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The map label for this gene is arnT [H]

Identifier: 116620560

GI number: 116620560

Start: 1766993

End: 1768465

Strand: Reverse

Name: arnT [H]

Synonym: Acid_1438

Alternate gene names: 116620560

Gene position: 1768465-1766993 (Counterclockwise)

Preceding gene: 116620563

Following gene: 116620559

Centisome position: 17.75

GC content: 66.19

Gene sequence:

>1473_bases
GTGACAGGCCGGGAGGCCTGTCATACTGGGCATGTGGCCAGCAAAATCCCGCGTATTCTTTGGGTGGTTCTGCCGCTGGC
GTACCTGGTTTACTTTTTCGACTTGAGCGCGGCCGGTCTGCTCGGGCCGGACGAACCGCGGTATGCCGCGATCGCGCGGG
AGATGGCGCACAGCGGCGACTGGATCACGCCGCGACTGTGGGGACAGCCGTGGTTTGAGAAGCCGGCGCTGCTGTACTGG
ATGAGCGGCGCGGGTTTCCGGCTGGGATTGGGACCGGAGCTGGCGCCGCGTCTGCCTGGGGCACTGCTTGCGGTCGGGTT
CCTCATCTTCTACTGGTTCGTTTTGCGCCGGGAGTTCGGATGCCGCGTGGCCTGGATGGCGACGCTGATTCTGGGGACCA
GCGGATTCTGGGTCGGGTACAGCCAGAACGGAGTTACGGATATCCCGTTGGCGGCAAGCTATTCGGCGGCAATGCTGCTG
GCGATGCCTTGGGTCGCGAAGCGCGACACGCGGTACCTGCCGTGGGCGGCGGCGATGTTCGGCCTCGCGGTTTTGGCGAA
GGGACTCGTGCCGCTCGTGCTTGCCGCGCCGCTGTTGATGGGACGGCATGTGCGGGACTGGCTGCGTTGGCGGGTGGTGC
TGCCGTTTTTCGCCGTGGCGCTGCCCTGGTACCTTCTGTGCTACTGGCAGAACGGGTGGGGATTCATCCACGAGTTCATC
GTGGTGCACCATTTTTCGCGGGTGACGTCGGACGCGTTGATGCATCAGCGGCCGTGGTGGTTCTACCTGCCGATGCTGGC
GGCAGGGCTATTGCCGTGGTCGCCCCTGCTGGGGCTGGCGGCGAAGCGAACCGGATGGGAAGACCGGCGGCGGCTGTTCC
TGGGCGTGTGGGCGCTGACTGTGCTGGTGCTGTTCTCGATAGCGGTCAATAAGCTGCCGGGCTACATCCTGCCGCTGATG
CCGGCCGCGGCGGCGCTGATGGCGCTGGGACTGGAGGAAGCACGCAGCGCGCGGTGGTGGCTGGCGGTTTGCGCGGGACT
GCTGCTGGCGTTCCCGATTGCGGCGGCGGTTCTGCCGGCGGCGGTACGTACGGGGTTGACGCAGGCGCCGCGGCCGGGTT
TCCAACCGGTCTGGCTGGCAGCGGCGGGGATCGCGGTGCTCACATGGTGGCTCGAATCGCGGGGCCGGCGATTGGCGGCA
GTCGCGGCGGTGGCGGCGGGGGCTGCATTGGGGACGGGATACCTGAAAGCAGTGGCCACGCCGGAGTTGGACCGCTCGGT
CTCGGCGCGCGGCGTGTGGAGACAGGTCGAGGGGAGCAGGGGGGATGTGTGTGTAGGCAACGTGAAGCGCAATTGGGAGT
ACGGGCTGAATTACTACTCAATCACACCGCTACCGAAGTGCGAGCAGAATCCACGGGCGTTGCGCATCGTTCGAGCTCCG
AACGACCGGGTAGTGGTTGAGTCGATACCATAA

Upstream 100 bases:

>100_bases
CCCTGAGCCGGTACTCCTCGCATCATCCGGGAAGCACCCGAAGGGGTGGTGCAGTCCTTGCACCCGGGACGCCCCGCGGG
TCGGCGTCAAACGCTAGCAA

Downstream 100 bases:

>100_bases
AGCATGGTTGACCCGCGGTCCCTGTACGTTGTAACCTCACACTTCCGGTAACCGATTTCATGATTCTGCCTCAAAGTTAT
TCCGCAGTAATGTTTTTGAT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]

Number of amino acids: Translated: 490; Mature: 489

Protein sequence:

>490_residues
MTGREACHTGHVASKIPRILWVVLPLAYLVYFFDLSAAGLLGPDEPRYAAIAREMAHSGDWITPRLWGQPWFEKPALLYW
MSGAGFRLGLGPELAPRLPGALLAVGFLIFYWFVLRREFGCRVAWMATLILGTSGFWVGYSQNGVTDIPLAASYSAAMLL
AMPWVAKRDTRYLPWAAAMFGLAVLAKGLVPLVLAAPLLMGRHVRDWLRWRVVLPFFAVALPWYLLCYWQNGWGFIHEFI
VVHHFSRVTSDALMHQRPWWFYLPMLAAGLLPWSPLLGLAAKRTGWEDRRRLFLGVWALTVLVLFSIAVNKLPGYILPLM
PAAAALMALGLEEARSARWWLAVCAGLLLAFPIAAAVLPAAVRTGLTQAPRPGFQPVWLAAAGIAVLTWWLESRGRRLAA
VAAVAAGAALGTGYLKAVATPELDRSVSARGVWRQVEGSRGDVCVGNVKRNWEYGLNYYSITPLPKCEQNPRALRIVRAP
NDRVVVESIP

Sequences:

>Translated_490_residues
MTGREACHTGHVASKIPRILWVVLPLAYLVYFFDLSAAGLLGPDEPRYAAIAREMAHSGDWITPRLWGQPWFEKPALLYW
MSGAGFRLGLGPELAPRLPGALLAVGFLIFYWFVLRREFGCRVAWMATLILGTSGFWVGYSQNGVTDIPLAASYSAAMLL
AMPWVAKRDTRYLPWAAAMFGLAVLAKGLVPLVLAAPLLMGRHVRDWLRWRVVLPFFAVALPWYLLCYWQNGWGFIHEFI
VVHHFSRVTSDALMHQRPWWFYLPMLAAGLLPWSPLLGLAAKRTGWEDRRRLFLGVWALTVLVLFSIAVNKLPGYILPLM
PAAAALMALGLEEARSARWWLAVCAGLLLAFPIAAAVLPAAVRTGLTQAPRPGFQPVWLAAAGIAVLTWWLESRGRRLAA
VAAVAAGAALGTGYLKAVATPELDRSVSARGVWRQVEGSRGDVCVGNVKRNWEYGLNYYSITPLPKCEQNPRALRIVRAP
NDRVVVESIP
>Mature_489_residues
TGREACHTGHVASKIPRILWVVLPLAYLVYFFDLSAAGLLGPDEPRYAAIAREMAHSGDWITPRLWGQPWFEKPALLYWM
SGAGFRLGLGPELAPRLPGALLAVGFLIFYWFVLRREFGCRVAWMATLILGTSGFWVGYSQNGVTDIPLAASYSAAMLLA
MPWVAKRDTRYLPWAAAMFGLAVLAKGLVPLVLAAPLLMGRHVRDWLRWRVVLPFFAVALPWYLLCYWQNGWGFIHEFIV
VHHFSRVTSDALMHQRPWWFYLPMLAAGLLPWSPLLGLAAKRTGWEDRRRLFLGVWALTVLVLFSIAVNKLPGYILPLMP
AAAALMALGLEEARSARWWLAVCAGLLLAFPIAAAVLPAAVRTGLTQAPRPGFQPVWLAAAGIAVLTWWLESRGRRLAAV
AAVAAGAALGTGYLKAVATPELDRSVSARGVWRQVEGSRGDVCVGNVKRNWEYGLNYYSITPLPKCEQNPRALRIVRAPN
DRVVVESIP

Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 83 family [H]

Homologues:

Organism=Escherichia coli, GI1788591, Length=324, Percent_Identity=33.3333333333333, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022839
- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: =2.4.2.43 [H]

Molecular weight: Translated: 54315; Mature: 54183

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGREACHTGHVASKIPRILWVVLPLAYLVYFFDLSAAGLLGPDEPRYAAIAREMAHSGD
CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
WITPRLWGQPWFEKPALLYWMSGAGFRLGLGPELAPRLPGALLAVGFLIFYWFVLRREFG
CCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHC
CRVAWMATLILGTSGFWVGYSQNGVTDIPLAASYSAAMLLAMPWVAKRDTRYLPWAAAMF
CHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCCCHHHHHH
GLAVLAKGLVPLVLAAPLLMGRHVRDWLRWRVVLPFFAVALPWYLLCYWQNGWGFIHEFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHH
VVHHFSRVTSDALMHQRPWWFYLPMLAAGLLPWSPLLGLAAKRTGWEDRRRLFLGVWALT
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VLVLFSIAVNKLPGYILPLMPAAAALMALGLEEARSARWWLAVCAGLLLAFPIAAAVLPA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVRTGLTQAPRPGFQPVWLAAAGIAVLTWWLESRGRRLAAVAAVAAGAALGTGYLKAVAT
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
PELDRSVSARGVWRQVEGSRGDVCVGNVKRNWEYGLNYYSITPLPKCEQNPRALRIVRAP
CCHHCCCHHHHHHHHCCCCCCCEEECCCCCCHHHCCCEEEECCCCCCCCCCCEEEEEECC
NDRVVVESIP
CCCEEEECCC
>Mature Secondary Structure 
TGREACHTGHVASKIPRILWVVLPLAYLVYFFDLSAAGLLGPDEPRYAAIAREMAHSGD
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
WITPRLWGQPWFEKPALLYWMSGAGFRLGLGPELAPRLPGALLAVGFLIFYWFVLRREFG
CCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHC
CRVAWMATLILGTSGFWVGYSQNGVTDIPLAASYSAAMLLAMPWVAKRDTRYLPWAAAMF
CHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCCCHHHHHH
GLAVLAKGLVPLVLAAPLLMGRHVRDWLRWRVVLPFFAVALPWYLLCYWQNGWGFIHEFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHH
VVHHFSRVTSDALMHQRPWWFYLPMLAAGLLPWSPLLGLAAKRTGWEDRRRLFLGVWALT
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VLVLFSIAVNKLPGYILPLMPAAAALMALGLEEARSARWWLAVCAGLLLAFPIAAAVLPA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVRTGLTQAPRPGFQPVWLAAAGIAVLTWWLESRGRRLAAVAAVAAGAALGTGYLKAVAT
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
PELDRSVSARGVWRQVEGSRGDVCVGNVKRNWEYGLNYYSITPLPKCEQNPRALRIVRAP
CCHHCCCHHHHHHHHCCCCCCCEEECCCCCCHHHCCCEEEECCCCCCCCCCCEEEEEECC
NDRVVVESIP
CCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA