCTTGGCCTGGTGTTCGATACCGGCCACTATTGCTACGGAGCGGGCGGCAGGGATTGCGACGTGGCGGCGGCGCTGG AGCGTTTCGGCGACCGGGTCTGGTACATACACTGCAAGGACTGCGACCCGGAAGTGGCACAGCGGGCACGGTGGAAGCAG TGGGATTATTTCACCGCACTGCGCAATGGCGTGTTCTGCGAACTGGGCAAGGGCTGCGTGGATTTTCCGGGGCTGCTGCG CAGTTTGGCGGGCCGCGCATACGAGGGTTACGTGCTGGTGGAGCAGGATGTGCTGCCCGGGATGGGCAGTCCGAAAGAGA GCGCGCGTCGAAATCGCGACTACCTGCGGTCGATCGAATCGAATTTTGCCTGA
Upstream 100 bases:
>100_bases TGACGGAAAGCCCCTGGCAGGCCGGCAATGCGCCTGTAGCGCGGCGGCCTGCCCGAATCAACCGCGAAGTCCGGTCAAAC GACTTTCCGAGAGGAAGCAC
Downstream 100 bases:
>100_bases GAGGAAAACGTGAGCACAAGACAGTTGAATGTAGGAATCATCGGCGCGGGACGGATCGGAAAAGTGCATGCGGAAACGCT GGCCTTCCGGTTGCCGGAGG
Product: xylose isomerase domain-containing protein
Products: NA
Alternate protein names: 2-keto-myo-inositol dehydratase; 2KMI dehydratase [H]
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MAKLLVGNAPCSWGRLEFDEAKGEQIPFNRMLDELAETGYTGTELGDWGYMPTDPAGLKGELDKRGLMMLGAFVPVALKD PSAHEVGIANAVKTARLLAAVGGNPAPYLVLADDNGTVLDRTRMAGRVTEQLGLTPSEWRIFARGADGVARAVHEETGLR TVFHHHCAGYVETPDEIATLLALTDPKRLGLVFDTGHYCYGAGGRDCDVAAALERFGDRVWYIHCKDCDPEVAQRARWKQ WDYFTALRNGVFCELGKGCVDFPGLLRSLAGRAYEGYVLVEQDVLPGMGSPKESARRNRDYLRSIESNFA
Sequences:
>Translated_310_residues MAKLLVGNAPCSWGRLEFDEAKGEQIPFNRMLDELAETGYTGTELGDWGYMPTDPAGLKGELDKRGLMMLGAFVPVALKD PSAHEVGIANAVKTARLLAAVGGNPAPYLVLADDNGTVLDRTRMAGRVTEQLGLTPSEWRIFARGADGVARAVHEETGLR TVFHHHCAGYVETPDEIATLLALTDPKRLGLVFDTGHYCYGAGGRDCDVAAALERFGDRVWYIHCKDCDPEVAQRARWKQ WDYFTALRNGVFCELGKGCVDFPGLLRSLAGRAYEGYVLVEQDVLPGMGSPKESARRNRDYLRSIESNFA >Mature_309_residues AKLLVGNAPCSWGRLEFDEAKGEQIPFNRMLDELAETGYTGTELGDWGYMPTDPAGLKGELDKRGLMMLGAFVPVALKDP SAHEVGIANAVKTARLLAAVGGNPAPYLVLADDNGTVLDRTRMAGRVTEQLGLTPSEWRIFARGADGVARAVHEETGLRT VFHHHCAGYVETPDEIATLLALTDPKRLGLVFDTGHYCYGAGGRDCDVAAALERFGDRVWYIHCKDCDPEVAQRARWKQW DYFTALRNGVFCELGKGCVDFPGLLRSLAGRAYEGYVLVEQDVLPGMGSPKESARRNRDYLRSIESNFA
Specific function: Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6/3,5-pentahydroxycyclohexanone) to 3D- (3,5/4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol) [H]
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iolE/mocC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: =4.2.1.44 [H]
Molecular weight: Translated: 33987; Mature: 33856
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLLVGNAPCSWGRLEFDEAKGEQIPFNRMLDELAETGYTGTELGDWGYMPTDPAGLKG CCCEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ELDKRGLMMLGAFVPVALKDPSAHEVGIANAVKTARLLAAVGGNPAPYLVLADDNGTVLD CCCCCHHEEHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEH RTRMAGRVTEQLGLTPSEWRIFARGADGVARAVHEETGLRTVFHHHCAGYVETPDEIATL HHHHHHHHHHHHCCCHHHCEEEEECCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHH LALTDPKRLGLVFDTGHYCYGAGGRDCDVAAALERFGDRVWYIHCKDCDPEVAQRARWKQ HHCCCCCCEEEEEECCCEEECCCCCCCHHHHHHHHHCCEEEEEEECCCCHHHHHHHCCCC WDYFTALRNGVFCELGKGCVDFPGLLRSLAGRAYEGYVLVEQDVLPGMGSPKESARRNRD HHHHHHHHCCCEEECCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH YLRSIESNFA HHHHHHHCCC >Mature Secondary Structure AKLLVGNAPCSWGRLEFDEAKGEQIPFNRMLDELAETGYTGTELGDWGYMPTDPAGLKG CCEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ELDKRGLMMLGAFVPVALKDPSAHEVGIANAVKTARLLAAVGGNPAPYLVLADDNGTVLD CCCCCHHEEHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEH RTRMAGRVTEQLGLTPSEWRIFARGADGVARAVHEETGLRTVFHHHCAGYVETPDEIATL HHHHHHHHHHHHCCCHHHCEEEEECCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHH LALTDPKRLGLVFDTGHYCYGAGGRDCDVAAALERFGDRVWYIHCKDCDPEVAQRARWKQ HHCCCCCCEEEEEECCCEEECCCCCCCHHHHHHHHHCCEEEEEEECCCCHHHHHHHCCCC WDYFTALRNGVFCELGKGCVDFPGLLRSLAGRAYEGYVLVEQDVLPGMGSPKESARRNRD HHHHHHHHCCCEEECCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH YLRSIESNFA HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA