| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is tolB [C]
Identifier: 116620550
GI number: 116620550
Start: 1756088
End: 1758643
Strand: Reverse
Name: tolB [C]
Synonym: Acid_1428
Alternate gene names: 116620550
Gene position: 1758643-1756088 (Counterclockwise)
Preceding gene: 116620551
Following gene: 116620549
Centisome position: 17.65
GC content: 62.83
Gene sequence:
>2556_bases GTGAGCGACATTAAATTAGATTTCCTCAGCAATGAAGCCGTGTCCGGCGAGTTGCTCTCGGAGAGGCTGGCGAGGGGACC CGTCTCAGCCGATGAGACGTTGCGTCTTGCCATTGAAATTGGAGCTGCGCTGCAGAAGGTGCACAACCGCGGGCGGATCC ACGGTCAGATTTCTCCGTTTTGCATCGCGATCACGCAACAGGGCGCGCGCATTCTAAAACCGGCTGCCTCGCCTCAGGAC GCAGCGGCATACCGTGCGCCCGAACAATTGCGGGGCGAAGAACCGGATGTGCGCAGCGACGTATTCTCGTATGGCGCGGT GGTCTATGAGATCGCGAGCGGCCAGCGCGCATTTTCGGGGAGCGGCGCGGAGTTGGCGCAGCGGATCGCGAAGCAGACTC CGGCGGTGCTCGGCGGACAATCGCCGGTTTACTGCACGTTGGAAAAGGTGATCGCAGGCTGCATGGAAAAGGAAGCCGGC CGCCGGCGGCAGCGAGTGCAAAATGCTGTGATCGAGTTGAAGTTGTCGGGCGCGCAGCCGCGCTCCACCGAGCTCGTTTT GCAGCGGCCGATCTACCACGCGCCGTCGCCCTCCCCAATACTAAAAGAAGAAGTGCTGCCTCCGCTGCCTCCGCCTTCGC TGGAGAACGTCGAGGCGATGGCCCCGCCGGTTGCTTTACCGAAGCCGCAGGCGCCAGCCATGCCGCATCCGGCTATCCAT GTCCCACACCCGGCACTTGCGTATGCGGCGCAGGCGAGGGCGGTTTACGGCACGACATTCCGACGGCGTTTCGGAACGAT CGGTGTCGCGATACTGGCACTGGCGGCCACTTCGGTAGCGGCGGTCATCTACCTGAACAAGAAGCCGGCGCCTCCGGTGG TGAAGTTCTCAGTTTCGCAGCCCGAACACACCAGCTACCCCGGAATGCCCTCGGTTTCTCCGGACGGACGCTATCTGACT TTTTCCGCGGTTGGCCCCGAAGGCAAGCGCATGTTGTGGCTGCGTCCGCTGGATGCGCTGCACGCCACGGTAATTCAGGG GTCGGAGGGCGCATCGGCGCCGTTCTGGTCGCCAGATAGCCAGATGATCGCCTTCTTCGGCGGCAAGAACCTGATGAAGG TGCGGATCTCGGGCGGCAGGCCGGAAACGATCTGTCCGGCGGAGGCCATGCCGGGCGGCGGAGCGTGGAACACGGACGGC ACGATTCTATTTTCGCCGAGCCTCTCCGAAGGCTTTTACAAAGTCCCGGCGACGGGCGGCAAGCCGCAACTCGTCTTCAA GCTGGATGAGAGCAAATCCGAGCGCGGCGATGTCTGGCCGCAGTTCCTCCCGGACAGCAAGCATTTCGTGTTCTACCAGC AGACGGACCTGGCGGAGACCTCCGGCGTGTACGCGGGTTCGATGGATCCGCCGGAGTATCACCGGCTATTCGCCAGCCAG ACCAACGCGGTGTATTCGGCTACGGACCCGAATTCGCCGAAGACGGGGCACCTGCTCTACATCAACGAGCGCAACTTGAC GGCGATGGCGTTCAACGCCGGTAAATTGGAAGTCAGCGGTGACCCCATTACGCTGGCGACCGACATAGGCGCGGTGCGCA GCCTGGCGCTGGCGCCGATCTCGGTATCGGCGACCGGCGTATTGGTGTATCAAGGAGTGGGGCAGCCCACGAGACAGATG GTGTGGATGGATCGCAGCGGGAAGCAGATCGCATTGACGGGTGAACCGGGCGAGTGGGGTCCGGGCCGCATTTCTCCGGA CGGAAACCGCGCCGCCGCCGGCAAGCTCGGGCCGGACGGCAGGAATGCGCATCTGTGGCTGCTGGACCTGAGCGGCGCCG CCGAGCCGGTATCGTCGGAATCCGGGCCGCACGAAGGGTCGCCGGTGTGGTCTCCGGACGGCGCGAAGCTCGCGTATTTC GCCAGGCAGGGTGACATCTACGACATTTACTCGCGGTCCGCGCTGCCGGGGAGTCGGCCGGAGCTACTGCTCAAGAGCGA CGTGAACAAGTACCCGACGGACTGGACTCACGATGGCAAGTACCTGATCTATGGCCTCACAGGGCGAGGCACGCATCTCG ATGTTTGGGGCCTTGCGGTTGGCGACCGGCGGTCTGCGCCGATTCTGGATACGGTTTTCTCGGAAGGCTTCGCCTCGGTA TCGCCGGACGGCAAATGGCTGGCTTACCAATCCGATCAATCGGGACGCACTGAGGTCTACGTACAGCAATTCGACGGCTT GAGCAACGGCACCAAGCGGCGATGGATGGTATCGAAGAGCGGCGGATTACCGCGCTGGCGCTCCGATAGCAACGAACTGT TCTATATGACACCCGATGGGAGGATGATGAGCGTTGCGATTCGAATCGGCGCCGATGGCAGCATCGAAGCGGGCGCGCCG CAGCCGCTGTTCCAGACACGCCCGGTTCCCAAGACCTGGAACCTTTACGACGTGTCACCAGACGGGCAGCGCTTCCTGCT CAACCTTCCGCTTGAGTGGACCAGCTCCGCACCCATCACGGTGATCACCAACTGGACCGAAAAGCTCAAAGAGTAG
Upstream 100 bases:
>100_bases CCAAAAGGTTATTGCTGTCGCAAAGGGCTCTTAAGTAAAATCGTTGGACGGAAAGAAATATTCCGGTTTTTCAGTTTGCC GGAAGGAATTGTAAGGGGCC
Downstream 100 bases:
>100_bases TTTATTTTCAACAGCTTAGACGCAACCTGAATAGTGCAGGGCGGGTGATATAATTAAAGAGCACCCCACCTGCACGGAAG AGAGCTTGAAAACCGAAACG
Product: WD40 domain-containing protein
Products: NA
Alternate protein names: Protein Kinase; TPR Repeat-Containing Serine/Threonin Protein Kinase; WD40 Domain-Containing Protein; Serine/Threonine Protein Kinase-Like Protein; Serine/Threonine-Protein Kinase; Serine/Threonine Kinase; PASTA Domain-Containing Serine/Threonine Protein Kinase; Serine-Threonine Protein Kinase; Tyrosine Protein KinaseSerine/Threonine Protein Kinase; Protein Tyrosine Kinase Family; WD-40 Repeat-Containing Serine/Threonin Protein Kinase
Number of amino acids: Translated: 851; Mature: 850
Protein sequence:
>851_residues MSDIKLDFLSNEAVSGELLSERLARGPVSADETLRLAIEIGAALQKVHNRGRIHGQISPFCIAITQQGARILKPAASPQD AAAYRAPEQLRGEEPDVRSDVFSYGAVVYEIASGQRAFSGSGAELAQRIAKQTPAVLGGQSPVYCTLEKVIAGCMEKEAG RRRQRVQNAVIELKLSGAQPRSTELVLQRPIYHAPSPSPILKEEVLPPLPPPSLENVEAMAPPVALPKPQAPAMPHPAIH VPHPALAYAAQARAVYGTTFRRRFGTIGVAILALAATSVAAVIYLNKKPAPPVVKFSVSQPEHTSYPGMPSVSPDGRYLT FSAVGPEGKRMLWLRPLDALHATVIQGSEGASAPFWSPDSQMIAFFGGKNLMKVRISGGRPETICPAEAMPGGGAWNTDG TILFSPSLSEGFYKVPATGGKPQLVFKLDESKSERGDVWPQFLPDSKHFVFYQQTDLAETSGVYAGSMDPPEYHRLFASQ TNAVYSATDPNSPKTGHLLYINERNLTAMAFNAGKLEVSGDPITLATDIGAVRSLALAPISVSATGVLVYQGVGQPTRQM VWMDRSGKQIALTGEPGEWGPGRISPDGNRAAAGKLGPDGRNAHLWLLDLSGAAEPVSSESGPHEGSPVWSPDGAKLAYF ARQGDIYDIYSRSALPGSRPELLLKSDVNKYPTDWTHDGKYLIYGLTGRGTHLDVWGLAVGDRRSAPILDTVFSEGFASV SPDGKWLAYQSDQSGRTEVYVQQFDGLSNGTKRRWMVSKSGGLPRWRSDSNELFYMTPDGRMMSVAIRIGADGSIEAGAP QPLFQTRPVPKTWNLYDVSPDGQRFLLNLPLEWTSSAPITVITNWTEKLKE
Sequences:
>Translated_851_residues MSDIKLDFLSNEAVSGELLSERLARGPVSADETLRLAIEIGAALQKVHNRGRIHGQISPFCIAITQQGARILKPAASPQD AAAYRAPEQLRGEEPDVRSDVFSYGAVVYEIASGQRAFSGSGAELAQRIAKQTPAVLGGQSPVYCTLEKVIAGCMEKEAG RRRQRVQNAVIELKLSGAQPRSTELVLQRPIYHAPSPSPILKEEVLPPLPPPSLENVEAMAPPVALPKPQAPAMPHPAIH VPHPALAYAAQARAVYGTTFRRRFGTIGVAILALAATSVAAVIYLNKKPAPPVVKFSVSQPEHTSYPGMPSVSPDGRYLT FSAVGPEGKRMLWLRPLDALHATVIQGSEGASAPFWSPDSQMIAFFGGKNLMKVRISGGRPETICPAEAMPGGGAWNTDG TILFSPSLSEGFYKVPATGGKPQLVFKLDESKSERGDVWPQFLPDSKHFVFYQQTDLAETSGVYAGSMDPPEYHRLFASQ TNAVYSATDPNSPKTGHLLYINERNLTAMAFNAGKLEVSGDPITLATDIGAVRSLALAPISVSATGVLVYQGVGQPTRQM VWMDRSGKQIALTGEPGEWGPGRISPDGNRAAAGKLGPDGRNAHLWLLDLSGAAEPVSSESGPHEGSPVWSPDGAKLAYF ARQGDIYDIYSRSALPGSRPELLLKSDVNKYPTDWTHDGKYLIYGLTGRGTHLDVWGLAVGDRRSAPILDTVFSEGFASV SPDGKWLAYQSDQSGRTEVYVQQFDGLSNGTKRRWMVSKSGGLPRWRSDSNELFYMTPDGRMMSVAIRIGADGSIEAGAP QPLFQTRPVPKTWNLYDVSPDGQRFLLNLPLEWTSSAPITVITNWTEKLKE >Mature_850_residues SDIKLDFLSNEAVSGELLSERLARGPVSADETLRLAIEIGAALQKVHNRGRIHGQISPFCIAITQQGARILKPAASPQDA AAYRAPEQLRGEEPDVRSDVFSYGAVVYEIASGQRAFSGSGAELAQRIAKQTPAVLGGQSPVYCTLEKVIAGCMEKEAGR RRQRVQNAVIELKLSGAQPRSTELVLQRPIYHAPSPSPILKEEVLPPLPPPSLENVEAMAPPVALPKPQAPAMPHPAIHV PHPALAYAAQARAVYGTTFRRRFGTIGVAILALAATSVAAVIYLNKKPAPPVVKFSVSQPEHTSYPGMPSVSPDGRYLTF SAVGPEGKRMLWLRPLDALHATVIQGSEGASAPFWSPDSQMIAFFGGKNLMKVRISGGRPETICPAEAMPGGGAWNTDGT ILFSPSLSEGFYKVPATGGKPQLVFKLDESKSERGDVWPQFLPDSKHFVFYQQTDLAETSGVYAGSMDPPEYHRLFASQT NAVYSATDPNSPKTGHLLYINERNLTAMAFNAGKLEVSGDPITLATDIGAVRSLALAPISVSATGVLVYQGVGQPTRQMV WMDRSGKQIALTGEPGEWGPGRISPDGNRAAAGKLGPDGRNAHLWLLDLSGAAEPVSSESGPHEGSPVWSPDGAKLAYFA RQGDIYDIYSRSALPGSRPELLLKSDVNKYPTDWTHDGKYLIYGLTGRGTHLDVWGLAVGDRRSAPILDTVFSEGFASVS PDGKWLAYQSDQSGRTEVYVQQFDGLSNGTKRRWMVSKSGGLPRWRSDSNELFYMTPDGRMMSVAIRIGADGSIEAGAPQ PLFQTRPVPKTWNLYDVSPDGQRFLLNLPLEWTSSAPITVITNWTEKLKE
Specific function: Involved In The Tonb-Independent Uptake Of Group A Colicins (Colicins A, E1, E2, E3 And K). Necessary For The Colicins To Reach Their Respective Targets After Initial Binding To The Bacteria. [C]
COG id: COG0515
COG function: function code RTKL; Serine/threonine protein kinase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91836; Mature: 91705
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIKLDFLSNEAVSGELLSERLARGPVSADETLRLAIEIGAALQKVHNRGRIHGQISPF CCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHCCCEEECCCCE CIAITQQGARILKPAASPQDAAAYRAPEQLRGEEPDVRSDVFSYGAVVYEIASGQRAFSG EEEEECCCCEEECCCCCCCHHHHHCCCHHHCCCCCCHHHHHHHHCEEEEEECCCCEECCC SGAELAQRIAKQTPAVLGGQSPVYCTLEKVIAGCMEKEAGRRRQRVQNAVIELKLSGAQP CCHHHHHHHHHHCCCEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCC RSTELVLQRPIYHAPSPSPILKEEVLPPLPPPSLENVEAMAPPVALPKPQAPAMPHPAIH CCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEE VPHPALAYAAQARAVYGTTFRRRFGTIGVAILALAATSVAAVIYLNKKPAPPVVKFSVSQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCEEEEECCC PEHTSYPGMPSVSPDGRYLTFSAVGPEGKRMLWLRPLDALHATVIQGSEGASAPFWSPDS CCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCHHHHEEEEEECCCCCCCCCCCCCC QMIAFFGGKNLMKVRISGGRPETICPAEAMPGGGAWNTDGTILFSPSLSEGFYKVPATGG CEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCC KPQLVFKLDESKSERGDVWPQFLPDSKHFVFYQQTDLAETSGVYAGSMDPPEYHRLFASQ CCEEEEEECCCCCCCCCCCHHHCCCCCCEEEEEECCCCHHCCEEECCCCCHHHHHHHHHC TNAVYSATDPNSPKTGHLLYINERNLTAMAFNAGKLEVSGDPITLATDIGAVRSLALAPI CCEEEECCCCCCCCCCEEEEEECCCEEEEEEECCEEEECCCCEEEEECHHHHHHHHCCCE SVSATGVLVYQGVGQPTRQMVWMDRSGKQIALTGEPGEWGPGRISPDGNRAAAGKLGPDG EECCCEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCC RNAHLWLLDLSGAAEPVSSESGPHEGSPVWSPDGAKLAYFARQGDIYDIYSRSALPGSRP CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCC ELLLKSDVNKYPTDWTHDGKYLIYGLTGRGTHLDVWGLAVGDRRSAPILDTVFSEGFASV CEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHCCCCCC SPDGKWLAYQSDQSGRTEVYVQQFDGLSNGTKRRWMVSKSGGLPRWRSDSNELFYMTPDG CCCCCEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCC RMMSVAIRIGADGSIEAGAPQPLFQTRPVPKTWNLYDVSPDGQRFLLNLPLEWTSSAPIT CEEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCEE VITNWTEKLKE EEECCHHHHCC >Mature Secondary Structure SDIKLDFLSNEAVSGELLSERLARGPVSADETLRLAIEIGAALQKVHNRGRIHGQISPF CCEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHCCCEEECCCCE CIAITQQGARILKPAASPQDAAAYRAPEQLRGEEPDVRSDVFSYGAVVYEIASGQRAFSG EEEEECCCCEEECCCCCCCHHHHHCCCHHHCCCCCCHHHHHHHHCEEEEEECCCCEECCC SGAELAQRIAKQTPAVLGGQSPVYCTLEKVIAGCMEKEAGRRRQRVQNAVIELKLSGAQP CCHHHHHHHHHHCCCEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCC RSTELVLQRPIYHAPSPSPILKEEVLPPLPPPSLENVEAMAPPVALPKPQAPAMPHPAIH CCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEE VPHPALAYAAQARAVYGTTFRRRFGTIGVAILALAATSVAAVIYLNKKPAPPVVKFSVSQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCEEEEECCC PEHTSYPGMPSVSPDGRYLTFSAVGPEGKRMLWLRPLDALHATVIQGSEGASAPFWSPDS CCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCHHHHEEEEEECCCCCCCCCCCCCC QMIAFFGGKNLMKVRISGGRPETICPAEAMPGGGAWNTDGTILFSPSLSEGFYKVPATGG CEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCC KPQLVFKLDESKSERGDVWPQFLPDSKHFVFYQQTDLAETSGVYAGSMDPPEYHRLFASQ CCEEEEEECCCCCCCCCCCHHHCCCCCCEEEEEECCCCHHCCEEECCCCCHHHHHHHHHC TNAVYSATDPNSPKTGHLLYINERNLTAMAFNAGKLEVSGDPITLATDIGAVRSLALAPI CCEEEECCCCCCCCCCEEEEEECCCEEEEEEECCEEEECCCCEEEEECHHHHHHHHCCCE SVSATGVLVYQGVGQPTRQMVWMDRSGKQIALTGEPGEWGPGRISPDGNRAAAGKLGPDG EECCCEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCC RNAHLWLLDLSGAAEPVSSESGPHEGSPVWSPDGAKLAYFARQGDIYDIYSRSALPGSRP CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCC ELLLKSDVNKYPTDWTHDGKYLIYGLTGRGTHLDVWGLAVGDRRSAPILDTVFSEGFASV CEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHCCCCCC SPDGKWLAYQSDQSGRTEVYVQQFDGLSNGTKRRWMVSKSGGLPRWRSDSNELFYMTPDG CCCCCEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCC RMMSVAIRIGADGSIEAGAPQPLFQTRPVPKTWNLYDVSPDGQRFLLNLPLEWTSSAPIT CEEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCEE VITNWTEKLKE EEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA