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The map label for this gene is yedY [H]

Identifier: 116620571

GI number: 116620571

Start: 1779695

End: 1780465

Strand: Direct

Name: yedY [H]

Synonym: Acid_1449

Alternate gene names: 116620571

Gene position: 1779695-1780465 (Clockwise)

Preceding gene: 116620570

Following gene: 116620572

Centisome position: 17.86

GC content: 61.35

Gene sequence:

>771_bases
ATGACGCGCGGTAACCGCGATGCGCCTCCCCCTTCACAAACACCGGAACGGGAACTACGCCTTCGCATGCGGCGCGCCTT
CCTGACTCTTGGCGTGGGCGCCGCCGCGGGTTTCGCAGGATGGCGCTGGCTGCGCAGCCGGCCGGAGATCGATGGATTGG
CGCAGCCGTTCCGCCGAATGCTCCAGTTCAACGAGCGCGTCGCGGGGGCTTACTTCGACGAACGCCACCTGGCCGCGGTT
TACCCTGCCTCGGCCATTCAACCGATGCGGACCAATGGAGATATTGGCCTCGGGGACGACTATGACCCACAAAATTGGCG
TCTGGCGATCAAGCCCCTGCCTGGCCGCGGCGAGGTTCGATATCTAACCCTGGCCGACATCCGGGCCTTGCCACAGGTAG
AGCACATTACCCAGCTCAAATGCATCGAGGGCTGGAGCGTCGTGACGCATTGGGCCGGCGCGCGCTTCATGGACTTTACG
GAACAGTTCGCACCCGAATCGAAGTCCGCGCCTTATATAGGAATGCAGACACCCGATGAAGAGTATTTCGTTGGCCTGGA
TCGGGCCAGTGCGATGCACCCTCAAACGCTCCTGTGTTATGAGATGAACGGCGCGCCGCTCACGTTGGAGCACGGCGCTC
CCCTTCGCTTGGCGACACCGGTCAAATACGGTATCAAGAACCTCAAGCGAATCGGCACGATTACCTACAGCACCGAGCGG
CCGAACGATTACTGGGCCGAGCAAGGTTACGACTGGTATGCCGGTATGTAG

Upstream 100 bases:

>100_bases
TTCTTTGCAGTCCACGTTGCGCAAGTGATCAAGGCCGGTTGGAATAACTTCCGCTCGATGGTAGCCGGCTATGAGCTGGT
TTCGGTTGAGGAGCCTTCGC

Downstream 100 bases:

>100_bases
CTGTTCCGGATCGTTCGGGTTATGGACGAAACGCGACATGCGAGAGGCAGCGGATAGGACGGAAATGTTTCGCGTTTCCG
GTGCAAAGGGAAAGGCCAGA

Product: molybdopterin-binding oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MTRGNRDAPPPSQTPERELRLRMRRAFLTLGVGAAAGFAGWRWLRSRPEIDGLAQPFRRMLQFNERVAGAYFDERHLAAV
YPASAIQPMRTNGDIGLGDDYDPQNWRLAIKPLPGRGEVRYLTLADIRALPQVEHITQLKCIEGWSVVTHWAGARFMDFT
EQFAPESKSAPYIGMQTPDEEYFVGLDRASAMHPQTLLCYEMNGAPLTLEHGAPLRLATPVKYGIKNLKRIGTITYSTER
PNDYWAEQGYDWYAGM

Sequences:

>Translated_256_residues
MTRGNRDAPPPSQTPERELRLRMRRAFLTLGVGAAAGFAGWRWLRSRPEIDGLAQPFRRMLQFNERVAGAYFDERHLAAV
YPASAIQPMRTNGDIGLGDDYDPQNWRLAIKPLPGRGEVRYLTLADIRALPQVEHITQLKCIEGWSVVTHWAGARFMDFT
EQFAPESKSAPYIGMQTPDEEYFVGLDRASAMHPQTLLCYEMNGAPLTLEHGAPLRLATPVKYGIKNLKRIGTITYSTER
PNDYWAEQGYDWYAGM
>Mature_255_residues
TRGNRDAPPPSQTPERELRLRMRRAFLTLGVGAAAGFAGWRWLRSRPEIDGLAQPFRRMLQFNERVAGAYFDERHLAAVY
PASAIQPMRTNGDIGLGDDYDPQNWRLAIKPLPGRGEVRYLTLADIRALPQVEHITQLKCIEGWSVVTHWAGARFMDFTE
QFAPESKSAPYIGMQTPDEEYFVGLDRASAMHPQTLLCYEMNGAPLTLEHGAPLRLATPVKYGIKNLKRIGTITYSTERP
NDYWAEQGYDWYAGM

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=152, Percent_Identity=33.5526315789474, Blast_Score=74, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 29034; Mature: 28903

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRGNRDAPPPSQTPERELRLRMRRAFLTLGVGAAAGFAGWRWLRSRPEIDGLAQPFRRM
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LQFNERVAGAYFDERHLAAVYPASAIQPMRTNGDIGLGDDYDPQNWRLAIKPLPGRGEVR
HHHHHHHHCCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEE
YLTLADIRALPQVEHITQLKCIEGWSVVTHWAGARFMDFTEQFAPESKSAPYIGMQTPDE
EEEHHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCCCCCCEECCCCCCH
EYFVGLDRASAMHPQTLLCYEMNGAPLTLEHGAPLRLATPVKYGIKNLKRIGTITYSTER
HHEEECCCCCCCCCCEEEEEECCCCCEEECCCCCEEEECHHHHHHHHHHHHEEEEECCCC
PNDYWAEQGYDWYAGM
CCCHHHHCCCEECCCC
>Mature Secondary Structure 
TRGNRDAPPPSQTPERELRLRMRRAFLTLGVGAAAGFAGWRWLRSRPEIDGLAQPFRRM
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LQFNERVAGAYFDERHLAAVYPASAIQPMRTNGDIGLGDDYDPQNWRLAIKPLPGRGEVR
HHHHHHHHCCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEE
YLTLADIRALPQVEHITQLKCIEGWSVVTHWAGARFMDFTEQFAPESKSAPYIGMQTPDE
EEEHHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCCCCCCEECCCCCCH
EYFVGLDRASAMHPQTLLCYEMNGAPLTLEHGAPLRLATPVKYGIKNLKRIGTITYSTER
HHEEECCCCCCCCCCEEEEEECCCCCEEECCCCCEEEECHHHHHHHHHHHHEEEEECCCC
PNDYWAEQGYDWYAGM
CCCHHHHCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]