| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is uxaA [H]
Identifier: 116620574
GI number: 116620574
Start: 1782949
End: 1784484
Strand: Direct
Name: uxaA [H]
Synonym: Acid_1453
Alternate gene names: 116620574
Gene position: 1782949-1784484 (Clockwise)
Preceding gene: 116620573
Following gene: 116620575
Centisome position: 17.89
GC content: 66.34
Gene sequence:
>1536_bases ATGCTCGTCGAAATCACCAAAGTCCCCAACGCCGAGAACTCCGTCATCCACCTCCACCCCACCGACAACGTCGCCGTCGC CCGCGTCCCCCTCCCCGCCGGCACCGAGCTCCGCGTCGATGGACTCCCGGTCACCGTCCGCGACGCCATCCCCGCCGGGC ACAAGATCGCCCTCTGGGACATCGCCCCCGGTGAAACCGTGGAGCGCTACGGCCAGGTCATCGGCCGCGCCAAACTCCCC ATCGATGCCGGACGCCACATCCACACCCACAACCTCGCCTACGAAGAGCTCGCGCTCGACTACGAATTCCCTACCACCGA AACCGCAGTCCCCACGCCGCGCCCCGACGCCCCCACCTTCCTCGGCTATCCCCGCGAGGATGGCCGCGTCGGCACCCGCA ACTACATCGCCGTCGTCGCCGCCAGCAACTGCGCCGCCCACGCCGCGGAACTCATCGCCCGCTCTTACGAAGGCGTGACT CTCCCGCCCAACGTCGATGGCGTCGTCGCCTTCCCGCACGGCGAAGGCTGCGGCCACGCCTTCGGCCCCGATGTCGATCA GCTCCGCCGCACCCTCGGCGGCGTCCTCGTTCACCCCAACGTCTCCGCCGCCCTCATCCTAGGCTTGGGCTGCGAGGTCA ACCAGATCGATCACTACCTCGGCGCCGGCTCGCCCCGCACCAATCGTCTGGTCGGCATGACCCTGCAGACCAGCGGCGGC ACCCCCGGAATCCTCGCCGCCGCGCGCCGCGAAATCGGCCGCTTCTTCGAACAGGCCGCCGCCGAAAACCGCGTCCCGGT CCCCGCGTCCAAAATCATCCTCGGCCTCAACTGCGGCGGCTCGGATTCTTTCTCCGGCATCACCGCCAACCCTGCCCTCG GCTTCTGCTCGGACCTGCTCGCCGAACTAGGCGCCGCCAGCGTACTCGCCGAAACTCCCGAAATCTTTGGCGCCGAACAC CTGCTTGTGCGCCGCGCCCGCAATCGTGAGATCGCGGACAAATTGCTCGGCTGCATCTCGCGTTACAAGAAATACCTCTC CCGCTTCGACGGCAGTTTCGACGACAACCCGTCGCCCGGCAATAAGGAAGGCGGCCTCAGCAACATCCTCGAAAAAAGCT TGGGCGCCGTCGCCAAGGGCGGCACCAGCCCCCTCATCGATGTCTATGAGTACGCCGAAAAAATCACCGCGCCCGGTTTC AGCTTCATGAACACCCCCGGTTATGACCCCGTCAGCCTCACCGGCCTCGCTGCCGGCGGCTGTAACCTGATCGCTTTCAC CACCGGCCGCGGCAGCGCCATCGGCTTCCCCACCATCCCGGTCATCAAAATATCCACCAACACCCACACCTACCGCGCCA TGCCCGACAACATGGACATCAACGCCGGCGCTATCGCGGATGGCGAGTCCACCATCCAGCAAACCGGCCGCGAGATCTTC CACGCCCTCCTTGCTATCGCCTCCGGCCGCCCCACCTGCGCCGAACGCCTCGGCCACAAAGAATTCGTCCCCTGGCGTAT CGGCCCTGTAATGTAG
Upstream 100 bases:
>100_bases CGATGGCGATGGCATGTGGGTTCACCCCGCCGGCGACCGCCTGCACGTCCACCTCGAAGAACCCGCCGGAGAACTCAAGC TCGAACGATAAAGGAACCCC
Downstream 100 bases:
>100_bases TTTGTTTTGTTTTATCCGTGTCCATCAGCGTTCATCCGCGGCCCATTTGCTTTTCTGTTCTTCCATCCGTGGCGCGCCCT GTACCCCCGGAAACCGCCAC
Product: Altronate dehydratase
Products: NA
Alternate protein names: Altronic acid hydratase [H]
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MLVEITKVPNAENSVIHLHPTDNVAVARVPLPAGTELRVDGLPVTVRDAIPAGHKIALWDIAPGETVERYGQVIGRAKLP IDAGRHIHTHNLAYEELALDYEFPTTETAVPTPRPDAPTFLGYPREDGRVGTRNYIAVVAASNCAAHAAELIARSYEGVT LPPNVDGVVAFPHGEGCGHAFGPDVDQLRRTLGGVLVHPNVSAALILGLGCEVNQIDHYLGAGSPRTNRLVGMTLQTSGG TPGILAAARREIGRFFEQAAAENRVPVPASKIILGLNCGGSDSFSGITANPALGFCSDLLAELGAASVLAETPEIFGAEH LLVRRARNREIADKLLGCISRYKKYLSRFDGSFDDNPSPGNKEGGLSNILEKSLGAVAKGGTSPLIDVYEYAEKITAPGF SFMNTPGYDPVSLTGLAAGGCNLIAFTTGRGSAIGFPTIPVIKISTNTHTYRAMPDNMDINAGAIADGESTIQQTGREIF HALLAIASGRPTCAERLGHKEFVPWRIGPVM
Sequences:
>Translated_511_residues MLVEITKVPNAENSVIHLHPTDNVAVARVPLPAGTELRVDGLPVTVRDAIPAGHKIALWDIAPGETVERYGQVIGRAKLP IDAGRHIHTHNLAYEELALDYEFPTTETAVPTPRPDAPTFLGYPREDGRVGTRNYIAVVAASNCAAHAAELIARSYEGVT LPPNVDGVVAFPHGEGCGHAFGPDVDQLRRTLGGVLVHPNVSAALILGLGCEVNQIDHYLGAGSPRTNRLVGMTLQTSGG TPGILAAARREIGRFFEQAAAENRVPVPASKIILGLNCGGSDSFSGITANPALGFCSDLLAELGAASVLAETPEIFGAEH LLVRRARNREIADKLLGCISRYKKYLSRFDGSFDDNPSPGNKEGGLSNILEKSLGAVAKGGTSPLIDVYEYAEKITAPGF SFMNTPGYDPVSLTGLAAGGCNLIAFTTGRGSAIGFPTIPVIKISTNTHTYRAMPDNMDINAGAIADGESTIQQTGREIF HALLAIASGRPTCAERLGHKEFVPWRIGPVM >Mature_511_residues MLVEITKVPNAENSVIHLHPTDNVAVARVPLPAGTELRVDGLPVTVRDAIPAGHKIALWDIAPGETVERYGQVIGRAKLP IDAGRHIHTHNLAYEELALDYEFPTTETAVPTPRPDAPTFLGYPREDGRVGTRNYIAVVAASNCAAHAAELIARSYEGVT LPPNVDGVVAFPHGEGCGHAFGPDVDQLRRTLGGVLVHPNVSAALILGLGCEVNQIDHYLGAGSPRTNRLVGMTLQTSGG TPGILAAARREIGRFFEQAAAENRVPVPASKIILGLNCGGSDSFSGITANPALGFCSDLLAELGAASVLAETPEIFGAEH LLVRRARNREIADKLLGCISRYKKYLSRFDGSFDDNPSPGNKEGGLSNILEKSLGAVAKGGTSPLIDVYEYAEKITAPGF SFMNTPGYDPVSLTGLAAGGCNLIAFTTGRGSAIGFPTIPVIKISTNTHTYRAMPDNMDINAGAIADGESTIQQTGREIF HALLAIASGRPTCAERLGHKEFVPWRIGPVM
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG2721
COG function: function code G; Altronate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uxaA family [H]
Homologues:
Organism=Escherichia coli, GI1789475, Length=501, Percent_Identity=35.7285429141717, Blast_Score=293, Evalue=2e-80, Organism=Escherichia coli, GI1789516, Length=511, Percent_Identity=37.3776908023483, Blast_Score=290, Evalue=2e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007392 - InterPro: IPR013974 [H]
Pfam domain/function: PF04295 GD_AH_C; PF08666 SAF [H]
EC number: =4.2.1.7 [H]
Molecular weight: Translated: 54024; Mature: 54024
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVEITKVPNAENSVIHLHPTDNVAVARVPLPAGTELRVDGLPVTVRDAIPAGHKIALWD CEEEEECCCCCCCCEEEEECCCCEEEEEECCCCCCEEEECCCCEEEHHCCCCCCEEEEEE IAPGETVERYGQVIGRAKLPIDAGRHIHTHNLAYEELALDYEFPTTETAVPTPRPDAPTF CCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHEEECCCCCCCCCCCCCCCCCCCC LGYPREDGRVGTRNYIAVVAASNCAAHAAELIARSYEGVTLPPNVDGVVAFPHGEGCGHA CCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCEECCCCCCEEEEECCCCCCCCC FGPDVDQLRRTLGGVLVHPNVSAALILGLGCEVNQIDHYLGAGSPRTNRLVGMTLQTSGG CCCCHHHHHHHHCCEEECCCCCEEEEEECCCCHHHHHHHHCCCCCCCCEEEEEEEECCCC TPGILAAARREIGRFFEQAAAENRVPVPASKIILGLNCGGSDSFSGITANPALGFCSDLL CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEECCCCCCCCCEECCCHHHHHHHHH AELGAASVLAETPEIFGAEHLLVRRARNREIADKLLGCISRYKKYLSRFDGSFDDNPSPG HHHCHHHHHHCCHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC NKEGGLSNILEKSLGAVAKGGTSPLIDVYEYAEKITAPGFSFMNTPGYDPVSLTGLAAGG CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCC CNLIAFTTGRGSAIGFPTIPVIKISTNTHTYRAMPDNMDINAGAIADGESTIQQTGREIF CEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH HALLAIASGRPTCAERLGHKEFVPWRIGPVM HHHHHHHCCCCHHHHHCCCCCCCCEECCCCC >Mature Secondary Structure MLVEITKVPNAENSVIHLHPTDNVAVARVPLPAGTELRVDGLPVTVRDAIPAGHKIALWD CEEEEECCCCCCCCEEEEECCCCEEEEEECCCCCCEEEECCCCEEEHHCCCCCCEEEEEE IAPGETVERYGQVIGRAKLPIDAGRHIHTHNLAYEELALDYEFPTTETAVPTPRPDAPTF CCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHEEECCCCCCCCCCCCCCCCCCCC LGYPREDGRVGTRNYIAVVAASNCAAHAAELIARSYEGVTLPPNVDGVVAFPHGEGCGHA CCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCEECCCCCCEEEEECCCCCCCCC FGPDVDQLRRTLGGVLVHPNVSAALILGLGCEVNQIDHYLGAGSPRTNRLVGMTLQTSGG CCCCHHHHHHHHCCEEECCCCCEEEEEECCCCHHHHHHHHCCCCCCCCEEEEEEEECCCC TPGILAAARREIGRFFEQAAAENRVPVPASKIILGLNCGGSDSFSGITANPALGFCSDLL CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEECCCCCCCCCEECCCHHHHHHHHH AELGAASVLAETPEIFGAEHLLVRRARNREIADKLLGCISRYKKYLSRFDGSFDDNPSPG HHHCHHHHHHCCHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC NKEGGLSNILEKSLGAVAKGGTSPLIDVYEYAEKITAPGFSFMNTPGYDPVSLTGLAAGG CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCC CNLIAFTTGRGSAIGFPTIPVIKISTNTHTYRAMPDNMDINAGAIADGESTIQQTGREIF CEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH HALLAIASGRPTCAERLGHKEFVPWRIGPVM HHHHHHHCCCCHHHHHCCCCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579062; 9384377 [H]